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  5. SOLTUB.AGRIA.G00000012168

SOLTUB.AGRIA.G00000012168


Description : Calcium-binding EF hand family protein


Gene families : OG_02_0013844 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012168
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_6


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005773 vacuole IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0009409 response to cold IEA AHRD
BP GO:0010091 trichome branching IEA AHRD
CC GO:0031303 integral component of endosome membrane IEA AHRD
BP GO:0046686 response to cadmium ion IEA AHRD
BP GO:1900425 negative regulation of defense response to bacterium IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0001508 action potential IEP Predict GO terms from Neighborhoods
BP GO:0001523 retinoid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0001669 acrosomal vesicle IEP Predict GO terms from Neighborhoods
MF GO:0001758 retinal dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0002027 regulation of heart rate IEP Predict GO terms from Neighborhoods
BP GO:0002028 regulation of sodium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0002215 defense response to nematode IEP Predict GO terms from Neighborhoods
BP GO:0002501 peptide antigen assembly with MHC protein complex IEP Predict GO terms from Neighborhoods
BP GO:0002502 peptide antigen assembly with MHC class I protein complex IEP Predict GO terms from Neighborhoods
BP GO:0002682 regulation of immune system process IEP Predict GO terms from Neighborhoods
BP GO:0002684 positive regulation of immune system process IEP Predict GO terms from Neighborhoods
BP GO:0002685 regulation of leukocyte migration IEP Predict GO terms from Neighborhoods
BP GO:0002687 positive regulation of leukocyte migration IEP Predict GO terms from Neighborhoods
BP GO:0002688 regulation of leukocyte chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0002690 positive regulation of leukocyte chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0002833 positive regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
MF GO:0004029 aldehyde dehydrogenase (NAD+) activity IEP Predict GO terms from Neighborhoods
MF GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
MF GO:0005178 integrin binding IEP Predict GO terms from Neighborhoods
CC GO:0005788 endoplasmic reticulum lumen IEP Predict GO terms from Neighborhoods
CC GO:0005790 smooth endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0005844 polysome IEP Predict GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006076 (1->3)-beta-D-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006577 amino-acid betaine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006578 amino-acid betaine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006611 protein export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006911 phagocytosis, engulfment IEP Predict GO terms from Neighborhoods
BP GO:0006937 regulation of muscle contraction IEP Predict GO terms from Neighborhoods
BP GO:0006942 regulation of striated muscle contraction IEP Predict GO terms from Neighborhoods
BP GO:0007009 plasma membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0007267 cell-cell signaling IEP Predict GO terms from Neighborhoods
BP GO:0007409 axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0008016 regulation of heart contraction IEP Predict GO terms from Neighborhoods
MF GO:0008422 beta-glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008802 betaine-aldehyde dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0009251 glucan catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0009516 leucoplast IEP Predict GO terms from Neighborhoods
CC GO:0009897 external side of plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0009925 basal plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0010226 response to lithium ion IEP Predict GO terms from Neighborhoods
BP GO:0010262 somatic embryogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010324 membrane invagination IEP Predict GO terms from Neighborhoods
BP GO:0010594 regulation of endothelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010595 positive regulation of endothelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010632 regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010634 positive regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010765 positive regulation of sodium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0010770 positive regulation of cell morphogenesis involved in differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010810 regulation of cell-substrate adhesion IEP Predict GO terms from Neighborhoods
BP GO:0010811 positive regulation of cell-substrate adhesion IEP Predict GO terms from Neighborhoods
BP GO:0010882 regulation of cardiac muscle contraction by calcium ion signaling IEP Predict GO terms from Neighborhoods
CC GO:0016529 sarcoplasmic reticulum IEP Predict GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016922 nuclear receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0019285 glycine betaine biosynthetic process from choline IEP Predict GO terms from Neighborhoods
BP GO:0019695 choline metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Predict GO terms from Neighborhoods
CC GO:0030017 sarcomere IEP Predict GO terms from Neighborhoods
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
BP GO:0030336 negative regulation of cell migration IEP Predict GO terms from Neighborhoods
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP Predict GO terms from Neighborhoods
CC GO:0030496 midbody IEP Predict GO terms from Neighborhoods
BP GO:0030866 cortical actin cytoskeleton organization IEP Predict GO terms from Neighborhoods
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0031349 positive regulation of defense response IEP Predict GO terms from Neighborhoods
BP GO:0031455 glycine betaine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031456 glycine betaine biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Predict GO terms from Neighborhoods
BP GO:0032103 positive regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032355 response to estradiol IEP Predict GO terms from Neighborhoods
BP GO:0032411 positive regulation of transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0032414 positive regulation of ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEP Predict GO terms from Neighborhoods
BP GO:0033143 regulation of intracellular steroid hormone receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0033144 negative regulation of intracellular steroid hormone receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Predict GO terms from Neighborhoods
BP GO:0033574 response to testosterone IEP Predict GO terms from Neighborhoods
BP GO:0034059 response to anoxia IEP Predict GO terms from Neighborhoods
BP GO:0035051 cardiocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0040013 negative regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0040020 regulation of meiotic nuclear division IEP Predict GO terms from Neighborhoods
CC GO:0042383 sarcolemma IEP Predict GO terms from Neighborhoods
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0042562 hormone binding IEP Predict GO terms from Neighborhoods
BP GO:0042692 muscle cell differentiation IEP Predict GO terms from Neighborhoods
CC GO:0042824 MHC class I peptide loading complex IEP Predict GO terms from Neighborhoods
MF GO:0042973 glucan endo-1,3-beta-D-glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Predict GO terms from Neighborhoods
BP GO:0044247 cellular polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0044304 main axon IEP Predict GO terms from Neighborhoods
CC GO:0044322 endoplasmic reticulum quality control compartment IEP Predict GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predict GO terms from Neighborhoods
BP GO:0045088 regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0045089 positive regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0045664 regulation of neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045665 negative regulation of neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045785 positive regulation of cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:0046287 isoflavonoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048385 regulation of retinoic acid receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0048387 negative regulation of retinoic acid receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0050681 nuclear androgen receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0050764 regulation of phagocytosis IEP Predict GO terms from Neighborhoods
BP GO:0050766 positive regulation of phagocytosis IEP Predict GO terms from Neighborhoods
BP GO:0050776 regulation of immune response IEP Predict GO terms from Neighborhoods
BP GO:0050778 positive regulation of immune response IEP Predict GO terms from Neighborhoods
BP GO:0050808 synapse organization IEP Predict GO terms from Neighborhoods
MF GO:0050839 cell adhesion molecule binding IEP Predict GO terms from Neighborhoods
BP GO:0050920 regulation of chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0050921 positive regulation of chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0051050 positive regulation of transport IEP Predict GO terms from Neighborhoods
BP GO:0051146 striated muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0051275 beta-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051279 regulation of release of sequestered calcium ion into cytosol IEP Predict GO terms from Neighborhoods
BP GO:0051282 regulation of sequestering of calcium ion IEP Predict GO terms from Neighborhoods
BP GO:0051410 detoxification of nitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:0051445 regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0055007 cardiac muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0055117 regulation of cardiac muscle contraction IEP Predict GO terms from Neighborhoods
CC GO:0060473 cortical granule IEP Predict GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Predict GO terms from Neighborhoods
CC GO:0062023 collagen-containing extracellular matrix IEP Predict GO terms from Neighborhoods
BP GO:0070458 cellular detoxification of nitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:0070887 cellular response to chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071285 cellular response to lithium ion IEP Predict GO terms from Neighborhoods
BP GO:0071454 cellular response to anoxia IEP Predict GO terms from Neighborhoods
CC GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0071675 regulation of mononuclear cell migration IEP Predict GO terms from Neighborhoods
BP GO:0071677 positive regulation of mononuclear cell migration IEP Predict GO terms from Neighborhoods
CC GO:0071682 endocytic vesicle lumen IEP Predict GO terms from Neighborhoods
BP GO:0086001 cardiac muscle cell action potential IEP Predict GO terms from Neighborhoods
BP GO:0086002 cardiac muscle cell action potential involved in contraction IEP Predict GO terms from Neighborhoods
BP GO:0086004 regulation of cardiac muscle cell contraction IEP Predict GO terms from Neighborhoods
BP GO:0086019 cell-cell signaling involved in cardiac conduction IEP Predict GO terms from Neighborhoods
BP GO:0086065 cell communication involved in cardiac conduction IEP Predict GO terms from Neighborhoods
BP GO:0086066 atrial cardiac muscle cell to AV node cell communication IEP Predict GO terms from Neighborhoods
BP GO:0086070 SA node cell to atrial cardiac muscle cell communication IEP Predict GO terms from Neighborhoods
BP GO:0090257 regulation of muscle system process IEP Predict GO terms from Neighborhoods
BP GO:0090398 cellular senescence IEP Predict GO terms from Neighborhoods
BP GO:0097164 ammonium ion metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0098794 postsynapse IEP Predict GO terms from Neighborhoods
BP GO:0098900 regulation of action potential IEP Predict GO terms from Neighborhoods
BP GO:0098901 regulation of cardiac muscle cell action potential IEP Predict GO terms from Neighborhoods
BP GO:0099024 plasma membrane invagination IEP Predict GO terms from Neighborhoods
BP GO:1900024 regulation of substrate adhesion-dependent cell spreading IEP Predict GO terms from Neighborhoods
BP GO:1900026 positive regulation of substrate adhesion-dependent cell spreading IEP Predict GO terms from Neighborhoods
BP GO:1901016 regulation of potassium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901163 regulation of trophoblast cell migration IEP Predict GO terms from Neighborhoods
BP GO:1901164 negative regulation of trophoblast cell migration IEP Predict GO terms from Neighborhoods
BP GO:1901222 regulation of NIK/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:1901224 positive regulation of NIK/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:1901379 regulation of potassium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903115 regulation of actin filament-based movement IEP Predict GO terms from Neighborhoods
BP GO:1903169 regulation of calcium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903522 regulation of blood circulation IEP Predict GO terms from Neighborhoods
BP GO:1904064 positive regulation of cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:2000146 negative regulation of cell motility IEP Predict GO terms from Neighborhoods
BP GO:2000508 regulation of dendritic cell chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:2000510 positive regulation of dendritic cell chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:2001257 regulation of cation channel activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 128 193
IPR011992 EF-hand-dom_pair 97 192
No external refs found!