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  5. SOLTUB.AGRIA.G00000012463

SOLTUB.AGRIA.G00000012463


Description : Chaperone protein dnaJ


Gene families : OG_02_0013907 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012463
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_254


Type GO Term Name Evidence Source
MF GO:0005488 binding IEA AHRD
BP GO:0006457 protein folding IEA AHRD
CC GO:0009535 chloroplast thylakoid membrane IEA AHRD
CC GO:0009941 chloroplast envelope IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predict GO terms from Neighborhoods
CC GO:0000172 ribonuclease MRP complex IEP Predict GO terms from Neighborhoods
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0000966 RNA 5'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0001172 RNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0001514 selenocysteine incorporation IEP Predict GO terms from Neighborhoods
BP GO:0001682 tRNA 5'-leader removal IEP Predict GO terms from Neighborhoods
BP GO:0001959 regulation of cytokine-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0001960 negative regulation of cytokine-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002683 negative regulation of immune system process IEP Predict GO terms from Neighborhoods
BP GO:0002832 negative regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
MF GO:0003678 DNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0003727 single-stranded RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004532 exoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004540 ribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005347 ATP transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Predict GO terms from Neighborhoods
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
CC GO:0005743 mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Predict GO terms from Neighborhoods
BP GO:0006451 translational readthrough IEP Predict GO terms from Neighborhoods
BP GO:0006816 calcium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006851 mitochondrial calcium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0006862 nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0006874 cellular calcium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0006875 cellular metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0007005 mitochondrion organization IEP Predict GO terms from Neighborhoods
BP GO:0007006 mitochondrial membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Predict GO terms from Neighborhoods
MF GO:0008143 poly(A) binding IEP Predict GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008242 omega peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008514 organic anion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009528 plastid inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0009706 chloroplast inner membrane IEP Predict GO terms from Neighborhoods
BP GO:0010090 trichome morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010091 trichome branching IEP Predict GO terms from Neighborhoods
BP GO:0010193 response to ozone IEP Predict GO terms from Neighborhoods
CC GO:0010494 cytoplasmic stress granule IEP Predict GO terms from Neighborhoods
BP GO:0010506 regulation of autophagy IEP Predict GO terms from Neighborhoods
BP GO:0010508 positive regulation of autophagy IEP Predict GO terms from Neighborhoods
BP GO:0010941 regulation of cell death IEP Predict GO terms from Neighborhoods
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015748 organophosphate ester transport IEP Predict GO terms from Neighborhoods
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015865 purine nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0015866 ADP transport IEP Predict GO terms from Neighborhoods
BP GO:0015867 ATP transport IEP Predict GO terms from Neighborhoods
BP GO:0015868 purine ribonucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Predict GO terms from Neighborhoods
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0016032 viral process IEP Predict GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0018995 host cellular component IEP Predict GO terms from Neighborhoods
BP GO:0019048 modulation by virus of host process IEP Predict GO terms from Neighborhoods
BP GO:0019049 mitigation of host antiviral defense response IEP Predict GO terms from Neighborhoods
BP GO:0019054 modulation by virus of host cellular process IEP Predict GO terms from Neighborhoods
BP GO:0019079 viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0019082 viral protein processing IEP Predict GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Predict GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0030430 host cell cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0030682 mitigation of host defenses by symbiont IEP Predict GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Predict GO terms from Neighborhoods
CC GO:0031969 chloroplast membrane IEP Predict GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Predict GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Predict GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0033097 amyloplast membrane IEP Predict GO terms from Neighborhoods
CC GO:0033098 amyloplast inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0033643 host cell part IEP Predict GO terms from Neighborhoods
CC GO:0033644 host cell membrane IEP Predict GO terms from Neighborhoods
CC GO:0033646 host intracellular part IEP Predict GO terms from Neighborhoods
CC GO:0033647 host intracellular organelle IEP Predict GO terms from Neighborhoods
CC GO:0033648 host intracellular membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0033655 host cell cytoplasm part IEP Predict GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Predict GO terms from Neighborhoods
BP GO:0034063 stress granule assembly IEP Predict GO terms from Neighborhoods
BP GO:0034599 cellular response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0034605 cellular response to heat IEP Predict GO terms from Neighborhoods
CC GO:0035770 ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
BP GO:0035821 modulation of process of another organism IEP Predict GO terms from Neighborhoods
BP GO:0036444 calcium import into the mitochondrion IEP Predict GO terms from Neighborhoods
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
BP GO:0039502 suppression by virus of host type I interferon-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0039503 suppression by virus of host innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0039519 modulation by virus of host autophagy IEP Predict GO terms from Neighborhoods
BP GO:0039520 induction by virus of host autophagy IEP Predict GO terms from Neighborhoods
BP GO:0039537 suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0039548 suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity IEP Predict GO terms from Neighborhoods
BP GO:0039579 suppression by virus of host ISG15-protein conjugation IEP Predict GO terms from Neighborhoods
BP GO:0039595 induction by virus of catabolism of host mRNA IEP Predict GO terms from Neighborhoods
BP GO:0039644 suppression by virus of host NF-kappaB cascade IEP Predict GO terms from Neighborhoods
BP GO:0039648 modulation by virus of host protein ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0039656 modulation by virus of host gene expression IEP Predict GO terms from Neighborhoods
BP GO:0039657 suppression by virus of host gene expression IEP Predict GO terms from Neighborhoods
BP GO:0044003 modulation by symbiont of host process IEP Predict GO terms from Neighborhoods
BP GO:0044068 modulation by symbiont of host cellular process IEP Predict GO terms from Neighborhoods
CC GO:0044172 host cell endoplasmic reticulum-Golgi intermediate compartment IEP Predict GO terms from Neighborhoods
CC GO:0044220 host cell perinuclear region of cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0044414 suppression of host defenses by symbiont IEP Predict GO terms from Neighborhoods
BP GO:0044501 modulation of signal transduction in another organism IEP Predict GO terms from Neighborhoods
BP GO:0045824 negative regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0050657 nucleic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0050658 RNA transport IEP Predict GO terms from Neighborhoods
BP GO:0050777 negative regulation of immune response IEP Predict GO terms from Neighborhoods
BP GO:0051028 mRNA transport IEP Predict GO terms from Neighborhoods
BP GO:0051236 establishment of RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0051282 regulation of sequestering of calcium ion IEP Predict GO terms from Neighborhoods
BP GO:0051503 adenine nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0051560 mitochondrial calcium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0051561 positive regulation of mitochondrial calcium ion concentration IEP Predict GO terms from Neighborhoods
BP GO:0051592 response to calcium ion IEP Predict GO terms from Neighborhoods
BP GO:0051701 biological process involved in interaction with host IEP Predict GO terms from Neighborhoods
BP GO:0052027 modulation by symbiont of host signal transduction pathway IEP Predict GO terms from Neighborhoods
BP GO:0052029 suppression by symbiont of host signal transduction pathway IEP Predict GO terms from Neighborhoods
BP GO:0052031 modulation by symbiont of host defense response IEP Predict GO terms from Neighborhoods
BP GO:0052040 modulation by symbiont of host programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0052167 modulation by symbiont of host innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0052170 suppression by symbiont of host innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0052173 response to defenses of other organism IEP Predict GO terms from Neighborhoods
BP GO:0052200 response to host defenses IEP Predict GO terms from Neighborhoods
BP GO:0052553 modulation by symbiont of host immune response IEP Predict GO terms from Neighborhoods
BP GO:0052562 suppression by symbiont of host immune response IEP Predict GO terms from Neighborhoods
BP GO:0052572 response to host immune response IEP Predict GO terms from Neighborhoods
BP GO:0055074 calcium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060338 regulation of type I interferon-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0060339 negative regulation of type I interferon-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0060759 regulation of response to cytokine stimulus IEP Predict GO terms from Neighborhoods
BP GO:0060761 negative regulation of response to cytokine stimulus IEP Predict GO terms from Neighborhoods
BP GO:0061013 regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061014 positive regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0070588 calcium ion transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0070717 poly-purine tract binding IEP Predict GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Predict GO terms from Neighborhoods
BP GO:0071241 cellular response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0071248 cellular response to metal ion IEP Predict GO terms from Neighborhoods
BP GO:0071277 cellular response to calcium ion IEP Predict GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Predict GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Predict GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0072507 divalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0072530 purine-containing compound transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0075044 positive regulation by symbiont of host autophagy IEP Predict GO terms from Neighborhoods
BP GO:0075071 modulation by symbiont of host autophagy IEP Predict GO terms from Neighborhoods
BP GO:0075109 modulation by symbiont of host receptor-mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0075111 suppression by symbiont of host receptor-mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0075112 modulation by symbiont of host transmembrane receptor-mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0075114 suppression by symbiont of host transmembrane receptor-mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0075136 response to host IEP Predict GO terms from Neighborhoods
BP GO:0075528 modulation by virus of host immune response IEP Predict GO terms from Neighborhoods
BP GO:0080134 regulation of response to stress IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090480 purine nucleotide-sugar transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0097274 urea homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0097659 nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Predict GO terms from Neighborhoods
BP GO:0099116 tRNA 5'-end processing IEP Predict GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:0106049 regulation of cellular response to osmotic stress IEP Predict GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Predict GO terms from Neighborhoods
MF GO:0140603 obsolete ATP hydrolysis activity IEP Predict GO terms from Neighborhoods
BP GO:0140694 non-membrane-bounded organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1900069 regulation of cellular hyperosmotic salinity response IEP Predict GO terms from Neighborhoods
BP GO:1901000 regulation of response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:1901264 carbohydrate derivative transport IEP Predict GO terms from Neighborhoods
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901679 nucleotide transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:1902555 endoribonuclease complex IEP Predict GO terms from Neighborhoods
BP GO:1903311 regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903313 positive regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1904092 regulation of autophagic cell death IEP Predict GO terms from Neighborhoods
CC GO:1905348 endonuclease complex IEP Predict GO terms from Neighborhoods
BP GO:1990542 mitochondrial transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001305 HSP_DnaJ_Cys-rich_dom 220 284
IPR036410 HSP_DnaJ_Cys-rich_dom_sf 207 287
IPR008971 HSP40/DnaJ_pept-bd 188 344
IPR001623 DnaJ_domain 71 132
IPR002939 DnaJ_C 193 411
IPR008971 HSP40/DnaJ_pept-bd 338 422
IPR036869 J_dom_sf 67 179
No external refs found!