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  5. SOLTUB.AGRIA.G00000012576

SOLTUB.AGRIA.G00000012576


Description : 50S ribosomal protein L14


Gene families : OG_02_0003640 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012576
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_261


Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA AHRD
CC GO:0005762 mitochondrial large ribosomal subunit IEA AHRD
BP GO:0009553 embryo sac development IEA AHRD
BP GO:0009741 response to brassinosteroid IEA AHRD
BP GO:0060548 negative regulation of cell death IEA AHRD
MF GO:0070180 large ribosomal subunit rRNA binding IEA AHRD
BP GO:0080060 integument development IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0000014 single-stranded DNA endodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0000077 DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0000429 carbon catabolite regulation of transcription from RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0000436 carbon catabolite activation of transcription from RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0000723 telomere maintenance IEP Predict GO terms from Neighborhoods
BP GO:0000724 double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0000727 double-strand break repair via break-induced replication IEP Predict GO terms from Neighborhoods
BP GO:0000729 DNA double-strand break processing IEP Predict GO terms from Neighborhoods
CC GO:0000781 chromosome, telomeric region IEP Predict GO terms from Neighborhoods
CC GO:0000791 euchromatin IEP Predict GO terms from Neighborhoods
CC GO:0000795 synaptonemal complex IEP Predict GO terms from Neighborhoods
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP Predict GO terms from Neighborhoods
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IEP Predict GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003691 double-stranded telomeric DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004017 adenylate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004520 endodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004521 endoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Predict GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004529 exodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004536 deoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004540 ribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0005381 iron ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005643 nuclear pore IEP Predict GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predict GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006405 RNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006606 protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006842 tricarboxylic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0006879 cellular iron ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007095 mitotic G2 DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007129 homologous chromosome pairing at meiosis IEP Predict GO terms from Neighborhoods
BP GO:0007417 central nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0007507 heart development IEP Predict GO terms from Neighborhoods
BP GO:0008283 cell population proliferation IEP Predict GO terms from Neighborhoods
MF GO:0008296 3'-5'-exodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0008544 epidermis development IEP Predict GO terms from Neighborhoods
BP GO:0009616 RNAi-mediated antiviral immune response IEP Predict GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010044 response to aluminum ion IEP Predict GO terms from Neighborhoods
BP GO:0010099 regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0010422 regulation of brassinosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010677 negative regulation of cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010780 meiotic DNA double-strand break formation involved in reciprocal meiotic recombination IEP Predict GO terms from Neighborhoods
BP GO:0010791 DNA double-strand break processing involved in repair via synthesis-dependent strand annealing IEP Predict GO terms from Neighborhoods
BP GO:0010893 positive regulation of steroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010972 negative regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0014013 regulation of gliogenesis IEP Predict GO terms from Neighborhoods
MF GO:0015137 citrate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015142 tricarboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015746 citrate transport IEP Predict GO terms from Neighborhoods
BP GO:0016441 post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
CC GO:0016602 CCAAT-binding factor complex IEP Predict GO terms from Neighborhoods
CC GO:0016605 PML body IEP Predict GO terms from Neighborhoods
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0017056 structural constituent of nuclear pore IEP Predict GO terms from Neighborhoods
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0019218 regulation of steroid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0022413 reproductive process in single-celled organism IEP Predict GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Predict GO terms from Neighborhoods
BP GO:0030422 siRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0030435 sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
BP GO:0030437 ascospore formation IEP Predict GO terms from Neighborhoods
CC GO:0030870 Mre11 complex IEP Predict GO terms from Neighborhoods
BP GO:0031570 DNA integrity checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0031573 mitotic intra-S DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0031669 cellular response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0031670 cellular response to nutrient IEP Predict GO terms from Neighborhoods
BP GO:0032200 telomere organization IEP Predict GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032352 positive regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0035194 post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0035196 miRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0035618 root hair IEP Predict GO terms from Neighborhoods
BP GO:0035753 maintenance of DNA trinucleotide repeats IEP Predict GO terms from Neighborhoods
CC GO:0035861 site of double-strand break IEP Predict GO terms from Neighborhoods
BP GO:0042138 meiotic DNA double-strand break formation IEP Predict GO terms from Neighborhoods
MF GO:0042162 telomeric DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0042770 signal transduction in response to DNA damage IEP Predict GO terms from Neighborhoods
BP GO:0042779 tRNA 3'-trailer cleavage IEP Predict GO terms from Neighborhoods
MF GO:0042781 3'-tRNA processing endoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0043047 single-stranded telomeric DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0043457 regulation of cellular respiration IEP Predict GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0043570 maintenance of DNA repeat elements IEP Predict GO terms from Neighborhoods
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
BP GO:0043935 sexual sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
CC GO:0044611 nuclear pore inner ring IEP Predict GO terms from Neighborhoods
BP GO:0044773 mitotic DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0044774 mitotic DNA integrity checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0044818 mitotic G2/M transition checkpoint IEP Predict GO terms from Neighborhoods
BP GO:0045824 negative regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0045912 negative regulation of carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045940 positive regulation of steroid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045990 carbon catabolite regulation of transcription IEP Predict GO terms from Neighborhoods
BP GO:0045991 carbon catabolite activation of transcription IEP Predict GO terms from Neighborhoods
BP GO:0046596 regulation of viral entry into host cell IEP Predict GO terms from Neighborhoods
BP GO:0046597 negative regulation of viral entry into host cell IEP Predict GO terms from Neighborhoods
BP GO:0046885 regulation of hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046886 positive regulation of hormone biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0048444 floral organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048446 petal morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048468 cell development IEP Predict GO terms from Neighborhoods
BP GO:0048525 negative regulation of viral process IEP Predict GO terms from Neighborhoods
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048582 positive regulation of post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0048666 neuron development IEP Predict GO terms from Neighborhoods
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0050792 regulation of viral process IEP Predict GO terms from Neighborhoods
BP GO:0050810 regulation of steroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051037 regulation of transcription involved in meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051170 import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0051241 negative regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0051880 G-quadruplex DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0052372 modulation by symbiont of entry into host IEP Predict GO terms from Neighborhoods
BP GO:0055072 iron ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0061982 meiosis I cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0072359 circulatory system development IEP Predict GO terms from Neighborhoods
BP GO:0080147 root hair cell development IEP Predict GO terms from Neighborhoods
BP GO:0090030 regulation of steroid hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP Predict GO terms from Neighborhoods
CC GO:0090734 site of DNA damage IEP Predict GO terms from Neighborhoods
BP GO:0097551 mitochondrial double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:0097552 mitochondrial double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
MF GO:0098847 sequence-specific single stranded DNA binding IEP Predict GO terms from Neighborhoods
CC GO:0099086 synaptonemal structure IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
CC GO:0140445 chromosome, telomeric repeat region IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
BP GO:1902446 regulation of shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:1902448 positive regulation of shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902750 negative regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1903900 regulation of viral life cycle IEP Predict GO terms from Neighborhoods
BP GO:1903901 negative regulation of viral life cycle IEP Predict GO terms from Neighborhoods
BP GO:1905267 endonucleolytic cleavage involved in tRNA processing IEP Predict GO terms from Neighborhoods
BP GO:1990898 meiotic DNA double-strand break clipping IEP Predict GO terms from Neighborhoods
BP GO:1990918 double-strand break repair involved in meiotic recombination IEP Predict GO terms from Neighborhoods
BP GO:2000026 regulation of multicellular organismal development IEP Predict GO terms from Neighborhoods
BP GO:2000030 regulation of response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:2000306 positive regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000488 positive regulation of brassinosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000904 regulation of starch metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000905 negative regulation of starch metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036853 Ribosomal_L14_sf 89 206
IPR005745 Ribosomal_L14P_bac-type 89 206
IPR000218 Ribosomal_L14P 89 206
No external refs found!