SOLTUB.AGRIA.G00000013264


Description : B-box zinc finger family protein


Gene families : OG_02_0014024 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000013264
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_245


Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0007623 circadian rhythm IEA AHRD
BP GO:0009637 response to blue light IEA AHRD
BP GO:0009658 chloroplast organization IEA AHRD
BP GO:0009909 regulation of flower development IEA AHRD
BP GO:0010018 far-red light signaling pathway IEA AHRD
BP GO:0010114 response to red light IEA AHRD
BP GO:0010629 negative regulation of gene expression IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
BP GO:0045892 negative regulation of DNA-templated transcription IEA AHRD
BP GO:0048576 positive regulation of short-day photoperiodism, flowering IEA AHRD
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEA AHRD
BP GO:2000032 regulation of secondary shoot formation IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000120 RNA polymerase I transcription regulator complex IEP Predict GO terms from Neighborhoods
CC GO:0000500 RNA polymerase I upstream activating factor complex IEP Predict GO terms from Neighborhoods
MF GO:0001163 RNA polymerase I transcription regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001165 RNA polymerase I cis-regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0001671 ATPase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0001845 phagolysosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0002237 response to molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0002695 negative regulation of leukocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0002698 negative regulation of immune effector process IEP Predict GO terms from Neighborhoods
BP GO:0002768 immune response-regulating cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0004565 beta-galactosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004674 protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004709 MAP kinase kinase kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0005513 detection of calcium ion IEP Predict GO terms from Neighborhoods
CC GO:0005767 secondary lysosome IEP Predict GO terms from Neighborhoods
CC GO:0005955 calcineurin complex IEP Predict GO terms from Neighborhoods
BP GO:0006109 regulation of carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006352 DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:0006360 transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP Predict GO terms from Neighborhoods
BP GO:0006404 RNA import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006458 'de novo' protein folding IEP Predict GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Predict GO terms from Neighborhoods
BP GO:0006626 protein targeting to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0006839 mitochondrial transport IEP Predict GO terms from Neighborhoods
BP GO:0006971 hypotonic response IEP Predict GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0007040 lysosome organization IEP Predict GO terms from Neighborhoods
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0008157 protein phosphatase 1 binding IEP Predict GO terms from Neighborhoods
BP GO:0008286 insulin receptor signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predict GO terms from Neighborhoods
BP GO:0009268 response to pH IEP Predict GO terms from Neighborhoods
BP GO:0009303 rRNA transcription IEP Predict GO terms from Neighborhoods
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predict GO terms from Neighborhoods
BP GO:0009409 response to cold IEP Predict GO terms from Neighborhoods
BP GO:0009738 abscisic acid-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009755 hormone-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009845 seed germination IEP Predict GO terms from Neighborhoods
BP GO:0010068 protoderm histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010099 regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010100 negative regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010161 red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010223 secondary shoot formation IEP Predict GO terms from Neighborhoods
BP GO:0010262 somatic embryogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predict GO terms from Neighborhoods
BP GO:0010344 seed oilbody biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010346 shoot axis formation IEP Predict GO terms from Neighborhoods
BP GO:0010446 response to alkaline pH IEP Predict GO terms from Neighborhoods
BP GO:0010762 regulation of fibroblast migration IEP Predict GO terms from Neighborhoods
CC GO:0012506 vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0012510 trans-Golgi network transport vesicle membrane IEP Predict GO terms from Neighborhoods
MF GO:0015925 galactosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0016421 CoA carboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predict GO terms from Neighborhoods
BP GO:0019220 regulation of phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019221 cytokine-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0019722 calcium-mediated signaling IEP Predict GO terms from Neighborhoods
MF GO:0019900 kinase binding IEP Predict GO terms from Neighborhoods
MF GO:0019901 protein kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0019932 second-messenger-mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0030007 cellular potassium ion homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0030018 Z disc IEP Predict GO terms from Neighborhoods
MF GO:0030599 pectinesterase activity IEP Predict GO terms from Neighborhoods
CC GO:0030658 transport vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030659 cytoplasmic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030660 Golgi-associated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030662 coated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030665 clathrin-coated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030666 endocytic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030670 phagocytic vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031532 actin cytoskeleton reorganization IEP Predict GO terms from Neighborhoods
BP GO:0031589 cell-substrate adhesion IEP Predict GO terms from Neighborhoods
CC GO:0032010 phagolysosome IEP Predict GO terms from Neighborhoods
CC GO:0032578 aleurone grain membrane IEP Predict GO terms from Neighborhoods
BP GO:0032780 negative regulation of ATP-dependent activity IEP Predict GO terms from Neighborhoods
BP GO:0033003 regulation of mast cell activation IEP Predict GO terms from Neighborhoods
BP GO:0033004 negative regulation of mast cell activation IEP Predict GO terms from Neighborhoods
BP GO:0033006 regulation of mast cell activation involved in immune response IEP Predict GO terms from Neighborhoods
BP GO:0033007 negative regulation of mast cell activation involved in immune response IEP Predict GO terms from Neighborhoods
BP GO:0034446 substrate adhesion-dependent cell spreading IEP Predict GO terms from Neighborhoods
BP GO:0035426 extracellular matrix-cell signaling IEP Predict GO terms from Neighborhoods
BP GO:0035719 tRNA import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0036119 response to platelet-derived growth factor IEP Predict GO terms from Neighborhoods
BP GO:0036289 peptidyl-serine autophosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0038028 insulin receptor signaling pathway via phosphatidylinositol 3-kinase IEP Predict GO terms from Neighborhoods
BP GO:0038093 Fc receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0038095 Fc-epsilon receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0038109 Kit signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0040013 negative regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0042026 protein refolding IEP Predict GO terms from Neighborhoods
BP GO:0042539 hypotonic salinity response IEP Predict GO terms from Neighborhoods
BP GO:0042742 defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0042790 nucleolar large rRNA transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0043462 regulation of ATP-dependent activity IEP Predict GO terms from Neighborhoods
BP GO:0044331 cell-cell adhesion mediated by cadherin IEP Predict GO terms from Neighborhoods
BP GO:0045036 protein targeting to chloroplast IEP Predict GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Predict GO terms from Neighborhoods
MF GO:0045295 gamma-catenin binding IEP Predict GO terms from Neighborhoods
MF GO:0045296 cadherin binding IEP Predict GO terms from Neighborhoods
BP GO:0046461 neutral lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046464 acylglycerol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046503 glycerolipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046777 protein autophosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0046910 pectinesterase inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:0048008 platelet-derived growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0050829 defense response to Gram-negative bacterium IEP Predict GO terms from Neighborhoods
MF GO:0050839 cell adhesion molecule binding IEP Predict GO terms from Neighborhoods
BP GO:0050866 negative regulation of cell activation IEP Predict GO terms from Neighborhoods
BP GO:0050900 leukocyte migration IEP Predict GO terms from Neighborhoods
BP GO:0050904 diapedesis IEP Predict GO terms from Neighborhoods
BP GO:0050920 regulation of chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0050921 positive regulation of chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0050922 negative regulation of chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0050926 regulation of positive chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0050928 negative regulation of positive chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0051031 tRNA transport IEP Predict GO terms from Neighborhoods
BP GO:0051084 'de novo' post-translational protein folding IEP Predict GO terms from Neighborhoods
BP GO:0051085 chaperone cofactor-dependent protein refolding IEP Predict GO terms from Neighborhoods
BP GO:0051174 regulation of phosphorus metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0060711 labyrinthine layer development IEP Predict GO terms from Neighborhoods
BP GO:0061118 regulation of positive chemotaxis to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0061123 negative regulation of positive chemotaxis to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0070585 protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0071071 regulation of phospholipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0071244 cellular response to carbon dioxide IEP Predict GO terms from Neighborhoods
BP GO:0071491 cellular response to red light IEP Predict GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Predict GO terms from Neighborhoods
BP GO:0072596 establishment of protein localization to chloroplast IEP Predict GO terms from Neighborhoods
BP GO:0072598 protein localization to chloroplast IEP Predict GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0072655 establishment of protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0080171 lytic vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0090558 plant epidermis development IEP Predict GO terms from Neighborhoods
BP GO:0098609 cell-cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:0098781 ncRNA transcription IEP Predict GO terms from Neighborhoods
MF GO:0140223 general transcription initiation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Predict GO terms from Neighborhoods
BP GO:1900150 regulation of defense response to fungus IEP Predict GO terms from Neighborhoods
BP GO:1902066 regulation of cell wall pectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902395 regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predict GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Predict GO terms from Neighborhoods
BP GO:1903725 regulation of phospholipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1905393 plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:2000030 regulation of response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:2000035 regulation of stem cell division IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!