SOLTUB.AGRIA.G00000014338


Description : RING/U-box superfamily protein


Gene families : OG_02_0019409 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000014338
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_75


Type GO Term Name Evidence Source
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0000209 protein polyubiquitination IEA AHRD
BP GO:0000578 embryonic axis specification IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005774 vacuolar membrane IEA AHRD
CC GO:0005829 cytosol IEA AHRD
MF GO:0008134 transcription factor binding IEA AHRD
BP GO:0009793 embryo development ending in seed dormancy IEA AHRD
BP GO:0010228 vegetative to reproductive phase transition of meristem IEA AHRD
BP GO:0040008 regulation of growth IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA AHRD
BP GO:0043433 negative regulation of DNA-binding transcription factor activity IEA AHRD
BP GO:0060816 random inactivation of X chromosome IEA AHRD
MF GO:0061630 ubiquitin protein ligase activity IEA AHRD
CC GO:0120025 plasma membrane bounded cell projection IEA AHRD
BP GO:1900095 regulation of dosage compensation by inactivation of X chromosome IEA AHRD
Type GO Term Name Evidence Source
MF GO:0004312 fatty acid synthase activity IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Predict GO terms from Neighborhoods
MF GO:0008422 beta-glucosidase activity IEP Predict GO terms from Neighborhoods
CC GO:0009279 cell outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0009875 pollen-pistil interaction IEP Predict GO terms from Neighborhoods
BP GO:0010103 stomatal complex morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0016297 acyl-[acyl-carrier-protein] hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016790 thiolester hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0042973 glucan endo-1,3-beta-D-glucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly IEP Predict GO terms from Neighborhoods
BP GO:0043171 peptide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Predict GO terms from Neighborhoods
BP GO:0051205 protein insertion into membrane IEP Predict GO terms from Neighborhoods
BP GO:0060320 rejection of self pollen IEP Predict GO terms from Neighborhoods
BP GO:0071709 membrane assembly IEP Predict GO terms from Neighborhoods
BP GO:0090626 plant epidermis morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0097264 self proteolysis IEP Predict GO terms from Neighborhoods
BP GO:1900367 positive regulation of defense response to insect IEP Predict GO terms from Neighborhoods
BP GO:1902066 regulation of cell wall pectin metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001841 Znf_RING 96 138
No external refs found!