Coexpression cluster: Cluster_75 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0060320 rejection of self pollen 10.34% (24/232) 6.59 0.0 0.0
GO:0048544 recognition of pollen 10.34% (24/232) 5.77 0.0 0.0
GO:0005576 extracellular region 28.02% (65/232) 2.59 0.0 0.0
GO:0008037 cell recognition 10.34% (24/232) 5.12 0.0 0.0
GO:0009856 pollination 3.45% (8/232) 4.67 0.0 0.0
GO:0004175 endopeptidase activity 6.9% (16/232) 2.64 0.0 2e-06
GO:0030312 external encapsulating structure 14.66% (34/232) 1.56 0.0 3e-06
GO:0048046 apoplast 9.91% (23/232) 2.0 0.0 4e-06
GO:0031640 killing of cells of another organism 3.02% (7/232) 4.27 0.0 1.1e-05
GO:0031012 extracellular matrix 4.74% (11/232) 3.11 0.0 1.2e-05
GO:0008233 peptidase activity 8.19% (19/232) 2.11 0.0 1.4e-05
GO:0001906 cell killing 3.02% (7/232) 4.03 0.0 2.9e-05
GO:0005615 extracellular space 6.03% (14/232) 2.47 0.0 3.3e-05
GO:0010310 regulation of hydrogen peroxide metabolic process 3.02% (7/232) 3.86 1e-06 5.6e-05
GO:0005618 cell wall 12.5% (29/232) 1.42 2e-06 0.000147
GO:0010150 leaf senescence 6.9% (16/232) 2.05 2e-06 0.000184
GO:0010103 stomatal complex morphogenesis 3.02% (7/232) 3.53 3e-06 0.000219
GO:0046910 pectinesterase inhibitor activity 2.59% (6/232) 3.92 3e-06 0.000231
GO:0090626 plant epidermis morphogenesis 3.02% (7/232) 3.46 4e-06 0.00027
GO:0009609 response to symbiotic bacterium 3.02% (7/232) 3.41 5e-06 0.000328
GO:0009897 external side of plasma membrane 3.02% (7/232) 3.38 5e-06 0.000351
GO:0097264 self proteolysis 2.16% (5/232) 4.26 6e-06 0.000396
GO:0090693 plant organ senescence 6.9% (16/232) 1.89 9e-06 0.000512
GO:0004190 aspartic-type endopeptidase activity 2.16% (5/232) 4.1 1.1e-05 0.000622
GO:0009875 pollen-pistil interaction 1.72% (4/232) 4.44 3.4e-05 0.001844
GO:0010102 lateral root morphogenesis 3.02% (7/232) 2.95 3.9e-05 0.002036
GO:0010101 post-embryonic root morphogenesis 3.02% (7/232) 2.93 4.2e-05 0.00213
GO:0070001 aspartic-type peptidase activity 2.16% (5/232) 3.7 4.4e-05 0.00214
GO:0071944 cell periphery 3.45% (8/232) 2.64 4.9e-05 0.002237
GO:0080001 mucilage extrusion from seed coat 3.02% (7/232) 2.9 4.7e-05 0.00224
GO:0046593 mandelonitrile lyase activity 1.72% (4/232) 4.07 9.3e-05 0.004142
GO:0050038 L-xylulose reductase (NADP+) activity 0.86% (2/232) 6.81 0.000105 0.004364
GO:0004857 enzyme inhibitor activity 4.31% (10/232) 2.15 0.000102 0.004369
GO:0004252 serine-type endopeptidase activity 3.02% (7/232) 2.7 0.000111 0.004487
GO:0010337 regulation of salicylic acid metabolic process 2.16% (5/232) 3.4 0.000118 0.004635
GO:1902066 regulation of cell wall pectin metabolic process 2.16% (5/232) 3.36 0.000133 0.004928
GO:0006624 vacuolar protein processing 1.29% (3/232) 4.89 0.000132 0.005037
GO:0048359 mucilage metabolic process involved in seed coat development 3.02% (7/232) 2.63 0.00015 0.005421
GO:0036377 arbuscular mycorrhizal association 3.02% (7/232) 2.61 0.000165 0.005671
GO:2000038 regulation of stomatal complex development 2.59% (6/232) 2.9 0.000163 0.005733
GO:0005998 xylulose catabolic process 0.86% (2/232) 6.4 0.000209 0.005738
GO:0071634 regulation of transforming growth factor beta production 0.86% (2/232) 6.4 0.000209 0.005738
GO:0071636 positive regulation of transforming growth factor beta production 0.86% (2/232) 6.4 0.000209 0.005738
GO:1904897 regulation of hepatic stellate cell proliferation 0.86% (2/232) 6.4 0.000209 0.005738
GO:1904899 positive regulation of hepatic stellate cell proliferation 0.86% (2/232) 6.4 0.000209 0.005738
GO:2000843 regulation of testosterone secretion 0.86% (2/232) 6.4 0.000209 0.005738
GO:2000845 positive regulation of testosterone secretion 0.86% (2/232) 6.4 0.000209 0.005738
GO:2001026 regulation of endothelial cell chemotaxis 0.86% (2/232) 6.4 0.000209 0.005738
GO:2001028 positive regulation of endothelial cell chemotaxis 0.86% (2/232) 6.4 0.000209 0.005738
GO:0046658 anchored component of plasma membrane 3.45% (8/232) 2.33 0.000216 0.005831
GO:0009610 response to symbiotic fungus 3.45% (8/232) 2.36 0.000186 0.006222
GO:0090282 positive regulation of transcription involved in G2/M transition of mitotic cell cycle 0.86% (2/232) 6.07 0.000347 0.008987
GO:0097202 activation of cysteine-type endopeptidase activity 0.86% (2/232) 6.07 0.000347 0.008987
GO:0090697 post-embryonic plant organ morphogenesis 3.45% (8/232) 2.19 0.000411 0.010461
GO:1990019 protein storage vacuole organization 1.29% (3/232) 4.34 0.000431 0.010768
GO:2000122 negative regulation of stomatal complex development 1.72% (4/232) 3.49 0.000454 0.011149
GO:0009608 response to symbiont 3.45% (8/232) 2.15 0.00049 0.011618
GO:0016832 aldehyde-lyase activity 1.72% (4/232) 3.47 0.000484 0.011668
GO:1900273 positive regulation of long-term synaptic potentiation 0.86% (2/232) 5.81 0.000518 0.011861
GO:0010191 mucilage metabolic process 3.02% (7/232) 2.33 0.000529 0.011906
GO:0008236 serine-type peptidase activity 3.02% (7/232) 2.34 0.000515 0.012001
GO:0017171 serine hydrolase activity 3.02% (7/232) 2.3 0.000599 0.013275
GO:0031225 anchored component of membrane 3.88% (9/232) 1.92 0.000724 0.015538
GO:0090026 positive regulation of monocyte chemotaxis 0.86% (2/232) 5.59 0.000722 0.015753
GO:0009620 response to fungus 11.21% (26/232) 0.97 0.000841 0.017787
GO:1904095 negative regulation of endosperm development 0.86% (2/232) 5.4 0.000959 0.01883
GO:2001279 regulation of unsaturated fatty acid biosynthetic process 0.86% (2/232) 5.4 0.000959 0.01883
GO:2001280 positive regulation of unsaturated fatty acid biosynthetic process 0.86% (2/232) 5.4 0.000959 0.01883
GO:0035728 response to hepatocyte growth factor 0.86% (2/232) 5.4 0.000959 0.01883
GO:0035729 cellular response to hepatocyte growth factor stimulus 0.86% (2/232) 5.4 0.000959 0.01883
GO:0043667 pollen wall 1.29% (3/232) 3.94 0.000987 0.019107
GO:0045792 negative regulation of cell size 0.86% (2/232) 5.23 0.001229 0.023445
GO:0050529 polyneuridine-aldehyde esterase activity 1.29% (3/232) 3.81 0.001275 0.024003
GO:0016787 hydrolase activity 16.81% (39/232) 0.71 0.001387 0.025751
GO:0098552 side of membrane 3.02% (7/232) 2.09 0.001411 0.025842
GO:0032881 regulation of polysaccharide metabolic process 3.02% (7/232) 2.07 0.001531 0.026288
GO:2000489 regulation of hepatic stellate cell activation 0.86% (2/232) 5.07 0.00153 0.026605
GO:2000491 positive regulation of hepatic stellate cell activation 0.86% (2/232) 5.07 0.00153 0.026605
GO:0031638 zymogen activation 0.86% (2/232) 5.07 0.00153 0.026605
GO:0016139 glycoside catabolic process 1.29% (3/232) 3.73 0.001494 0.027003
GO:0048565 digestive tract development 1.29% (3/232) 3.62 0.001863 0.028759
GO:0005997 xylulose metabolic process 0.86% (2/232) 4.94 0.001862 0.029077
GO:0010712 regulation of collagen metabolic process 0.86% (2/232) 4.94 0.001862 0.029077
GO:0010714 positive regulation of collagen metabolic process 0.86% (2/232) 4.94 0.001862 0.029077
GO:0032965 regulation of collagen biosynthetic process 0.86% (2/232) 4.94 0.001862 0.029077
GO:0032967 positive regulation of collagen biosynthetic process 0.86% (2/232) 4.94 0.001862 0.029077
GO:2000692 negative regulation of seed maturation 0.86% (2/232) 4.94 0.001862 0.029077
GO:0090025 regulation of monocyte chemotaxis 0.86% (2/232) 4.94 0.001862 0.029077
GO:0010447 response to acidic pH 1.29% (3/232) 3.66 0.001734 0.029416
GO:0004090 carbonyl reductase (NADPH) activity 0.86% (2/232) 4.81 0.002226 0.032888
GO:0019323 pentose catabolic process 0.86% (2/232) 4.81 0.002226 0.032888
GO:0000117 regulation of transcription involved in G2/M transition of mitotic cell cycle 0.86% (2/232) 4.81 0.002226 0.032888
GO:0060252 positive regulation of glial cell proliferation 0.86% (2/232) 4.81 0.002226 0.032888
GO:0080031 methyl salicylate esterase activity 1.29% (3/232) 3.46 0.002596 0.03715
GO:0080032 methyl jasmonate esterase activity 1.29% (3/232) 3.46 0.002596 0.03715
GO:0050921 positive regulation of chemotaxis 1.29% (3/232) 3.46 0.002596 0.03715
GO:2000377 regulation of reactive oxygen species metabolic process 3.02% (7/232) 1.93 0.002656 0.03762
GO:0006949 syncytium formation 1.29% (3/232) 3.4 0.002932 0.041105
GO:0043171 peptide catabolic process 1.29% (3/232) 3.37 0.003109 0.043156
GO:0009827 plant-type cell wall modification 3.02% (7/232) 1.88 0.003218 0.044221
GO:0080030 methyl indole-3-acetate esterase activity 1.29% (3/232) 3.34 0.003294 0.044806
GO:0007307 eggshell chorion gene amplification 0.86% (2/232) 4.49 0.0035 0.046691
GO:0000326 protein storage vacuole 1.29% (3/232) 3.31 0.003484 0.046935
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_105 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_107 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_111 0.023 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_113 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_139 0.039 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_149 0.019 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_167 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_9 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_13 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_15 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_20 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_21 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_43 0.008 Orthogroups with 8 Potato genotypes Compare
Sequences (232) (download table)

InterPro Domains

GO Terms

Family Terms