SOLTUB.AGRIA.G00000014381

Description : Mediator of rna polymerase ii transcription subunit 13

Gene families : OG_02_0008869 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000014381
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_250

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000043044	No alias	Mediator of rna polymerase ii transcription subunit 13	0.06	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000043044	No alias	Mediator of rna polymerase ii transcription subunit 13	0.06	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000043044	No alias	Mediator of rna polymerase ii transcription subunit 13	0.06	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
BP	GO:0001654	eye development	None	Extended
BP	GO:0001667	ameboidal-type cell migration	None	Extended
BP	GO:0001755	neural crest cell migration	IEA	AHRD
BP	GO:0003002	regionalization	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003712	transcription coregulator activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription regulator complex	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEA	AHRD
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0007423	sensory organ development	None	Extended
BP	GO:0007447	imaginal disc pattern formation	None	Extended
BP	GO:0007450	dorsal/ventral pattern formation, imaginal disc	None	Extended
BP	GO:0007525	somatic muscle development	None	Extended
BP	GO:0007526	larval somatic muscle development	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009953	dorsal/ventral pattern formation	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009967	positive regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010647	positive regulation of cell communication	None	Extended
BP	GO:0016477	cell migration	None	Extended
CC	GO:0016592	mediator complex	IEA	AHRD
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022416	chaeta development	IEA	AHRD
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023056	positive regulation of signaling	None	Extended
BP	GO:0030111	regulation of Wnt signaling pathway	None	Extended
BP	GO:0030177	positive regulation of Wnt signaling pathway	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0035222	wing disc pattern formation	None	Extended
BP	GO:0035282	segmentation	None	Extended
BP	GO:0035285	appendage segmentation	None	Extended
BP	GO:0036011	imaginal disc-derived leg segmentation	IEA	AHRD
BP	GO:0040034	regulation of development, heterochronic	IEA	AHRD
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0042632	cholesterol homeostasis	IEA	AHRD
BP	GO:0043433	negative regulation of DNA-binding transcription factor activity	IEA	AHRD
BP	GO:0044092	negative regulation of molecular function	None	Extended
BP	GO:0045165	cell fate commitment	IEA	AHRD
BP	GO:0045498	sex comb development	IEA	AHRD
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048190	wing disc dorsal/ventral pattern formation	IEA	AHRD
BP	GO:0048513	animal organ development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048569	post-embryonic animal organ development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048749	compound eye development	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0048870	cell motility	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051090	regulation of DNA-binding transcription factor activity	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0055088	lipid homeostasis	None	Extended
BP	GO:0055090	acylglycerol homeostasis	None	Extended
BP	GO:0055092	sterol homeostasis	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060828	regulation of canonical Wnt signaling pathway	None	Extended
BP	GO:0061061	muscle structure development	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0070328	triglyceride homeostasis	IEA	AHRD
CC	GO:0070847	core mediator complex	IEA	AHRD
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090213	regulation of radial pattern formation	IEA	AHRD
BP	GO:0090263	positive regulation of canonical Wnt signaling pathway	IEA	AHRD
BP	GO:0090497	mesenchymal cell migration	None	Extended
CC	GO:0090575	RNA polymerase II transcription regulator complex	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000149	SNARE binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006624	vacuolar protein processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
BP	GO:0006914	autophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0016485	protein processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0048193	Golgi vesicle transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051604	protein maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Predict GO terms from Neighborhoods
CC	GO:0070939	Dsl1/NZR complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0099023	vesicle tethering complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR009401	Med13_C	1570	1964
IPR021643	Mediator_Med13_N	2	299
IPR041285	MID_MedPIWI	1166	1281
IPR041285	MID_MedPIWI	1284	1401

External Links

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SOLTUB.AGRIA.G00000014381

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation