1. Home
  2. Species
  3. Solanum tuberosum Agria
  4. Sequence
  5. SOLTUB.AGRIA.G00000015919

SOLTUB.AGRIA.G00000015919


Description : Trafficking protein particle complex subunit-like protein


Gene families : OG_02_0014302 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000015919
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_217


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
CC GO:0005794 Golgi apparatus IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0016236 macroautophagy IEA AHRD
CC GO:0030008 TRAPP complex IEA AHRD
BP GO:0046907 intracellular transport IEA AHRD
BP GO:0048193 Golgi vesicle transport IEA AHRD
BP GO:1903232 melanosome assembly IEA AHRD
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain IEP Predict GO terms from Neighborhoods
BP GO:0000266 mitochondrial fission IEP Predict GO terms from Neighborhoods
BP GO:0000303 response to superoxide IEP Predict GO terms from Neighborhoods
BP GO:0000305 response to oxygen radical IEP Predict GO terms from Neighborhoods
BP GO:0000338 protein deneddylation IEP Predict GO terms from Neighborhoods
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predict GO terms from Neighborhoods
CC GO:0000418 RNA polymerase IV complex IEP Predict GO terms from Neighborhoods
CC GO:0000419 RNA polymerase V complex IEP Predict GO terms from Neighborhoods
CC GO:0000502 proteasome complex IEP Predict GO terms from Neighborhoods
BP GO:0000724 double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0000725 recombinational repair IEP Predict GO terms from Neighborhoods
MF GO:0001054 RNA polymerase I activity IEP Predict GO terms from Neighborhoods
MF GO:0001055 RNA polymerase II activity IEP Predict GO terms from Neighborhoods
MF GO:0001056 RNA polymerase III activity IEP Predict GO terms from Neighborhoods
BP GO:0001751 compound eye photoreceptor cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0001754 eye photoreceptor cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0001825 blastocyst formation IEP Predict GO terms from Neighborhoods
BP GO:0002443 leukocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002444 myeloid leukocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002446 neutrophil mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002573 myeloid leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0003400 regulation of COPII vesicle coating IEP Predict GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0003756 protein disulfide isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004089 carbonate dehydratase activity IEP Predict GO terms from Neighborhoods
MF GO:0004362 glutathione-disulfide reductase (NADPH) activity IEP Predict GO terms from Neighborhoods
MF GO:0004520 endodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004791 thioredoxin-disulfide reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0005527 macrolide binding IEP Predict GO terms from Neighborhoods
MF GO:0005528 FK506 binding IEP Predict GO terms from Neighborhoods
CC GO:0005665 RNA polymerase II, core complex IEP Predict GO terms from Neighborhoods
CC GO:0005666 RNA polymerase III complex IEP Predict GO terms from Neighborhoods
CC GO:0005736 RNA polymerase I complex IEP Predict GO terms from Neighborhoods
CC GO:0005747 mitochondrial respiratory chain complex I IEP Predict GO terms from Neighborhoods
CC GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) IEP Predict GO terms from Neighborhoods
CC GO:0005774 vacuolar membrane IEP Predict GO terms from Neighborhoods
CC GO:0005787 signal peptidase complex IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predict GO terms from Neighborhoods
BP GO:0006302 double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predict GO terms from Neighborhoods
BP GO:0006310 DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0006360 transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0006366 transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0006383 transcription by RNA polymerase III IEP Predict GO terms from Neighborhoods
BP GO:0006465 signal peptide processing IEP Predict GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006811 ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006812 cation transport IEP Predict GO terms from Neighborhoods
BP GO:0006998 nuclear envelope organization IEP Predict GO terms from Neighborhoods
BP GO:0007005 mitochondrion organization IEP Predict GO terms from Neighborhoods
BP GO:0007029 endoplasmic reticulum organization IEP Predict GO terms from Neighborhoods
BP GO:0007035 vacuolar acidification IEP Predict GO terms from Neighborhoods
BP GO:0007282 cystoblast division IEP Predict GO terms from Neighborhoods
BP GO:0007309 oocyte axis specification IEP Predict GO terms from Neighborhoods
BP GO:0007310 oocyte dorsal/ventral axis specification IEP Predict GO terms from Neighborhoods
BP GO:0007314 oocyte anterior/posterior axis specification IEP Predict GO terms from Neighborhoods
CC GO:0008180 COP9 signalosome IEP Predict GO terms from Neighborhoods
MF GO:0008324 cation transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0008347 glial cell migration IEP Predict GO terms from Neighborhoods
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predict GO terms from Neighborhoods
MF GO:0008553 P-type proton-exporting transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0008794 arsenate reductase (glutaredoxin) activity IEP Predict GO terms from Neighborhoods
MF GO:0008821 crossover junction endodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0009304 tRNA transcription IEP Predict GO terms from Neighborhoods
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009853 photorespiration IEP Predict GO terms from Neighborhoods
BP GO:0009948 anterior/posterior axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009950 dorsal/ventral axis specification IEP Predict GO terms from Neighborhoods
BP GO:0010100 negative regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010387 COP9 signalosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0010971 positive regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
MF GO:0015038 glutathione disulfide oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0015075 ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015078 proton transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015662 P-type ion transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predict GO terms from Neighborhoods
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predict GO terms from Neighborhoods
BP GO:0016477 cell migration IEP Predict GO terms from Neighborhoods
MF GO:0016504 peptidase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0016559 peroxisome fission IEP Predict GO terms from Neighborhoods
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Predict GO terms from Neighborhoods
MF GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predict GO terms from Neighborhoods
BP GO:0019221 cytokine-mediated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0019784 deNEDDylase activity IEP Predict GO terms from Neighborhoods
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Predict GO terms from Neighborhoods
BP GO:0030223 neutrophil differentiation IEP Predict GO terms from Neighborhoods
MF GO:0030611 arsenate reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0030613 oxidoreductase activity, acting on phosphorus or arsenic in donors IEP Predict GO terms from Neighborhoods
MF GO:0030614 oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0030656 regulation of vitamin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030718 germ-line stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0030851 granulocyte differentiation IEP Predict GO terms from Neighborhoods
CC GO:0030875 rDNA protrusion IEP Predict GO terms from Neighborhoods
CC GO:0030964 NADH dehydrogenase complex IEP Predict GO terms from Neighborhoods
BP GO:0031154 culmination involved in sorocarp development IEP Predict GO terms from Neighborhoods
CC GO:0031597 cytosolic proteasome complex IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
BP GO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predict GO terms from Neighborhoods
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predict GO terms from Neighborhoods
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predict GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Predict GO terms from Neighborhoods
CC GO:0033557 Slx1-Slx4 complex IEP Predict GO terms from Neighborhoods
BP GO:0034220 ion transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:0034399 nuclear periphery IEP Predict GO terms from Neighborhoods
CC GO:0034515 proteasome storage granule IEP Predict GO terms from Neighborhoods
BP GO:0035203 regulation of lamellocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0035204 negative regulation of lamellocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0035206 regulation of hemocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:0035207 negative regulation of hemocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:0036099 female germ-line stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0038158 granulocyte colony-stimulating factor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0042797 tRNA transcription by RNA polymerase III IEP Predict GO terms from Neighborhoods
BP GO:0043007 maintenance of rDNA IEP Predict GO terms from Neighborhoods
BP GO:0043094 cellular metabolic compound salvage IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Predict GO terms from Neighborhoods
MF GO:0043495 protein-membrane adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0043570 maintenance of DNA repeat elements IEP Predict GO terms from Neighborhoods
BP GO:0043603 cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Predict GO terms from Neighborhoods
CC GO:0044232 organelle membrane contact site IEP Predict GO terms from Neighborhoods
CC GO:0044233 mitochondria-associated endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predict GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Predict GO terms from Neighborhoods
CC GO:0045257 succinate dehydrogenase complex (ubiquinone) IEP Predict GO terms from Neighborhoods
CC GO:0045271 respiratory chain complex I IEP Predict GO terms from Neighborhoods
CC GO:0045281 succinate dehydrogenase complex IEP Predict GO terms from Neighborhoods
CC GO:0045283 fumarate reductase complex IEP Predict GO terms from Neighborhoods
BP GO:0045610 regulation of hemocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045611 negative regulation of hemocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045613 regulation of plasmatocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045614 negative regulation of plasmatocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0046530 photoreceptor cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predict GO terms from Neighborhoods
MF GO:0047134 protein-disulfide reductase (NAD(P)) activity IEP Predict GO terms from Neighborhoods
BP GO:0048138 germ-line cyst encapsulation IEP Predict GO terms from Neighborhoods
BP GO:0048140 male germ-line cyst encapsulation IEP Predict GO terms from Neighborhoods
BP GO:0048142 germarium-derived cystoblast division IEP Predict GO terms from Neighborhoods
BP GO:0048285 organelle fission IEP Predict GO terms from Neighborhoods
BP GO:0048870 cell motility IEP Predict GO terms from Neighborhoods
BP GO:0050900 leukocyte migration IEP Predict GO terms from Neighborhoods
BP GO:0051452 intracellular pH reduction IEP Predict GO terms from Neighborhoods
BP GO:0051775 response to redox state IEP Predict GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0060628 regulation of ER to Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
MF GO:0061133 endopeptidase activator activity IEP Predict GO terms from Neighborhoods
MF GO:0061578 Lys63-specific deubiquitinase activity IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
MF GO:0070122 obsolete isopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0070206 protein trimerization IEP Predict GO terms from Neighborhoods
BP GO:0070207 protein homotrimerization IEP Predict GO terms from Neighborhoods
BP GO:0070536 protein K63-linked deubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0070628 proteasome binding IEP Predict GO terms from Neighborhoods
BP GO:0070861 regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0070863 positive regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0070971 endoplasmic reticulum exit site IEP Predict GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0071450 cellular response to oxygen radical IEP Predict GO terms from Neighborhoods
BP GO:0071451 cellular response to superoxide IEP Predict GO terms from Neighborhoods
CC GO:0071781 endoplasmic reticulum cisternal network IEP Predict GO terms from Neighborhoods
CC GO:0072546 EMC complex IEP Predict GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0085035 haustorium IEP Predict GO terms from Neighborhoods
BP GO:0090113 regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0097307 response to farnesol IEP Predict GO terms from Neighborhoods
BP GO:0097308 cellular response to farnesol IEP Predict GO terms from Neighborhoods
BP GO:0097529 myeloid leukocyte migration IEP Predict GO terms from Neighborhoods
BP GO:0097530 granulocyte migration IEP Predict GO terms from Neighborhoods
MF GO:0097573 glutathione oxidoreductase activity IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
BP GO:0098655 cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098660 inorganic ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098662 inorganic cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098781 ncRNA transcription IEP Predict GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098798 mitochondrial protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098803 respiratory chain complex IEP Predict GO terms from Neighborhoods
MF GO:0106332 ds/ssDNA junction-specific dsDNA endonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0140358 P-type transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1900101 regulation of endoplasmic reticulum unfolded protein response IEP Predict GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Predict GO terms from Neighborhoods
CC GO:1902495 transmembrane transporter complex IEP Predict GO terms from Neighborhoods
BP GO:1902600 proton transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1902751 positive regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902906 proteasome storage granule assembly IEP Predict GO terms from Neighborhoods
BP GO:1903894 regulation of IRE1-mediated unfolded protein response IEP Predict GO terms from Neighborhoods
CC GO:1904813 ficolin-1-rich granule lumen IEP Predict GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Predict GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Predict GO terms from Neighborhoods
BP GO:1990182 exosomal secretion IEP Predict GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Predict GO terms from Neighborhoods
MF GO:1990238 double-stranded DNA endodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:1990266 neutrophil migration IEP Predict GO terms from Neighborhoods
CC GO:1990351 transporter complex IEP Predict GO terms from Neighborhoods
BP GO:2000082 regulation of L-ascorbic acid biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR024096 NO_sig/Golgi_transp_ligand-bd 3 174
IPR007194 TRAPP_component 11 174
No external refs found!