SOLTUB.AGRIA.G00000016536


Description : MYB family protein


Gene families : OG_02_0014470 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000016536
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_62


Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEA AHRD
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0000281 mitotic cytokinesis IEA AHRD
CC GO:0000791 euchromatin IEA AHRD
MF GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA AHRD
MF GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IEA AHRD
BP GO:0001701 in utero embryonic development IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005700 polytene chromosome IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006338 chromatin remodeling IEA AHRD
BP GO:0006816 calcium ion transport IEA AHRD
BP GO:0007030 Golgi organization IEA AHRD
BP GO:0007051 spindle organization IEA AHRD
BP GO:0007088 regulation of mitotic nuclear division IEA AHRD
BP GO:0007099 centriole replication IEA AHRD
BP GO:0007141 male meiosis I IEA AHRD
BP GO:0007283 spermatogenesis IEA AHRD
BP GO:0007307 eggshell chorion gene amplification IEA AHRD
BP GO:0008284 positive regulation of cell population proliferation IEA AHRD
BP GO:0009414 response to water deprivation IEA AHRD
BP GO:0009555 pollen development IEA AHRD
BP GO:0009738 abscisic acid-activated signaling pathway IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
BP GO:0010529 negative regulation of transposition IEA AHRD
BP GO:0010929 positive regulation of auxin mediated signaling pathway IEA AHRD
BP GO:0010971 positive regulation of G2/M transition of mitotic cell cycle IEA AHRD
CC GO:0016363 nuclear matrix IEA AHRD
BP GO:0017145 stem cell division IEA AHRD
BP GO:0019760 glucosinolate metabolic process IEA AHRD
BP GO:0030099 myeloid cell differentiation IEA AHRD
BP GO:0030183 B cell differentiation IEA AHRD
BP GO:0030261 chromosome condensation IEA AHRD
CC GO:0031523 Myb complex IEA AHRD
BP GO:0042742 defense response to bacterium IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
BP GO:0045624 positive regulation of T-helper cell differentiation IEA AHRD
BP GO:0045792 negative regulation of cell size IEA AHRD
BP GO:0048527 lateral root development IEA AHRD
BP GO:0048536 spleen development IEA AHRD
BP GO:0048538 thymus development IEA AHRD
BP GO:0048566 embryonic digestive tract development IEA AHRD
BP GO:0048872 homeostasis of number of cells IEA AHRD
BP GO:0051571 positive regulation of histone H3-K4 methylation IEA AHRD
BP GO:0051574 positive regulation of histone H3-K9 methylation IEA AHRD
BP GO:0071354 cellular response to interleukin-6 IEA AHRD
MF GO:0071987 WD40-repeat domain binding IEA AHRD
BP GO:0090282 positive regulation of transcription involved in G2/M transition of mitotic cell cycle IEA AHRD
BP GO:1900150 regulation of defense response to fungus IEA AHRD
BP GO:1901001 negative regulation of response to salt stress IEA AHRD
BP GO:1901216 positive regulation of neuron death IEA AHRD
BP GO:1901347 negative regulation of secondary cell wall biogenesis IEA AHRD
BP GO:1901348 positive regulation of secondary cell wall biogenesis IEA AHRD
BP GO:1901533 negative regulation of hematopoietic progenitor cell differentiation IEA AHRD
BP GO:1902074 response to salt IEA AHRD
BP GO:1990511 piRNA biosynthetic process IEA AHRD
BP GO:1990830 cellular response to leukemia inhibitory factor IEA AHRD
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEA AHRD
BP GO:2000031 regulation of salicylic acid mediated signaling pathway IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predict GO terms from Neighborhoods
BP GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic IEP Predict GO terms from Neighborhoods
CC GO:0000813 ESCRT I complex IEP Predict GO terms from Neighborhoods
BP GO:0001959 regulation of cytokine-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0001960 negative regulation of cytokine-mediated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004532 exoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004535 poly(A)-specific ribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004664 prephenate dehydratase activity IEP Predict GO terms from Neighborhoods
BP GO:0006012 galactose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006063 uronic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006558 L-phenylalanine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006570 tyrosine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006571 tyrosine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0007292 female gamete generation IEP Predict GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predict GO terms from Neighborhoods
BP GO:0009645 response to low light intensity stimulus IEP Predict GO terms from Neighborhoods
BP GO:0010244 response to low fluence blue light stimulus by blue low-fluence system IEP Predict GO terms from Neighborhoods
BP GO:0016441 post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016854 racemase and epimerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predict GO terms from Neighborhoods
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
BP GO:0019320 hexose catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019388 galactose catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019586 galacturonate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0030015 CCR4-NOT core complex IEP Predict GO terms from Neighborhoods
CC GO:0031982 vesicle IEP Predict GO terms from Neighborhoods
CC GO:0032580 Golgi cisterna membrane IEP Predict GO terms from Neighborhoods
BP GO:0032784 regulation of DNA-templated transcription elongation IEP Predict GO terms from Neighborhoods
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Predict GO terms from Neighborhoods
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0033481 galacturonate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033962 P-body assembly IEP Predict GO terms from Neighborhoods
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0035194 post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0035195 miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
CC GO:0036452 ESCRT complex IEP Predict GO terms from Neighborhoods
BP GO:0042509 regulation of tyrosine phosphorylation of STAT protein IEP Predict GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Predict GO terms from Neighborhoods
CC GO:0043186 P granule IEP Predict GO terms from Neighborhoods
BP GO:0043928 exonucleolytic catabolism of deadenylated mRNA IEP Predict GO terms from Neighborhoods
BP GO:0045069 regulation of viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0045070 positive regulation of viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0045824 negative regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0046365 monosaccharide catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0047769 arogenate dehydratase activity IEP Predict GO terms from Neighborhoods
BP GO:0048477 oogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048524 positive regulation of viral process IEP Predict GO terms from Neighborhoods
MF GO:0050378 UDP-glucuronate 4-epimerase activity IEP Predict GO terms from Neighborhoods
BP GO:0050730 regulation of peptidyl-tyrosine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0050792 regulation of viral process IEP Predict GO terms from Neighborhoods
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060338 regulation of type I interferon-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0060339 negative regulation of type I interferon-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0060759 regulation of response to cytokine stimulus IEP Predict GO terms from Neighborhoods
BP GO:0060761 negative regulation of response to cytokine stimulus IEP Predict GO terms from Neighborhoods
BP GO:0061014 positive regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080167 response to karrikin IEP Predict GO terms from Neighborhoods
BP GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0110154 RNA decapping IEP Predict GO terms from Neighborhoods
BP GO:0110156 methylguanosine-cap decapping IEP Predict GO terms from Neighborhoods
BP GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1900153 positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903900 regulation of viral life cycle IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009057 Homeobox-like_sf 33 128
No external refs found!