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  5. SOLTUB.AGRIA.G00000016612

SOLTUB.AGRIA.G00000016612


Description : APO protein 4


Gene families : OG_02_0014499 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000016612
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_260


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
CC GO:0043231 intracellular membrane-bounded organelle IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0000026 alpha-1,2-mannosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0000030 mannosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0001541 ovarian follicle development IEP Predict GO terms from Neighborhoods
BP GO:0002097 tRNA wobble base modification IEP Predict GO terms from Neighborhoods
BP GO:0002098 tRNA wobble uridine modification IEP Predict GO terms from Neighborhoods
BP GO:0002143 tRNA wobble position uridine thiolation IEP Predict GO terms from Neighborhoods
BP GO:0002429 immune response-activating cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002768 immune response-regulating cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEP Predict GO terms from Neighborhoods
MF GO:0004376 glycolipid mannosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004377 GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004448 isocitrate dehydrogenase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
MF GO:0004450 isocitrate dehydrogenase (NADP+) activity IEP Predict GO terms from Neighborhoods
MF GO:0004805 trehalose-phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005463 UDP-N-acetylgalactosamine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005743 mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0005782 peroxisomal matrix IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0005829 cytosol IEP Predict GO terms from Neighborhoods
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP Predict GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005984 disaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005991 trehalose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005992 trehalose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006081 cellular aldehyde metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006097 glyoxylate cycle IEP Predict GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Predict GO terms from Neighborhoods
BP GO:0006102 isocitrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006103 2-oxoglutarate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0006446 regulation of translational initiation IEP Predict GO terms from Neighborhoods
BP GO:0006486 protein glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006575 cellular modified amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006739 NADP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006741 NADP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006749 glutathione metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007272 ensheathment of neurons IEP Predict GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0008366 axon ensheathment IEP Predict GO terms from Neighborhoods
BP GO:0008406 gonad development IEP Predict GO terms from Neighborhoods
BP GO:0008585 female gonad development IEP Predict GO terms from Neighborhoods
BP GO:0008643 carbohydrate transport IEP Predict GO terms from Neighborhoods
BP GO:0009311 oligosaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009534 chloroplast thylakoid IEP Predict GO terms from Neighborhoods
BP GO:0009749 response to glucose IEP Predict GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010043 response to zinc ion IEP Predict GO terms from Neighborhoods
BP GO:0010208 pollen wall assembly IEP Predict GO terms from Neighborhoods
BP GO:0010584 pollen exine formation IEP Predict GO terms from Neighborhoods
BP GO:0010720 positive regulation of cell development IEP Predict GO terms from Neighborhoods
BP GO:0010721 negative regulation of cell development IEP Predict GO terms from Neighborhoods
BP GO:0010975 regulation of neuron projection development IEP Predict GO terms from Neighborhoods
BP GO:0014003 oligodendrocyte development IEP Predict GO terms from Neighborhoods
BP GO:0014013 regulation of gliogenesis IEP Predict GO terms from Neighborhoods
BP GO:0014014 negative regulation of gliogenesis IEP Predict GO terms from Neighborhoods
MF GO:0015136 sialic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015739 sialic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015789 UDP-N-acetylgalactosamine transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Predict GO terms from Neighborhoods
MF GO:0016783 sulfurtransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019203 carbohydrate phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019362 pyridine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0021766 hippocampus development IEP Predict GO terms from Neighborhoods
BP GO:0021782 glial cell development IEP Predict GO terms from Neighborhoods
CC GO:0030173 integral component of Golgi membrane IEP Predict GO terms from Neighborhoods
BP GO:0030307 positive regulation of cell growth IEP Predict GO terms from Neighborhoods
BP GO:0030336 negative regulation of cell migration IEP Predict GO terms from Neighborhoods
CC GO:0030424 axon IEP Predict GO terms from Neighborhoods
BP GO:0030516 regulation of axon extension IEP Predict GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Predict GO terms from Neighborhoods
CC GO:0031228 intrinsic component of Golgi membrane IEP Predict GO terms from Neighborhoods
BP GO:0031329 regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031330 negative regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031346 positive regulation of cell projection organization IEP Predict GO terms from Neighborhoods
CC GO:0031907 microbody lumen IEP Predict GO terms from Neighborhoods
CC GO:0031976 plastid thylakoid IEP Predict GO terms from Neighborhoods
BP GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034227 tRNA thio-modification IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0040013 negative regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0042177 negative regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042552 myelination IEP Predict GO terms from Neighborhoods
BP GO:0043413 macromolecule glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0043434 response to peptide hormone IEP Predict GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044262 cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045595 regulation of cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045773 positive regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0045861 negative regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0046351 disaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046487 glyoxylate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048545 response to steroid hormone IEP Predict GO terms from Neighborhoods
BP GO:0048639 positive regulation of developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0050661 NADP binding IEP Predict GO terms from Neighborhoods
BP GO:0050708 regulation of protein secretion IEP Predict GO terms from Neighborhoods
BP GO:0050709 negative regulation of protein secretion IEP Predict GO terms from Neighborhoods
BP GO:0050767 regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050768 negative regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050769 positive regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050770 regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050772 positive regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050793 regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0050851 antigen receptor-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0050852 T cell receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0050994 regulation of lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051048 negative regulation of secretion IEP Predict GO terms from Neighborhoods
BP GO:0051224 negative regulation of protein transport IEP Predict GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Predict GO terms from Neighborhoods
BP GO:0051341 regulation of oxidoreductase activity IEP Predict GO terms from Neighborhoods
BP GO:0051354 negative regulation of oxidoreductase activity IEP Predict GO terms from Neighborhoods
BP GO:0051960 regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0051961 negative regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0051962 positive regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0060251 regulation of glial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0060253 negative regulation of glial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0060284 regulation of cell development IEP Predict GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0060696 regulation of phospholipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061387 regulation of extent of cell growth IEP Predict GO terms from Neighborhoods
BP GO:0070085 glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0071071 regulation of phospholipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0072350 tricarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072524 pyridine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0097502 mannosylation IEP Predict GO terms from Neighborhoods
BP GO:1901264 carbohydrate derivative transport IEP Predict GO terms from Neighborhoods
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901799 negative regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902183 regulation of shoot apical meristem development IEP Predict GO terms from Neighborhoods
BP GO:1902652 secondary alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903051 negative regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903069 regulation of ER-associated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903070 negative regulation of ER-associated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903530 regulation of secretion by cell IEP Predict GO terms from Neighborhoods
BP GO:1903531 negative regulation of secretion by cell IEP Predict GO terms from Neighborhoods
BP GO:1903573 negative regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:1903725 regulation of phospholipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903828 negative regulation of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1903856 regulation of cytokinin dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:1903857 negative regulation of cytokinin dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:1903975 regulation of glial cell migration IEP Predict GO terms from Neighborhoods
BP GO:1903976 negative regulation of glial cell migration IEP Predict GO terms from Neighborhoods
BP GO:1904292 regulation of ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:1904293 negative regulation of ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:1904464 regulation of matrix metallopeptidase secretion IEP Predict GO terms from Neighborhoods
BP GO:1904465 negative regulation of matrix metallopeptidase secretion IEP Predict GO terms from Neighborhoods
CC GO:1904724 tertiary granule lumen IEP Predict GO terms from Neighborhoods
CC GO:1904813 ficolin-1-rich granule lumen IEP Predict GO terms from Neighborhoods
BP GO:1904950 negative regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1905897 regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:1990569 UDP-N-acetylglucosamine transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000146 negative regulation of cell motility IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR023342 APO_dom 48 184
IPR023342 APO_dom 212 325
No external refs found!