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  5. SOLTUB.AGRIA.G00000016962

SOLTUB.AGRIA.G00000016962


Description : Sporulation RMD1


Gene families : OG_02_0014621 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000016962
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_264


Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEA AHRD
BP GO:0009738 abscisic acid-activated signaling pathway IEA AHRD
BP GO:0010082 regulation of root meristem growth IEA AHRD
BP GO:0010822 positive regulation of mitochondrion organization IEA AHRD
CC GO:0016020 membrane IEA AHRD
BP GO:0030308 negative regulation of cell growth IEA AHRD
BP GO:0031930 mitochondria-nucleus signaling pathway IEA AHRD
BP GO:0032875 regulation of DNA endoreduplication IEA AHRD
BP GO:0051781 positive regulation of cell division IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0000010 trans-hexaprenyltranstransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0000120 RNA polymerase I transcription regulator complex IEP Predict GO terms from Neighborhoods
CC GO:0000126 transcription factor TFIIIB complex IEP Predict GO terms from Neighborhoods
BP GO:0000245 spliceosomal complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0000502 proteasome complex IEP Predict GO terms from Neighborhoods
BP GO:0000578 embryonic axis specification IEP Predict GO terms from Neighborhoods
CC GO:0000791 euchromatin IEP Predict GO terms from Neighborhoods
MF GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0000992 RNA polymerase III cis-regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0000995 RNA polymerase III general transcription initiation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001016 RNA polymerase III transcription regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001046 core promoter sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001091 RNA polymerase II general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
MF GO:0001093 TFIIB-class transcription factor binding IEP Predict GO terms from Neighborhoods
MF GO:0001098 basal transcription machinery binding IEP Predict GO terms from Neighborhoods
MF GO:0001099 basal RNA polymerase II transcription machinery binding IEP Predict GO terms from Neighborhoods
BP GO:0001662 behavioral fear response IEP Predict GO terms from Neighborhoods
MF GO:0001671 ATPase activator activity IEP Predict GO terms from Neighborhoods
CC GO:0001939 female pronucleus IEP Predict GO terms from Neighborhoods
CC GO:0001940 male pronucleus IEP Predict GO terms from Neighborhoods
BP GO:0002090 regulation of receptor internalization IEP Predict GO terms from Neighborhoods
BP GO:0002209 behavioral defense response IEP Predict GO terms from Neighborhoods
MF GO:0003674 molecular_function IEP Predict GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004311 farnesyltranstransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004337 geranyltranstransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Predict GO terms from Neighborhoods
MF GO:0004659 prenyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005102 signaling receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0005488 binding IEP Predict GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Predict GO terms from Neighborhoods
CC GO:0005669 transcription factor TFIID complex IEP Predict GO terms from Neighborhoods
CC GO:0005672 transcription factor TFIIA complex IEP Predict GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Predict GO terms from Neighborhoods
BP GO:0006352 DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006384 transcription initiation at RNA polymerase III promoter IEP Predict GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Predict GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0006743 ubiquinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006744 ubiquinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006986 response to unfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0007369 gastrulation IEP Predict GO terms from Neighborhoods
BP GO:0007631 feeding behavior IEP Predict GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008285 negative regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0008343 adult feeding behavior IEP Predict GO terms from Neighborhoods
BP GO:0008595 anterior/posterior axis specification, embryo IEP Predict GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009435 NAD biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Predict GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009948 anterior/posterior axis specification IEP Predict GO terms from Neighborhoods
BP GO:0010088 phloem development IEP Predict GO terms from Neighborhoods
BP GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway IEP Predict GO terms from Neighborhoods
BP GO:0010236 plastoquinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010469 regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010660 regulation of muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010661 positive regulation of muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010951 negative regulation of endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
CC GO:0016234 inclusion body IEP Predict GO terms from Neighborhoods
MF GO:0016251 RNA polymerase II general transcription initiation factor activity IEP Predict GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0017025 TBP-class protein binding IEP Predict GO terms from Neighborhoods
MF GO:0017162 aryl hydrocarbon receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0030018 Z disc IEP Predict GO terms from Neighborhoods
BP GO:0030162 regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030198 extracellular matrix organization IEP Predict GO terms from Neighborhoods
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:0030534 adult behavior IEP Predict GO terms from Neighborhoods
MF GO:0030544 Hsp70 protein binding IEP Predict GO terms from Neighborhoods
MF GO:0031072 heat shock protein binding IEP Predict GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
CC GO:0031312 extrinsic component of organelle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031329 regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031398 positive regulation of protein ubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0031593 polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
BP GO:0032091 negative regulation of protein binding IEP Predict GO terms from Neighborhoods
BP GO:0032228 regulation of synaptic transmission, GABAergic IEP Predict GO terms from Neighborhoods
CC GO:0032476 decaprenyl diphosphate synthase complex IEP Predict GO terms from Neighborhoods
BP GO:0032781 positive regulation of ATP-dependent activity IEP Predict GO terms from Neighborhoods
BP GO:0032879 regulation of localization IEP Predict GO terms from Neighborhoods
BP GO:0032880 regulation of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0033119 negative regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0033555 multicellular organismal response to stress IEP Predict GO terms from Neighborhoods
BP GO:0034213 quinolinate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034391 regulation of smooth muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0034393 positive regulation of smooth muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0035198 miRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0035254 glutamate receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0035255 ionotropic glutamate receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0042026 protein refolding IEP Predict GO terms from Neighborhoods
BP GO:0042181 ketone biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0042406 extrinsic component of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0042596 fear response IEP Predict GO terms from Neighborhoods
BP GO:0042981 regulation of apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043062 extracellular structure organization IEP Predict GO terms from Neighborhoods
BP GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043462 regulation of ATP-dependent activity IEP Predict GO terms from Neighborhoods
BP GO:0043489 RNA stabilization IEP Predict GO terms from Neighborhoods
BP GO:0043649 dicarboxylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044087 regulation of cellular component biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0044092 negative regulation of molecular function IEP Predict GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Predict GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045103 intermediate filament-based process IEP Predict GO terms from Neighborhoods
BP GO:0045104 intermediate filament cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0045109 intermediate filament organization IEP Predict GO terms from Neighborhoods
CC GO:0045120 pronucleus IEP Predict GO terms from Neighborhoods
BP GO:0045337 farnesyl diphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045338 farnesyl diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045861 negative regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
BP GO:0046874 quinolinate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048025 negative regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048149 behavioral response to ethanol IEP Predict GO terms from Neighborhoods
BP GO:0048255 mRNA stabilization IEP Predict GO terms from Neighborhoods
BP GO:0048259 regulation of receptor-mediated endocytosis IEP Predict GO terms from Neighborhoods
CC GO:0048471 perinuclear region of cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0048520 positive regulation of behavior IEP Predict GO terms from Neighborhoods
BP GO:0050686 negative regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050795 regulation of behavior IEP Predict GO terms from Neighborhoods
BP GO:0050854 regulation of antigen receptor-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0050856 regulation of T cell receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0050857 positive regulation of antigen receptor-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0050862 positive regulation of T cell receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0051082 unfolded protein binding IEP Predict GO terms from Neighborhoods
MF GO:0051087 chaperone binding IEP Predict GO terms from Neighborhoods
BP GO:0051100 negative regulation of binding IEP Predict GO terms from Neighborhoods
BP GO:0051123 RNA polymerase II preinitiation complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0051129 negative regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051248 negative regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predict GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0052923 all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity IEP Predict GO terms from Neighborhoods
MF GO:0052924 all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity IEP Predict GO terms from Neighborhoods
BP GO:0055063 sulfate ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060004 reflex IEP Predict GO terms from Neighborhoods
BP GO:0060013 righting reflex IEP Predict GO terms from Neighborhoods
BP GO:0060249 anatomical structure homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060341 regulation of cellular localization IEP Predict GO terms from Neighborhoods
BP GO:0060706 cell differentiation involved in embryonic placenta development IEP Predict GO terms from Neighborhoods
BP GO:0060710 chorio-allantoic fusion IEP Predict GO terms from Neighborhoods
BP GO:0060715 syncytiotrophoblast cell differentiation involved in labyrinthine layer development IEP Predict GO terms from Neighborhoods
BP GO:0060717 chorion development IEP Predict GO terms from Neighborhoods
MF GO:0061980 regulatory RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0070050 neuron cellular homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0070628 proteasome binding IEP Predict GO terms from Neighborhoods
BP GO:0070897 transcription preinitiation complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0070935 3'-UTR-mediated mRNA stabilization IEP Predict GO terms from Neighborhoods
BP GO:0071484 cellular response to light intensity IEP Predict GO terms from Neighborhoods
BP GO:0071486 cellular response to high light intensity IEP Predict GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071947 protein deubiquitination involved in ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072505 divalent inorganic anion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0072526 pyridine-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090083 regulation of inclusion body assembly IEP Predict GO terms from Neighborhoods
BP GO:0090084 negative regulation of inclusion body assembly IEP Predict GO terms from Neighborhoods
BP GO:0090085 regulation of protein deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0090086 negative regulation of protein deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0090325 regulation of locomotion involved in locomotory behavior IEP Predict GO terms from Neighborhoods
BP GO:0090326 positive regulation of locomotion involved in locomotory behavior IEP Predict GO terms from Neighborhoods
BP GO:0090407 organophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0090576 RNA polymerase III transcription regulator complex IEP Predict GO terms from Neighborhoods
MF GO:0097269 all-trans-decaprenyl-diphosphate synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0097428 protein maturation by iron-sulfur cluster transfer IEP Predict GO terms from Neighborhoods
CC GO:0097550 transcription preinitiation complex IEP Predict GO terms from Neighborhoods
CC GO:0098554 cytoplasmic side of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0098609 cell-cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:0099149 regulation of postsynaptic neurotransmitter receptor internalization IEP Predict GO terms from Neighborhoods
BP GO:0099601 regulation of neurotransmitter receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:0106035 protein maturation by [4Fe-4S] cluster transfer IEP Predict GO terms from Neighborhoods
MF GO:0140035 ubiquitination-like modification-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140036 ubiquitin-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140223 general transcription initiation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0140296 general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Predict GO terms from Neighborhoods
BP GO:1900034 regulation of cellular response to heat IEP Predict GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901661 quinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901663 quinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902369 negative regulation of RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902373 negative regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902767 isoprenoid biosynthetic process via mevalonate IEP Predict GO terms from Neighborhoods
BP GO:1903312 negative regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903321 negative regulation of protein modification by small protein conjugation or removal IEP Predict GO terms from Neighborhoods
BP GO:1903332 regulation of protein folding IEP Predict GO terms from Neighborhoods
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1903644 regulation of chaperone-mediated protein folding IEP Predict GO terms from Neighborhoods
BP GO:1903867 extraembryonic membrane development IEP Predict GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Predict GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Predict GO terms from Neighborhoods
BP GO:2000116 regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000117 negative regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000311 regulation of AMPA receptor activity IEP Predict GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001257 regulation of cation channel activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003734 DUF155 149 320
No external refs found!