| CC | GO:0000109 | nucleotide-excision repair complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000112 | nucleotide-excision repair factor 3 complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000153 | cytoplasmic ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000209 | protein polyubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000422 | autophagy of mitochondrion | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000438 | core TFIIH complex portion of holo TFIIH complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000439 | transcription factor TFIIH core complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002031 | G protein-coupled receptor internalization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002429 | immune response-activating cell surface receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002768 | immune response-regulating cell surface receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004629 | phospholipase C activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005484 | SNAP receptor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005507 | copper ion binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005737 | cytoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005740 | mitochondrial envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005813 | centrosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005815 | microtubule organizing center | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005850 | eukaryotic translation initiation factor 2 complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005851 | eukaryotic translation initiation factor 2B complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005938 | cell cortex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006414 | translational elongation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006446 | regulation of translational initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006448 | regulation of translational elongation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006508 | proteolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006513 | protein monoubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006515 | protein quality control for misfolded or incompletely synthesized proteins | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006878 | cellular copper ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006954 | inflammatory response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007005 | mitochondrion organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007059 | chromosome segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007204 | positive regulation of cytosolic calcium ion concentration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007338 | single fertilization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008013 | beta-catenin binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008242 | omega peptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008494 | translation activator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009056 | catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009266 | response to temperature stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009408 | response to heat | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009734 | auxin-activated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009755 | hormone-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009873 | ethylene-activated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009960 | endosperm development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010286 | heat acclimation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010289 | homogalacturonan biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010390 | histone monoubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010394 | homogalacturonan metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010413 | glucuronoxylan metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010601 | positive regulation of auxin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0012507 | ER to Golgi transport vesicle membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0014003 | oligodendrocyte development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016251 | RNA polymerase II general transcription initiation factor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016567 | protein ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016574 | histone ubiquitination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016920 | pyroglutamyl-peptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016925 | protein sumoylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0019005 | SCF ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019915 | lipid storage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021782 | glial cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030163 | protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030587 | sorocarp development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030674 | protein-macromolecule adaptor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031152 | aggregation involved in sorocarp development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031201 | SNARE complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031288 | sorocarp morphogenesis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031435 | mitogen-activated protein kinase kinase kinase binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031467 | Cul7-RING ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031519 | PcG protein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031623 | receptor internalization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032045 | guanyl-nucleotide exchange factor complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032056 | positive regulation of translation in response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032058 | positive regulation of translational initiation in response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032106 | positive regulation of response to extracellular stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032109 | positive regulation of response to nutrient levels | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032266 | phosphatidylinositol-3-phosphate binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032781 | positive regulation of ATP-dependent activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033081 | regulation of T cell differentiation in thymus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033522 | histone H2A ubiquitination | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0034045 | phagophore assembly site membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034389 | lipid droplet organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034497 | protein localization to phagophore assembly site | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034605 | cellular response to heat | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035295 | tube development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035518 | histone H2A monoubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035519 | protein K29-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0039020 | pronephric nephron tubule development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043130 | ubiquitin binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043162 | ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043223 | cytoplasmic SCF ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043555 | regulation of translation in response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043558 | regulation of translational initiation in response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044093 | positive regulation of molecular function | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044248 | cellular catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044314 | protein K27-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044804 | autophagy of nucleus | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0044877 | protein-containing complex binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0045182 | translation regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045580 | regulation of T cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045619 | regulation of lymphocyte differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045948 | positive regulation of translational initiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047262 | polygalacturonate 4-alpha-galacturonosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048015 | phosphatidylinositol-mediated signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048017 | inositol lipid-mediated signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048358 | mucilage pectin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050851 | antigen receptor-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050852 | T cell receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050863 | regulation of T cell activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051095 | regulation of helicase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051096 | positive regulation of helicase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051235 | maintenance of location | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051438 | regulation of ubiquitin-protein transferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051443 | positive regulation of ubiquitin-protein transferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051457 | maintenance of protein location in nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051703 | biological process involved in intraspecies interaction between organisms | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051865 | protein autoubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0052325 | cell wall pectin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055070 | copper ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0060090 | molecular adaptor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060429 | epithelium development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061326 | renal tubule development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061631 | ubiquitin conjugating enzyme activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061650 | ubiquitin-like protein conjugating enzyme activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061726 | mitochondrion disassembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0062078 | TSC1-TSC2 complex binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070534 | protein K63-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070628 | proteasome binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070816 | phosphorylation of RNA polymerase II C-terminal domain | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070936 | protein K48-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070979 | protein K11-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071230 | cellular response to amino acid stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071232 | cellular response to histidine | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071262 | regulation of translational initiation in response to starvation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071264 | positive regulation of translational initiation in response to starvation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071629 | cytoplasm protein quality control by the ubiquitin-proteasome system | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0071987 | WD40-repeat domain binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072009 | nephron epithelium development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072073 | kidney epithelium development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072080 | nephron tubule development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072344 | rescue of stalled ribosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072671 | mitochondria-associated ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0080025 | phosphatidylinositol-3,5-bisphosphate binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080052 | response to histidine | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080186 | developmental vegetative growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0085020 | protein K6-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090355 | positive regulation of auxin metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097602 | cullin family protein binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097730 | non-motile cilium | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097731 | 9+0 non-motile cilium | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097733 | photoreceptor cell cilium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0099120 | socially cooperative development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140223 | general transcription initiation factor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140455 | cytoplasm protein quality control | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140767 | enzyme-substrate adaptor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901575 | organic substance catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902105 | regulation of leukocyte differentiation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903832 | regulation of cellular response to amino acid starvation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903833 | positive regulation of cellular response to amino acid starvation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904424 | regulation of GTP binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904666 | regulation of ubiquitin protein ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904668 | positive regulation of ubiquitin protein ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905097 | regulation of guanyl-nucleotide exchange factor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905098 | negative regulation of guanyl-nucleotide exchange factor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905462 | regulation of DNA duplex unwinding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905464 | positive regulation of DNA duplex unwinding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905774 | regulation of DNA helicase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905776 | positive regulation of DNA helicase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990116 | ribosome-associated ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990234 | transferase complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990444 | F-box domain binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990756 | ubiquitin ligase-substrate adaptor activity | IEP | Predict GO terms from Neighborhoods |