SOLTUB.AGRIA.G00000018354


Description : Squamosa promoter binding protein NtabSPL13


Gene families : OG_02_0014870 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000018354
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_6


Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0009554 megasporogenesis IEA AHRD
BP GO:0009556 microsporogenesis IEA AHRD
BP GO:0010321 regulation of vegetative phase change IEA AHRD
BP GO:0042742 defense response to bacterium IEA AHRD
BP GO:0045893 positive regulation of DNA-templated transcription IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
BP GO:0048653 anther development IEA AHRD
BP GO:2000025 regulation of leaf formation IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP Predict GO terms from Neighborhoods
BP GO:0000429 carbon catabolite regulation of transcription from RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0000436 carbon catabolite activation of transcription from RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
MF GO:0001091 RNA polymerase II general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
BP GO:0001101 response to acid chemical IEP Predict GO terms from Neighborhoods
MF GO:0004048 anthranilate phosphoribosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004674 protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005452 solute:inorganic anion antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Predict GO terms from Neighborhoods
BP GO:0005513 detection of calcium ion IEP Predict GO terms from Neighborhoods
CC GO:0005637 nuclear inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006968 cellular defense response IEP Predict GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0007154 cell communication IEP Predict GO terms from Neighborhoods
BP GO:0007639 homeostasis of number of meristem cells IEP Predict GO terms from Neighborhoods
MF GO:0008081 phosphoric diester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0008219 cell death IEP Predict GO terms from Neighborhoods
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP Predict GO terms from Neighborhoods
BP GO:0009415 response to water IEP Predict GO terms from Neighborhoods
BP GO:0009624 response to nematode IEP Predict GO terms from Neighborhoods
BP GO:0009737 response to abscisic acid IEP Predict GO terms from Neighborhoods
BP GO:0009751 response to salicylic acid IEP Predict GO terms from Neighborhoods
BP GO:0009866 induced systemic resistance, ethylene mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0010036 response to boron-containing substance IEP Predict GO terms from Neighborhoods
BP GO:0010099 regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010200 response to chitin IEP Predict GO terms from Neighborhoods
BP GO:0012501 programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0014070 response to organic cyclic compound IEP Predict GO terms from Neighborhoods
MF GO:0015026 coreceptor activity IEP Predict GO terms from Neighborhoods
MF GO:0015301 obsolete anion:anion antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0016251 RNA polymerase II general transcription initiation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Predict GO terms from Neighborhoods
CC GO:0016602 CCAAT-binding factor complex IEP Predict GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predict GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0017025 TBP-class protein binding IEP Predict GO terms from Neighborhoods
CC GO:0017054 negative cofactor 2 complex IEP Predict GO terms from Neighborhoods
BP GO:0030912 response to deep water IEP Predict GO terms from Neighborhoods
BP GO:0031667 response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0031668 cellular response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0031669 cellular response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0033993 response to lipid IEP Predict GO terms from Neighborhoods
BP GO:0035445 borate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0036003 positive regulation of transcription from RNA polymerase II promoter in response to stress IEP Predict GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Predict GO terms from Neighborhoods
BP GO:0045990 carbon catabolite regulation of transcription IEP Predict GO terms from Neighborhoods
BP GO:0045991 carbon catabolite activation of transcription IEP Predict GO terms from Neighborhoods
BP GO:0046713 borate transport IEP Predict GO terms from Neighborhoods
MF GO:0046715 active borate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0048873 homeostasis of number of cells within a tissue IEP Predict GO terms from Neighborhoods
BP GO:0051123 RNA polymerase II preinitiation complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0051365 cellular response to potassium ion starvation IEP Predict GO terms from Neighborhoods
BP GO:0061062 regulation of nematode larval development IEP Predict GO terms from Neighborhoods
BP GO:0061408 positive regulation of transcription from RNA polymerase II promoter in response to heat stress IEP Predict GO terms from Neighborhoods
BP GO:0070897 transcription preinitiation complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0071496 cellular response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0080029 cellular response to boron-containing substance levels IEP Predict GO terms from Neighborhoods
MF GO:0080139 borate efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0080169 cellular response to boron-containing substance deprivation IEP Predict GO terms from Neighborhoods
CC GO:0090571 RNA polymerase II transcription repressor complex IEP Predict GO terms from Neighborhoods
BP GO:0097305 response to alcohol IEP Predict GO terms from Neighborhoods
MF GO:0106310 protein serine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Predict GO terms from Neighborhoods
MF GO:0140323 solute:anion antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Predict GO terms from Neighborhoods
BP GO:1905034 regulation of antifungal innate immune response IEP Predict GO terms from Neighborhoods
BP GO:1990359 stress response to zinc ion IEP Predict GO terms from Neighborhoods
BP GO:1990532 stress response to nickel ion IEP Predict GO terms from Neighborhoods
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2000030 regulation of response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:2000306 positive regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000905 negative regulation of starch metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036893 SBP_sf 20 101
IPR004333 SBP_dom 22 95
No external refs found!