SOLTUB.AGRIA.G00000019273


Description : Eukaryotic translation initiation factor 1a


Gene families : OG_02_0000920 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019273
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_212


Type GO Term Name Evidence Source
BP GO:0001677 formation of translation initiation ternary complex IEA AHRD
BP GO:0001731 formation of translation preinitiation complex IEA AHRD
BP GO:0001732 formation of cytoplasmic translation initiation complex IEA AHRD
BP GO:0002188 translation reinitiation IEA AHRD
MF GO:0003725 double-stranded RNA binding IEA AHRD
MF GO:0003743 translation initiation factor activity IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0016282 eukaryotic 43S preinitiation complex IEA AHRD
MF GO:0019901 protein kinase binding IEA AHRD
MF GO:0031369 translation initiation factor binding IEA AHRD
CC GO:0033290 eukaryotic 48S preinitiation complex IEA AHRD
MF GO:0043023 ribosomal large subunit binding IEA AHRD
MF GO:0043024 ribosomal small subunit binding IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Predict GO terms from Neighborhoods
CC GO:0000325 plant-type vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000329 fungal-type vacuole membrane IEP Predict GO terms from Neighborhoods
CC GO:0005746 mitochondrial respirasome IEP Predict GO terms from Neighborhoods
CC GO:0005813 centrosome IEP Predict GO terms from Neighborhoods
CC GO:0005929 cilium IEP Predict GO terms from Neighborhoods
BP GO:0006405 RNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006406 mRNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006606 protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006885 regulation of pH IEP Predict GO terms from Neighborhoods
BP GO:0006892 post-Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0006896 Golgi to vacuole transport IEP Predict GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0007034 vacuolar transport IEP Predict GO terms from Neighborhoods
BP GO:0007035 vacuolar acidification IEP Predict GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Predict GO terms from Neighborhoods
MF GO:0008553 P-type proton-exporting transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0010506 regulation of autophagy IEP Predict GO terms from Neighborhoods
MF GO:0015078 proton transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015399 primary active transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015662 P-type ion transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Predict GO terms from Neighborhoods
BP GO:0016241 regulation of macroautophagy IEP Predict GO terms from Neighborhoods
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predict GO terms from Neighborhoods
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predict GO terms from Neighborhoods
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0030030 cell projection organization IEP Predict GO terms from Neighborhoods
BP GO:0030031 cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0030641 regulation of cellular pH IEP Predict GO terms from Neighborhoods
CC GO:0030667 secretory granule membrane IEP Predict GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Predict GO terms from Neighborhoods
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predict GO terms from Neighborhoods
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predict GO terms from Neighborhoods
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Predict GO terms from Neighborhoods
CC GO:0033181 plasma membrane proton-transporting V-type ATPase complex IEP Predict GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Predict GO terms from Neighborhoods
BP GO:0034504 protein localization to nucleus IEP Predict GO terms from Neighborhoods
CC GO:0035579 specific granule membrane IEP Predict GO terms from Neighborhoods
CC GO:0042272 nuclear RNA export factor complex IEP Predict GO terms from Neighborhoods
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0044613 nuclear pore central transport channel IEP Predict GO terms from Neighborhoods
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predict GO terms from Neighborhoods
BP GO:0044782 cilium organization IEP Predict GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Predict GO terms from Neighborhoods
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predict GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Predict GO terms from Neighborhoods
BP GO:0050657 nucleic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0050658 RNA transport IEP Predict GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0051028 mRNA transport IEP Predict GO terms from Neighborhoods
BP GO:0051168 nuclear export IEP Predict GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Predict GO terms from Neighborhoods
BP GO:0051170 import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0051236 establishment of RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0051452 intracellular pH reduction IEP Predict GO terms from Neighborhoods
BP GO:0051453 regulation of intracellular pH IEP Predict GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Predict GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Predict GO terms from Neighborhoods
BP GO:0055067 monovalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060271 cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:0061512 protein localization to cilium IEP Predict GO terms from Neighborhoods
CC GO:0070469 respirasome IEP Predict GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Predict GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098852 lytic vacuole membrane IEP Predict GO terms from Neighborhoods
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0120036 plasma membrane bounded cell projection organization IEP Predict GO terms from Neighborhoods
MF GO:0140358 P-type transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1902600 proton transmembrane transport IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006196 RNA-binding_domain_S1_IF1 32 93
IPR001253 TIF_eIF-1A 14 110
IPR012340 NA-bd_OB-fold 2 144
No external refs found!