SOLTUB.AGRIA.G00000019350


Description : Casein kinase II subunit beta


Gene families : OG_02_0001195 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019350
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_248


Type GO Term Name Evidence Source
CC GO:0000785 chromatin IEA AHRD
MF GO:0003682 chromatin binding IEA AHRD
MF GO:0004674 protein serine/threonine kinase activity IEA AHRD
MF GO:0005102 signaling receptor binding IEA AHRD
CC GO:0005576 extracellular region IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
CC GO:0005956 protein kinase CK2 complex IEA AHRD
BP GO:0007310 oocyte dorsal/ventral axis specification IEA AHRD
BP GO:0008062 eclosion rhythm IEA AHRD
MF GO:0008134 transcription factor binding IEA AHRD
BP GO:0008285 negative regulation of cell population proliferation IEA AHRD
BP GO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylation IEA AHRD
BP GO:0016319 mushroom body development IEA AHRD
CC GO:0016363 nuclear matrix IEA AHRD
BP GO:0018107 peptidyl-threonine phosphorylation IEA AHRD
MF GO:0019887 protein kinase regulator activity IEA AHRD
MF GO:0019904 protein domain specific binding IEA AHRD
CC GO:0030424 axon IEA AHRD
CC GO:0030425 dendrite IEA AHRD
CC GO:0031519 PcG protein complex IEA AHRD
CC GO:0031594 neuromuscular junction IEA AHRD
BP GO:0032927 positive regulation of activin receptor signaling pathway IEA AHRD
BP GO:0033211 adiponectin-activated signaling pathway IEA AHRD
BP GO:0033574 response to testosterone IEA AHRD
CC GO:0034456 UTP-C complex IEA AHRD
CC GO:0034774 secretory granule lumen IEA AHRD
BP GO:0042753 positive regulation of circadian rhythm IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
MF GO:0043021 ribonucleoprotein complex binding IEA AHRD
CC GO:0043025 neuronal cell body IEA AHRD
BP GO:0043537 negative regulation of blood vessel endothelial cell migration IEA AHRD
BP GO:0045475 locomotor rhythm IEA AHRD
BP GO:0046719 regulation by virus of viral protein levels in host cell IEA AHRD
BP GO:0048573 photoperiodism, flowering IEA AHRD
BP GO:0050807 regulation of synapse organization IEA AHRD
BP GO:0051101 regulation of DNA binding IEA AHRD
BP GO:0060810 intracellular mRNA localization involved in pattern specification process IEA AHRD
BP GO:0061154 endothelial tube morphogenesis IEA AHRD
BP GO:0071900 regulation of protein serine/threonine kinase activity IEA AHRD
BP GO:0080163 regulation of protein serine/threonine phosphatase activity IEA AHRD
BP GO:0090053 positive regulation of pericentric heterochromatin formation IEA AHRD
BP GO:0097421 liver regeneration IEA AHRD
CC GO:0097730 non-motile cilium IEA AHRD
CC GO:0098685 Schaffer collateral - CA1 synapse IEA AHRD
CC GO:0098978 glutamatergic synapse IEA AHRD
BP GO:0099170 postsynaptic modulation of chemical synaptic transmission IEA AHRD
CC GO:0099523 presynaptic cytosol IEA AHRD
CC GO:1904813 ficolin-1-rich granule lumen IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predict GO terms from Neighborhoods
BP GO:0000266 mitochondrial fission IEP Predict GO terms from Neighborhoods
BP GO:0000768 syncytium formation by plasma membrane fusion IEP Predict GO terms from Neighborhoods
MF GO:0001671 ATPase activator activity IEP Predict GO terms from Neighborhoods
CC GO:0001917 photoreceptor inner segment IEP Predict GO terms from Neighborhoods
BP GO:0002097 tRNA wobble base modification IEP Predict GO terms from Neighborhoods
BP GO:0002098 tRNA wobble uridine modification IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003725 double-stranded RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004096 catalase activity IEP Predict GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Predict GO terms from Neighborhoods
MF GO:0005262 calcium channel activity IEP Predict GO terms from Neighborhoods
CC GO:0005637 nuclear inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0005784 Sec61 translocon complex IEP Predict GO terms from Neighborhoods
CC GO:0005788 endoplasmic reticulum lumen IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0005793 endoplasmic reticulum-Golgi intermediate compartment IEP Predict GO terms from Neighborhoods
BP GO:0006458 'de novo' protein folding IEP Predict GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation IEP Predict GO terms from Neighborhoods
BP GO:0006626 protein targeting to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0006810 transport IEP Predict GO terms from Neighborhoods
BP GO:0006839 mitochondrial transport IEP Predict GO terms from Neighborhoods
BP GO:0006906 vesicle fusion IEP Predict GO terms from Neighborhoods
BP GO:0006937 regulation of muscle contraction IEP Predict GO terms from Neighborhoods
BP GO:0006949 syncytium formation IEP Predict GO terms from Neighborhoods
BP GO:0006986 response to unfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0007029 endoplasmic reticulum organization IEP Predict GO terms from Neighborhoods
BP GO:0007084 mitotic nuclear membrane reassembly IEP Predict GO terms from Neighborhoods
BP GO:0007286 spermatid development IEP Predict GO terms from Neighborhoods
BP GO:0007406 negative regulation of neuroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0007447 imaginal disc pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0007520 myoblast fusion IEP Predict GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Predict GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predict GO terms from Neighborhoods
MF GO:0008320 protein transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0008589 regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0008637 apoptotic mitochondrial changes IEP Predict GO terms from Neighborhoods
CC GO:0009510 plasmodesmatal desmotubule IEP Predict GO terms from Neighborhoods
CC GO:0009514 glyoxysome IEP Predict GO terms from Neighborhoods
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Predict GO terms from Neighborhoods
BP GO:0009584 detection of visible light IEP Predict GO terms from Neighborhoods
BP GO:0009616 RNAi-mediated antiviral immune response IEP Predict GO terms from Neighborhoods
BP GO:0009649 entrainment of circadian clock IEP Predict GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Predict GO terms from Neighborhoods
BP GO:0009954 proximal/distal pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0009957 epidermal cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010026 trichome differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010088 phloem development IEP Predict GO terms from Neighborhoods
BP GO:0010115 regulation of abscisic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010116 positive regulation of abscisic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010262 somatic embryogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010267 ta-siRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0010344 seed oilbody biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010371 regulation of gibberellin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010373 negative regulation of gibberellin biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0010445 nuclear dicing body IEP Predict GO terms from Neighborhoods
BP GO:0010458 exit from mitosis IEP Predict GO terms from Neighborhoods
BP GO:0010515 negative regulation of induction of conjugation with cellular fusion IEP Predict GO terms from Neighborhoods
BP GO:0010589 leaf proximal/distal pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010600 regulation of auxin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010601 positive regulation of auxin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010721 negative regulation of cell development IEP Predict GO terms from Neighborhoods
BP GO:0010824 regulation of centrosome duplication IEP Predict GO terms from Neighborhoods
BP GO:0010842 retina layer formation IEP Predict GO terms from Neighborhoods
BP GO:0010942 positive regulation of cell death IEP Predict GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Predict GO terms from Neighborhoods
MF GO:0015450 protein-transporting ATPase activity IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0016604 nuclear body IEP Predict GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0021986 habenula development IEP Predict GO terms from Neighborhoods
MF GO:0022884 macromolecule transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0030134 COPII-coated ER to Golgi transport vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030173 integral component of Golgi membrane IEP Predict GO terms from Neighborhoods
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0030177 positive regulation of Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030422 siRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0030544 Hsp70 protein binding IEP Predict GO terms from Neighborhoods
CC GO:0030666 endocytic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030670 phagocytic vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031054 pre-miRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031137 regulation of conjugation with cellular fusion IEP Predict GO terms from Neighborhoods
BP GO:0031138 negative regulation of conjugation with cellular fusion IEP Predict GO terms from Neighborhoods
BP GO:0031204 post-translational protein targeting to membrane, translocation IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0031228 intrinsic component of Golgi membrane IEP Predict GO terms from Neighborhoods
CC GO:0031300 intrinsic component of organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031301 integral component of organelle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031468 nuclear membrane reassembly IEP Predict GO terms from Neighborhoods
BP GO:0031930 mitochondria-nucleus signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0032352 positive regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034260 negative regulation of GTPase activity IEP Predict GO terms from Neighborhoods
BP GO:0034341 response to interferon-gamma IEP Predict GO terms from Neighborhoods
BP GO:0034394 protein localization to cell surface IEP Predict GO terms from Neighborhoods
BP GO:0035195 miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0035196 miRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0035198 miRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0035279 miRNA-mediated gene silencing by mRNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0035967 cellular response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
BP GO:0039019 pronephric nephron development IEP Predict GO terms from Neighborhoods
BP GO:0042981 regulation of apoptotic process IEP Predict GO terms from Neighborhoods
MF GO:0043022 ribosome binding IEP Predict GO terms from Neighborhoods
BP GO:0043065 positive regulation of apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043068 positive regulation of programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0043153 entrainment of circadian clock by photoperiod IEP Predict GO terms from Neighborhoods
BP GO:0043525 positive regulation of neuron apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043653 mitochondrial fragmentation involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0045048 protein insertion into ER membrane IEP Predict GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0045827 negative regulation of isoprenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045828 positive regulation of isoprenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045833 negative regulation of lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045880 positive regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0046599 regulation of centriole replication IEP Predict GO terms from Neighborhoods
BP GO:0046605 regulation of centrosome cycle IEP Predict GO terms from Neighborhoods
BP GO:0046886 positive regulation of hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Predict GO terms from Neighborhoods
BP GO:0050768 negative regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050779 RNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0050906 detection of stimulus involved in sensory perception IEP Predict GO terms from Neighborhoods
BP GO:0050908 detection of light stimulus involved in visual perception IEP Predict GO terms from Neighborhoods
BP GO:0050962 detection of light stimulus involved in sensory perception IEP Predict GO terms from Neighborhoods
BP GO:0051055 negative regulation of lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051084 'de novo' post-translational protein folding IEP Predict GO terms from Neighborhoods
BP GO:0051085 chaperone cofactor-dependent protein refolding IEP Predict GO terms from Neighborhoods
BP GO:0051205 protein insertion into membrane IEP Predict GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Predict GO terms from Neighborhoods
BP GO:0051788 response to misfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0051961 negative regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0055063 sulfate ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060059 embryonic retina morphogenesis in camera-type eye IEP Predict GO terms from Neighborhoods
BP GO:0060341 regulation of cellular localization IEP Predict GO terms from Neighborhoods
BP GO:0060628 regulation of ER to Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0061157 mRNA destabilization IEP Predict GO terms from Neighborhoods
MF GO:0061980 regulatory RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0070262 peptidyl-serine dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0070585 protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
CC GO:0070971 endoplasmic reticulum exit site IEP Predict GO terms from Neighborhoods
BP GO:0071218 cellular response to misfolded protein IEP Predict GO terms from Neighborhoods
CC GO:0071256 translocon complex IEP Predict GO terms from Neighborhoods
CC GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0071484 cellular response to light intensity IEP Predict GO terms from Neighborhoods
BP GO:0071486 cellular response to high light intensity IEP Predict GO terms from Neighborhoods
BP GO:0071709 membrane assembly IEP Predict GO terms from Neighborhoods
BP GO:0071763 nuclear membrane organization IEP Predict GO terms from Neighborhoods
CC GO:0071782 endoplasmic reticulum tubular network IEP Predict GO terms from Neighborhoods
BP GO:0071786 endoplasmic reticulum tubular network organization IEP Predict GO terms from Neighborhoods
BP GO:0072006 nephron development IEP Predict GO terms from Neighborhoods
BP GO:0072505 divalent inorganic anion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0072655 establishment of protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0080167 response to karrikin IEP Predict GO terms from Neighborhoods
BP GO:0090174 organelle membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0090257 regulation of muscle system process IEP Predict GO terms from Neighborhoods
BP GO:0090263 positive regulation of canonical Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0090355 positive regulation of auxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0097120 receptor localization to synapse IEP Predict GO terms from Neighborhoods
CC GO:0098827 endoplasmic reticulum subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0101024 mitotic nuclear membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0140253 cell-cell fusion IEP Predict GO terms from Neighborhoods
MF GO:0140318 protein transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Predict GO terms from Neighborhoods
BP GO:1900618 regulation of shoot system morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1901216 positive regulation of neuron death IEP Predict GO terms from Neighborhoods
BP GO:1901371 regulation of leaf morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1902692 regulation of neuroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:1902932 positive regulation of alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903047 mitotic cell cycle process IEP Predict GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Predict GO terms from Neighborhoods
BP GO:2000177 regulation of neural precursor cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:2000178 negative regulation of neural precursor cell proliferation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000704 Casein_kinase_II_reg-sub 100 283
IPR035991 Casein_kinase_II_beta-like 98 286
No external refs found!