| MF | GO:0000062 | fatty-acyl-CoA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005731 | nucleolus organizer region | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006417 | regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006482 | protein demethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007143 | female meiotic nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007165 | signal transduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008214 | protein dealkylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008381 | mechanosensitive ion channel activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009561 | megagametogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009616 | RNAi-mediated antiviral immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009637 | response to blue light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009648 | photoperiodism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009664 | plant-type cell wall organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009733 | response to auxin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009734 | auxin-activated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009739 | response to gibberellin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009744 | response to sucrose | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009755 | hormone-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009785 | blue light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009788 | negative regulation of abscisic acid-activated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009827 | plant-type cell wall modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009828 | plant-type cell wall loosening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009934 | regulation of meristem structural organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009942 | longitudinal axis specification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009965 | leaf morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009968 | negative regulation of signal transduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010018 | far-red light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010050 | vegetative phase change | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010094 | specification of carpel identity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010267 | ta-siRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010305 | leaf vascular tissue pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010311 | lateral root formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010422 | regulation of brassinosteroid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010497 | plasmodesmata-mediated intercellular transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010559 | regulation of glycoprotein biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010561 | negative regulation of glycoprotein biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010586 | miRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010599 | lsiRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010648 | negative regulation of cell communication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010893 | positive regulation of steroid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010930 | negative regulation of auxin mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0015630 | microtubule cytoskeleton | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016407 | acetyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016413 | O-acetyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016442 | RISC complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016577 | histone demethylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017148 | negative regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0023057 | negative regulation of signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030308 | negative regulation of cell growth | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030874 | nucleolar chromatin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031054 | pre-miRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031332 | RNAi effector complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033169 | histone H3-K9 demethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034249 | negative regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034285 | response to disaccharide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035019 | somatic stem cell population maintenance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035067 | negative regulation of histone acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035195 | miRNA-mediated gene silencing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035198 | miRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035279 | miRNA-mediated gene silencing by mRNA destabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036473 | cell death in response to oxidative stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040034 | regulation of development, heterochronic | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042802 | identical protein binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042803 | protein homodimerization activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042984 | regulation of amyloid precursor protein biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042985 | negative regulation of amyloid precursor protein biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043476 | pigment accumulation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043478 | pigment accumulation in response to UV light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043479 | pigment accumulation in tissues in response to UV light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043480 | pigment accumulation in tissues | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043481 | anthocyanin accumulation in tissues in response to UV light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044042 | glucan metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045926 | negative regulation of growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045940 | positive regulation of steroid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046886 | positive regulation of hormone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046983 | protein dimerization activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048364 | root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048366 | leaf development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048446 | petal morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048497 | maintenance of floral organ identity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048506 | regulation of timing of meristematic phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048509 | regulation of meristem development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048573 | photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048576 | positive regulation of short-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048577 | negative regulation of short-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048580 | regulation of post-embryonic development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048582 | positive regulation of post-embryonic development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048585 | negative regulation of response to stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048598 | embryonic morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048826 | cotyledon morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048827 | phyllome development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048830 | adventitious root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050793 | regulation of developmental process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050810 | regulation of steroid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050982 | detection of mechanical stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051093 | negative regulation of developmental process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051248 | negative regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051574 | positive regulation of histone H3-K9 methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055046 | microgametogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060211 | regulation of nuclear-transcribed mRNA poly(A) tail shortening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060213 | positive regulation of nuclear-transcribed mRNA poly(A) tail shortening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061866 | obsolete negative regulation of histone H3-S10 phosphorylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061980 | regulatory RNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070076 | histone lysine demethylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070551 | endoribonuclease activity, cleaving siRNA-paired mRNA | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070578 | RISC-loading complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071490 | cellular response to far red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080022 | primary root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090030 | regulation of steroid hormone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0090624 | endoribonuclease activity, cleaving miRNA-paired mRNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090625 | siRNA-mediated gene silencing by mRNA destabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090698 | post-embryonic plant morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090700 | maintenance of plant organ identity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097468 | programmed cell death in response to reactive oxygen species | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0099402 | plant organ development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0120227 | acyl-CoA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140766 | siRNA-mediated gene silencing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900109 | regulation of histone H3-K9 dimethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900111 | positive regulation of histone H3-K9 dimethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900151 | regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900153 | positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901420 | negative regulation of response to alcohol | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1901567 | fatty acid derivative binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901984 | negative regulation of protein acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902183 | regulation of shoot apical meristem development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902446 | regulation of shade avoidance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902448 | positive regulation of shade avoidance | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902555 | endoribonuclease complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903018 | regulation of glycoprotein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903019 | negative regulation of glycoprotein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903341 | regulation of meiotic DNA double-strand break formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903343 | positive regulation of meiotic DNA double-strand break formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1905348 | endonuclease complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905393 | plant organ formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905958 | negative regulation of cellular response to alcohol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000026 | regulation of multicellular organismal development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000030 | regulation of response to red or far red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000033 | regulation of seed dormancy process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000241 | regulation of reproductive process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000243 | positive regulation of reproductive process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000488 | positive regulation of brassinosteroid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000615 | regulation of histone H3-K9 acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000616 | negative regulation of histone H3-K9 acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000757 | negative regulation of peptidyl-lysine acetylation | IEP | Predict GO terms from Neighborhoods |