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  5. SOLTUB.AGRIA.G00000019635

SOLTUB.AGRIA.G00000019635


Description : Expansin-b5


Gene families : OG_02_0027225 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019635
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_48


Type GO Term Name Evidence Source
BP GO:0006949 syncytium formation IEA AHRD
CC GO:0009506 plasmodesma IEA AHRD
BP GO:0071555 cell wall organization IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0001055 RNA polymerase II activity IEP Predict GO terms from Neighborhoods
MF GO:0001882 nucleoside binding IEP Predict GO terms from Neighborhoods
MF GO:0003838 sterol 24-C-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004180 carboxypeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004185 serine-type carboxypeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004338 glucan exo-1,3-beta-glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predict GO terms from Neighborhoods
MF GO:0004613 phosphoenolpyruvate carboxykinase (GTP) activity IEP Predict GO terms from Neighborhoods
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005313 L-glutamate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005342 organic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005351 carbohydrate:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005354 galactose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005356 glucose:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005358 high-affinity glucose:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005402 carbohydrate:cation symporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005665 RNA polymerase II, core complex IEP Predict GO terms from Neighborhoods
CC GO:0005666 RNA polymerase III complex IEP Predict GO terms from Neighborhoods
CC GO:0005773 vacuole IEP Predict GO terms from Neighborhoods
CC GO:0005887 integral component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0005996 monosaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006006 glucose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006083 acetate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006094 gluconeogenesis IEP Predict GO terms from Neighborhoods
BP GO:0006696 ergosterol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006865 amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0008156 negative regulation of DNA replication IEP Predict GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008169 C-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008171 O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0008204 ergosterol metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008506 sucrose:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0008515 sucrose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0008643 carbohydrate transport IEP Predict GO terms from Neighborhoods
BP GO:0008645 hexose transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008810 cellulase activity IEP Predict GO terms from Neighborhoods
MF GO:0009669 sucrose:cation symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0009679 hexose:proton symporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009746 response to hexose IEP Predict GO terms from Neighborhoods
BP GO:0009749 response to glucose IEP Predict GO terms from Neighborhoods
BP GO:0009820 alkaloid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0009986 cell surface IEP Predict GO terms from Neighborhoods
CC GO:0010282 senescence-associated vacuole IEP Predict GO terms from Neighborhoods
MF GO:0010331 gibberellin binding IEP Predict GO terms from Neighborhoods
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0010341 gibberellin carboxyl-O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010930 negative regulation of auxin mediated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015146 pentose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015154 disaccharide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015171 amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015180 L-alanine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015183 L-aspartate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015293 symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015578 mannose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Predict GO terms from Neighborhoods
BP GO:0015749 monosaccharide transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015750 pentose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015751 arabinose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015757 galactose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015802 basic amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015808 L-alanine transport IEP Predict GO terms from Neighborhoods
BP GO:0015976 carbon utilization IEP Predict GO terms from Neighborhoods
BP GO:0016036 cellular response to phosphate starvation IEP Predict GO terms from Neighborhoods
BP GO:0016129 phytosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016441 post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predict GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0019010 farnesoic acid O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0019318 hexose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019319 hexose biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0019840 isoprenoid binding IEP Predict GO terms from Neighborhoods
MF GO:0022858 alanine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0030749 loganate O-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0030797 24-methylenesterol C-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0031047 gene silencing by RNA IEP Predict GO terms from Neighborhoods
CC GO:0031226 intrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0032328 alanine transport IEP Predict GO terms from Neighborhoods
BP GO:0032481 positive regulation of type I interferon production IEP Predict GO terms from Neighborhoods
MF GO:0032549 ribonucleoside binding IEP Predict GO terms from Neighborhoods
CC GO:0032578 aleurone grain membrane IEP Predict GO terms from Neighborhoods
BP GO:0032648 regulation of interferon-beta production IEP Predict GO terms from Neighborhoods
BP GO:0032728 positive regulation of interferon-beta production IEP Predict GO terms from Neighborhoods
BP GO:0032875 regulation of DNA endoreduplication IEP Predict GO terms from Neighborhoods
BP GO:0032876 negative regulation of DNA endoreduplication IEP Predict GO terms from Neighborhoods
BP GO:0034219 carbohydrate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0034284 response to monosaccharide IEP Predict GO terms from Neighborhoods
BP GO:0035194 post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0035195 miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0035834 indole alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042882 L-arabinose transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0042900 arabinose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0044107 cellular alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044108 cellular alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046364 monosaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
MF GO:0051119 sugar transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0051749 indole acetic acid carboxyl methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0055055 D-glucose:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0055056 D-glucose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0070008 serine-type exopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0070778 L-aspartate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0080027 response to herbivore IEP Predict GO terms from Neighborhoods
BP GO:0097384 cellular lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0098712 L-glutamate import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1900140 regulation of seedling development IEP Predict GO terms from Neighborhoods
BP GO:1990169 stress response to copper ion IEP Predict GO terms from Neighborhoods
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036908 RlpA-like_sf 39 161
IPR009009 RlpA-like_DPBB 79 153
No external refs found!