SOLTUB.AGRIA.G00000020005

Description : Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein, putative

Gene families : OG_02_0019852 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000020005
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_154

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0003008	system process	None	Extended
BP	GO:0003013	circulatory system process	None	Extended
BP	GO:0003018	vascular process in circulatory system	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009414	response to water deprivation	None	Extended
BP	GO:0009415	response to water	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEA	AHRD
BP	GO:0009845	seed germination	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010232	vascular transport	None	Extended
BP	GO:0010233	phloem transport	IEA	AHRD
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0033500	carbohydrate homeostasis	IEA	AHRD
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0042631	cellular response to water deprivation	IEA	AHRD
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071229	cellular response to acid chemical	None	Extended
BP	GO:0071462	cellular response to water stimulus	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0080167	response to karrikin	IEA	AHRD
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:1902347	response to strigolactone	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	IEP	Predict GO terms from Neighborhoods
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005262	calcium channel activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005730	nucleolus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007389	pattern specification process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008219	cell death	IEP	Predict GO terms from Neighborhoods
MF	GO:0008270	zinc ion binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008381	mechanosensitive ion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008408	3'-5' exonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008810	cellulase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0009531	secondary cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0009607	response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009611	response to wounding	IEP	Predict GO terms from Neighborhoods
BP	GO:0009625	response to insect	IEP	Predict GO terms from Neighborhoods
BP	GO:0009664	plant-type cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009753	response to jasmonic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009828	plant-type cell wall loosening	IEP	Predict GO terms from Neighborhoods
BP	GO:0009838	abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0009888	tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009956	radial pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010052	guard cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010065	primary meristem tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010067	procambium histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010080	regulation of floral meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010087	phloem or xylem histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010088	phloem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010118	stomatal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0010200	response to chitin	IEP	Predict GO terms from Neighborhoods
BP	GO:0010227	floral organ abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0010243	response to organonitrogen compound	IEP	Predict GO terms from Neighborhoods
BP	GO:0010439	regulation of glucosinolate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010496	intercellular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010497	plasmodesmata-mediated intercellular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0022604	regulation of cell morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030245	cellulose catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0030863	cortical cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0030970	retrograde protein transport, ER to cytosol	IEP	Predict GO terms from Neighborhoods
BP	GO:0032502	developmental process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032527	protein exit from endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
BP	GO:0032881	regulation of polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0034098	VCP-NPL4-UFD1 AAA ATPase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034389	lipid droplet organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0035473	lipase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0036289	peptidyl-serine autophosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0036473	cell death in response to oxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0042762	regulation of sulfur metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043207	response to external biotic stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043455	regulation of secondary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Predict GO terms from Neighborhoods
BP	GO:0048507	meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048508	embryonic meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048638	regulation of developmental growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0048832	specification of plant organ number	IEP	Predict GO terms from Neighborhoods
BP	GO:0048833	specification of floral organ number	IEP	Predict GO terms from Neighborhoods
BP	GO:0048856	anatomical structure development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050793	regulation of developmental process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050982	detection of mechanical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051275	beta-glucan catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051510	regulation of unidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0051707	response to other organism	IEP	Predict GO terms from Neighborhoods
CC	GO:0055044	symplast	IEP	Predict GO terms from Neighborhoods
MF	GO:0055102	lipase inhibitor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0062012	regulation of small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0065001	specification of axis polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070542	response to fatty acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0090057	root radial pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090627	plant epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0097468	programmed cell death in response to reactive oxygen species	IEP	Predict GO terms from Neighborhoods
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900457	regulation of brassinosteroid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1901698	response to nitrogen compound	IEP	Predict GO terms from Neighborhoods
BP	GO:1902066	regulation of cell wall pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903513	endoplasmic reticulum to cytosol transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1904424	regulation of GTP binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1904426	positive regulation of GTP binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1905097	regulation of guanyl-nucleotide exchange factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1905099	positive regulation of guanyl-nucleotide exchange factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1990059	fruit valve development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000280	regulation of root development	IEP	Predict GO terms from Neighborhoods
BP	GO:2001108	positive regulation of Rho guanyl-nucleotide exchange factor activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004176	Clp_R_dom	22	50
IPR004176	Clp_R_dom	122	166
IPR036628	Clp_N_dom_sf	11	162

External Links

No external refs found!

SOLTUB.AGRIA.G00000020005

Expression Profile

Co-expression Networks

Functional Annotation