SOLTUB.AGRIA.G00000020473


Description : LOB domain-containing protein, putative


Gene families : OG_02_0027692 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000020473
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_26


Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005739 mitochondrion IEA AHRD
BP GO:0009799 specification of symmetry IEA AHRD
BP GO:0009944 polarity specification of adaxial/abaxial axis IEA AHRD
BP GO:0009954 proximal/distal pattern formation IEA AHRD
BP GO:0009965 leaf morphogenesis IEA AHRD
BP GO:0010087 phloem or xylem histogenesis IEA AHRD
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEA AHRD
BP GO:0010311 lateral root formation IEA AHRD
BP GO:0010628 positive regulation of gene expression IEA AHRD
BP GO:0045893 positive regulation of DNA-templated transcription IEA AHRD
BP GO:0048441 petal development IEA AHRD
BP GO:1905177 tracheary element differentiation IEA AHRD
Type GO Term Name Evidence Source
BP GO:0002229 defense response to oomycetes IEP Predict GO terms from Neighborhoods
MF GO:0004497 monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0005216 ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005261 cation channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005262 calcium channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005388 P-type calcium transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005887 integral component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0006816 calcium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006874 cellular calcium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0006935 chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Predict GO terms from Neighborhoods
BP GO:0006952 defense response IEP Predict GO terms from Neighborhoods
BP GO:0007600 sensory perception IEP Predict GO terms from Neighborhoods
BP GO:0007605 sensory perception of sound IEP Predict GO terms from Neighborhoods
MF GO:0008395 steroid hydroxylase activity IEP Predict GO terms from Neighborhoods
CC GO:0009528 plastid inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0009534 chloroplast thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Predict GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009617 response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0009627 systemic acquired resistance IEP Predict GO terms from Neighborhoods
BP GO:0009636 response to toxic substance IEP Predict GO terms from Neighborhoods
BP GO:0009696 salicylic acid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0009706 chloroplast inner membrane IEP Predict GO terms from Neighborhoods
BP GO:0010039 response to iron ion IEP Predict GO terms from Neighborhoods
BP GO:0010041 response to iron(III) ion IEP Predict GO terms from Neighborhoods
BP GO:0010075 regulation of meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010183 pollen tube guidance IEP Predict GO terms from Neighborhoods
BP GO:0010268 brassinosteroid homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0014070 response to organic cyclic compound IEP Predict GO terms from Neighborhoods
MF GO:0015085 calcium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Predict GO terms from Neighborhoods
MF GO:0015662 P-type ion transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0016128 phytosteroid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016131 brassinosteroid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predict GO terms from Neighborhoods
BP GO:0018958 phenol-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019336 phenol-containing compound catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Predict GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Predict GO terms from Neighborhoods
BP GO:0021533 cell differentiation in hindbrain IEP Predict GO terms from Neighborhoods
BP GO:0021692 cerebellar Purkinje cell layer morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0021697 cerebellar cortex formation IEP Predict GO terms from Neighborhoods
BP GO:0021953 central nervous system neuron differentiation IEP Predict GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0030182 neuron differentiation IEP Predict GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Predict GO terms from Neighborhoods
CC GO:0031164 contractile vacuolar membrane IEP Predict GO terms from Neighborhoods
MF GO:0031406 carboxylic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0031418 L-ascorbic acid binding IEP Predict GO terms from Neighborhoods
CC GO:0031976 plastid thylakoid IEP Predict GO terms from Neighborhoods
MF GO:0033759 flavone synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0033760 2'-deoxymugineic-acid 2'-dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0034785 salicylate 5-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Predict GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Predict GO terms from Neighborhoods
BP GO:0042330 taxis IEP Predict GO terms from Neighborhoods
BP GO:0042472 inner ear morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0042490 mechanoreceptor differentiation IEP Predict GO terms from Neighborhoods
BP GO:0042592 homeostatic process IEP Predict GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0042742 defense response to bacterium IEP Predict GO terms from Neighborhoods
CC GO:0042995 cell projection IEP Predict GO terms from Neighborhoods
CC GO:0043025 neuronal cell body IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
MF GO:0043177 organic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Predict GO terms from Neighborhoods
CC GO:0044297 cell body IEP Predict GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Predict GO terms from Neighborhoods
MF GO:0045486 naringenin 3-dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0046244 salicylic acid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0048029 monosaccharide binding IEP Predict GO terms from Neighborhoods
BP GO:0048598 embryonic morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0050525 cutinase activity IEP Predict GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0050918 positive chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0050954 sensory perception of mechanical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051480 regulation of cytosolic calcium ion concentration IEP Predict GO terms from Neighborhoods
BP GO:0051552 flavone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051553 flavone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Predict GO terms from Neighborhoods
BP GO:0055074 calcium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055081 anion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055088 lipid homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060113 inner ear receptor cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0070588 calcium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0072329 monocarboxylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0072507 divalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0090406 pollen tube IEP Predict GO terms from Neighborhoods
CC GO:0097060 synaptic membrane IEP Predict GO terms from Neighborhoods
BP GO:0097237 cellular response to toxic substance IEP Predict GO terms from Neighborhoods
BP GO:0098542 defense response to other organism IEP Predict GO terms from Neighborhoods
CC GO:0098794 postsynapse IEP Predict GO terms from Neighborhoods
CC GO:0120025 plasma membrane bounded cell projection IEP Predict GO terms from Neighborhoods
MF GO:0120091 jasmonic acid hydrolase IEP Predict GO terms from Neighborhoods
MF GO:0140358 P-type transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1900150 regulation of defense response to fungus IEP Predict GO terms from Neighborhoods
BP GO:1900366 negative regulation of defense response to insect IEP Predict GO terms from Neighborhoods
BP GO:1901615 organic hydroxy compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901616 organic hydroxy compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Predict GO terms from Neighborhoods
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2000068 regulation of defense response to insect IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004883 LOB 7 104
No external refs found!