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  5. SOLTUB.AGRIA.G00000020717

SOLTUB.AGRIA.G00000020717


Description : NEP-interacting protein, putative (DUF239)


Gene families : OG_02_0000036 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000020717
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_75

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000029287 No alias NEP-interacting protein, putative (DUF239) 0.08 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000029287 No alias NEP-interacting protein, putative (DUF239) 0.08 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000029287 No alias NEP-interacting protein, putative (DUF239) 0.08 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002215 defense response to nematode IEP Predict GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Predict GO terms from Neighborhoods
BP GO:0009856 pollination IEP Predict GO terms from Neighborhoods
MF GO:0019863 IgE binding IEP Predict GO terms from Neighborhoods
MF GO:0019865 immunoglobulin binding IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
CC GO:0031225 anchored component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031226 intrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0043667 pollen wall IEP Predict GO terms from Neighborhoods
BP GO:0045730 respiratory burst IEP Predict GO terms from Neighborhoods
CC GO:0046658 anchored component of plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0046910 pectinesterase inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0047911 galacturan 1,4-alpha-galacturonidase activity IEP Predict GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Predict GO terms from Neighborhoods
BP GO:0048868 pollen tube development IEP Predict GO terms from Neighborhoods
BP GO:0060320 rejection of self pollen IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004314 Neprosin 62 226
No external refs found!