Description : RNA-binding protein
Gene families : OG_02_0015137 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000020996 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_58 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | AHRD |
| MF | GO:0003723 | RNA binding | IEA | AHRD |
| MF | GO:0003729 | mRNA binding | IEA | AHRD |
| CC | GO:0005634 | nucleus | IEA | AHRD |
| CC | GO:0016607 | nuclear speck | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000036 | acyl carrier activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000322 | storage vacuole | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000323 | lytic vacuole | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000325 | plant-type vacuole | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000326 | protein storage vacuole | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003008 | system process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003014 | renal system process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004175 | endopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004321 | fatty-acyl-CoA synthase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005615 | extracellular space | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005764 | lysosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005768 | endosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005770 | late endosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005775 | vacuolar lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006508 | proteolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006624 | vacuolar protein processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006743 | ubiquinone metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006744 | ubiquinone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006833 | water transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006885 | regulation of pH | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006950 | response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006996 | organelle organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007033 | vacuole organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007035 | vacuolar acidification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007610 | behavior | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007611 | learning or memory | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007612 | learning | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007613 | memory | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008219 | cell death | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008233 | peptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008306 | associative learning | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008553 | P-type proton-exporting transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009268 | response to pH | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009505 | plant-type cell wall | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009607 | response to biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009611 | response to wounding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009694 | jasmonic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009695 | jasmonic acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009698 | phenylpropanoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009699 | phenylpropanoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009723 | response to ethylene | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009725 | response to hormone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009736 | cytokinin-activated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009751 | response to salicylic acid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009753 | response to jasmonic acid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010023 | proanthocyanidin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010033 | response to organic substance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010148 | transpiration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010150 | leaf senescence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010184 | cytokinin transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010214 | seed coat development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010222 | stem vascular tissue pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010345 | suberin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010447 | response to acidic pH | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010588 | cotyledon vascular tissue pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0012501 | programmed cell death | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0014070 | response to organic cyclic compound | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015562 | efflux transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015662 | P-type ion transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016207 | 4-coumarate-CoA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016405 | CoA-ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016408 | C-acyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016485 | protein processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016878 | acid-thiol ligase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0018995 | host cellular component | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019829 | ATPase-coupled cation transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030004 | cellular monovalent inorganic cation homeostasis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030312 | external encapsulating structure | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030335 | positive regulation of cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030641 | regulation of cellular pH | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031012 | extracellular matrix | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031177 | phosphopantetheine binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032801 | receptor catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0033643 | host cell part | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0033644 | host cell membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033993 | response to lipid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036377 | arbuscular mycorrhizal association | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040014 | regulation of multicellular organism growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040015 | negative regulation of multicellular organism growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040017 | positive regulation of locomotion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042044 | fluid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042180 | cellular ketone metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042181 | ketone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042221 | response to chemical | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042335 | cuticle development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043112 | receptor metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043207 | response to external biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044403 | biological process involved in symbiotic interaction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0044620 | ACP phosphopantetheine attachment site binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0045177 | apical part of cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046189 | phenol-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048167 | regulation of synaptic plasticity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0048225 | suberin network | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0048226 | Casparian strip | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048640 | negative regulation of developmental growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050801 | ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050804 | modulation of chemical synaptic transmission | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050806 | positive regulation of synaptic transmission | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050877 | nervous system process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050890 | cognition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050896 | response to stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050920 | regulation of chemotaxis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050921 | positive regulation of chemotaxis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051192 | prosthetic group binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051239 | regulation of multicellular organismal process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051452 | intracellular pH reduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051453 | regulation of intracellular pH | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051604 | protein maturation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051707 | response to other organism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051851 | modulation by host of symbiont process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055067 | monovalent inorganic cation homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055075 | potassium ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055078 | sodium ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055080 | cation homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060688 | regulation of morphogenesis of a branching structure | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070505 | pollen coat | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070542 | response to fatty acid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070887 | cellular response to chemical stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071472 | cellular response to salt stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0072341 | modified amino acid binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0085042 | periarbuscular membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090693 | plant organ senescence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097061 | dendritic spine organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0099173 | postsynapse organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0099177 | regulation of trans-synaptic signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0106027 | neuron projection organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140104 | molecular carrier activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140115 | export across plasma membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140358 | P-type transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140414 | phosphopantetheine-dependent carrier activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900271 | regulation of long-term synaptic potentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900273 | positive regulation of long-term synaptic potentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901002 | positive regulation of response to salt stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901184 | regulation of ERBB signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901185 | negative regulation of ERBB signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901656 | glycoside transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901661 | quinone metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901663 | quinone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902074 | response to salt | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902600 | proton transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905428 | regulation of plant organ formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990019 | protein storage vacuole organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990069 | stomatal opening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000032 | regulation of secondary shoot formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000147 | positive regulation of cell motility | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |