Coexpression cluster: Cluster_58 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006624 vacuolar protein processing 6.9% (4/58) 7.31 0.0 9e-06
GO:1990019 protein storage vacuole organization 6.9% (4/58) 6.75 0.0 2.3e-05
GO:0010214 seed coat development 12.07% (7/58) 4.07 0.0 5.6e-05
GO:0004197 cysteine-type endopeptidase activity 8.62% (5/58) 4.76 1e-06 0.000202
GO:0000326 protein storage vacuole 6.9% (4/58) 5.72 1e-06 0.00022
GO:0005615 extracellular space 12.07% (7/58) 3.47 3e-06 0.00046
GO:0000322 storage vacuole 6.9% (4/58) 5.0 8e-06 0.000938
GO:0090693 plant organ senescence 13.79% (8/58) 2.89 1.2e-05 0.001251
GO:0000325 plant-type vacuole 8.62% (5/58) 3.94 1.9e-05 0.001617
GO:0008234 cysteine-type peptidase activity 8.62% (5/58) 3.96 1.8e-05 0.001719
GO:0010150 leaf senescence 12.07% (7/58) 2.86 5e-05 0.002508
GO:0044403 biological process involved in symbiotic interaction 13.79% (8/58) 2.61 4.8e-05 0.00253
GO:0050921 positive regulation of chemotaxis 5.17% (3/58) 5.46 4.5e-05 0.002555
GO:0007033 vacuole organization 8.62% (5/58) 3.72 3.9e-05 0.002573
GO:0004175 endopeptidase activity 10.34% (6/58) 3.23 4.3e-05 0.002634
GO:0005764 lysosome 8.62% (5/58) 3.74 3.7e-05 0.002635
GO:0016485 protein processing 6.9% (4/58) 4.45 3.5e-05 0.00269
GO:0007611 learning or memory 6.9% (4/58) 4.12 8.5e-05 0.004043
GO:0000323 lytic vacuole 8.62% (5/58) 3.43 0.000103 0.004629
GO:0050890 cognition 6.9% (4/58) 4.03 0.000109 0.004632
GO:0051851 modulation by host of symbiont process 5.17% (3/58) 4.83 0.000165 0.006692
GO:0004857 enzyme inhibitor activity 8.62% (5/58) 3.15 0.000254 0.009833
GO:0051604 protein maturation 6.9% (4/58) 3.63 0.000315 0.011196
GO:0009723 response to ethylene 10.34% (6/58) 2.71 0.000307 0.01138
GO:0050920 regulation of chemotaxis 5.17% (3/58) 4.38 0.000414 0.014109
GO:0052694 jasmonoyl-isoleucine-12-hydroxylase activity 3.45% (2/58) 6.0 0.000446 0.014623
GO:0030312 external encapsulating structure 17.24% (10/58) 1.8 0.000515 0.016262
GO:0009610 response to symbiotic fungus 6.9% (4/58) 3.36 0.00063 0.019166
GO:0008233 peptidase activity 10.34% (6/58) 2.45 0.000786 0.023085
GO:0005773 vacuole 15.52% (9/58) 1.83 0.000875 0.024053
GO:0085042 periarbuscular membrane 3.45% (2/58) 5.54 0.000856 0.024315
GO:0009753 response to jasmonic acid 10.34% (6/58) 2.39 0.000998 0.026563
GO:0009608 response to symbiont 6.9% (4/58) 3.15 0.001081 0.027897
GO:0009611 response to wounding 13.79% (8/58) 1.92 0.00115 0.028829
GO:0009620 response to fungus 17.24% (10/58) 1.59 0.001532 0.031839
GO:0051707 response to other organism 31.03% (18/58) 1.05 0.001497 0.031878
GO:0051702 biological process involved in interaction with symbiont 8.62% (5/58) 2.59 0.001465 0.03201
GO:0070542 response to fatty acid 10.34% (6/58) 2.28 0.001434 0.032153
GO:0012501 programmed cell death 10.34% (6/58) 2.3 0.001332 0.032423
GO:0005618 cell wall 15.52% (9/58) 1.73 0.001418 0.032645
GO:0018685 alkane 1-monooxygenase activity 3.45% (2/58) 5.19 0.001394 0.032987
GO:0033644 host cell membrane 3.45% (2/58) 4.97 0.001879 0.037231
GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen 3.45% (2/58) 4.97 0.001879 0.037231
GO:0050877 nervous system process 6.9% (4/58) 2.89 0.002112 0.039117
GO:0044419 biological process involved in interspecies interaction between organisms 31.03% (18/58) 1.01 0.002077 0.039321
GO:0009505 plant-type cell wall 10.34% (6/58) 2.18 0.002061 0.039903
GO:0007610 behavior 6.9% (4/58) 2.85 0.002352 0.041743
GO:0009751 response to salicylic acid 10.34% (6/58) 2.14 0.002339 0.042409
GO:0030335 positive regulation of cell migration 5.17% (3/58) 3.45 0.002658 0.046222
GO:0009694 jasmonic acid metabolic process 5.17% (3/58) 3.43 0.002782 0.046471
GO:2000147 positive regulation of cell motility 5.17% (3/58) 3.43 0.00274 0.046693
GO:0008219 cell death 10.34% (6/58) 2.07 0.002997 0.048176
GO:0036377 arbuscular mycorrhizal association 5.17% (3/58) 3.39 0.002995 0.049075
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_76 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_99 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_114 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_128 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_136 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_177 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_190 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_247 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_264 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_266 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_3 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_4 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_8 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_13 0.014 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_17 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_18 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_33 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_38 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_40 0.01 Orthogroups with 8 Potato genotypes Compare
Sequences (58) (download table)

InterPro Domains

GO Terms

Family Terms