SOLTUB.AGRIA.G00000021659


Description : Selenoprotein F


Gene families : OG_02_0009431 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021659
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_81


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000035 acyl binding IEP Predict GO terms from Neighborhoods
MF GO:0000036 acyl carrier activity IEP Predict GO terms from Neighborhoods
CC GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain IEP Predict GO terms from Neighborhoods
BP GO:0000303 response to superoxide IEP Predict GO terms from Neighborhoods
BP GO:0000305 response to oxygen radical IEP Predict GO terms from Neighborhoods
CC GO:0000315 organellar large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0000324 fungal-type vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000418 RNA polymerase IV complex IEP Predict GO terms from Neighborhoods
CC GO:0000419 RNA polymerase V complex IEP Predict GO terms from Neighborhoods
CC GO:0000835 ER ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0000836 Hrd1p ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0000839 Hrd1p ubiquitin ligase ERAD-L complex IEP Predict GO terms from Neighborhoods
MF GO:0001054 RNA polymerase I activity IEP Predict GO terms from Neighborhoods
MF GO:0001055 RNA polymerase II activity IEP Predict GO terms from Neighborhoods
MF GO:0001056 RNA polymerase III activity IEP Predict GO terms from Neighborhoods
BP GO:0001731 formation of translation preinitiation complex IEP Predict GO terms from Neighborhoods
BP GO:0001825 blastocyst formation IEP Predict GO terms from Neighborhoods
BP GO:0001967 suckling behavior IEP Predict GO terms from Neighborhoods
BP GO:0002793 positive regulation of peptide secretion IEP Predict GO terms from Neighborhoods
MF GO:0003756 protein disulfide isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004129 cytochrome-c oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004362 glutathione-disulfide reductase (NADPH) activity IEP Predict GO terms from Neighborhoods
MF GO:0004791 thioredoxin-disulfide reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0005047 signal recognition particle binding IEP Predict GO terms from Neighborhoods
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:0005513 detection of calcium ion IEP Predict GO terms from Neighborhoods
MF GO:0005527 macrolide binding IEP Predict GO terms from Neighborhoods
MF GO:0005528 FK506 binding IEP Predict GO terms from Neighborhoods
CC GO:0005665 RNA polymerase II, core complex IEP Predict GO terms from Neighborhoods
CC GO:0005666 RNA polymerase III complex IEP Predict GO terms from Neighborhoods
CC GO:0005736 RNA polymerase I complex IEP Predict GO terms from Neighborhoods
CC GO:0005743 mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0005747 mitochondrial respiratory chain complex I IEP Predict GO terms from Neighborhoods
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predict GO terms from Neighborhoods
CC GO:0005751 mitochondrial respiratory chain complex IV IEP Predict GO terms from Neighborhoods
CC GO:0005758 mitochondrial intermembrane space IEP Predict GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Predict GO terms from Neighborhoods
CC GO:0005762 mitochondrial large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Predict GO terms from Neighborhoods
CC GO:0005791 rough endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0005793 endoplasmic reticulum-Golgi intermediate compartment IEP Predict GO terms from Neighborhoods
CC GO:0005801 cis-Golgi network IEP Predict GO terms from Neighborhoods
CC GO:0005933 cellular bud IEP Predict GO terms from Neighborhoods
BP GO:0006085 acetyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006086 acetyl-CoA biosynthetic process from pyruvate IEP Predict GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Predict GO terms from Neighborhoods
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predict GO terms from Neighborhoods
BP GO:0006123 mitochondrial electron transport, cytochrome c to oxygen IEP Predict GO terms from Neighborhoods
BP GO:0006360 transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0006383 transcription by RNA polymerase III IEP Predict GO terms from Neighborhoods
BP GO:0006450 regulation of translational fidelity IEP Predict GO terms from Neighborhoods
BP GO:0006486 protein glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006617 SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition IEP Predict GO terms from Neighborhoods
BP GO:0006621 protein retention in ER lumen IEP Predict GO terms from Neighborhoods
BP GO:0006848 pyruvate transport IEP Predict GO terms from Neighborhoods
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0006897 endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0006907 pinocytosis IEP Predict GO terms from Neighborhoods
BP GO:0007549 dosage compensation IEP Predict GO terms from Neighborhoods
BP GO:0007631 feeding behavior IEP Predict GO terms from Neighborhoods
BP GO:0007632 visual behavior IEP Predict GO terms from Neighborhoods
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0008250 oligosaccharyltransferase complex IEP Predict GO terms from Neighborhoods
MF GO:0008312 7S RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0008535 respiratory chain complex IV assembly IEP Predict GO terms from Neighborhoods
BP GO:0008542 visual learning IEP Predict GO terms from Neighborhoods
MF GO:0008794 arsenate reductase (glutaredoxin) activity IEP Predict GO terms from Neighborhoods
BP GO:0009048 dosage compensation by inactivation of X chromosome IEP Predict GO terms from Neighborhoods
BP GO:0009060 aerobic respiration IEP Predict GO terms from Neighborhoods
BP GO:0009106 lipoate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009107 lipoate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009245 lipid A biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009249 protein lipoylation IEP Predict GO terms from Neighborhoods
BP GO:0009304 tRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0010360 negative regulation of anion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0015038 glutathione disulfide oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0015078 proton transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015245 fatty acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Predict GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0016182 synaptic vesicle budding from endosome IEP Predict GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
CC GO:0016282 eukaryotic 43S preinitiation complex IEP Predict GO terms from Neighborhoods
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Predict GO terms from Neighborhoods
BP GO:0017004 cytochrome complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Predict GO terms from Neighborhoods
BP GO:0018196 peptidyl-asparagine modification IEP Predict GO terms from Neighborhoods
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predict GO terms from Neighborhoods
BP GO:0019646 aerobic electron transport chain IEP Predict GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Predict GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Predict GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Predict GO terms from Neighborhoods
BP GO:0022904 respiratory electron transport chain IEP Predict GO terms from Neighborhoods
CC GO:0030061 mitochondrial crista IEP Predict GO terms from Neighborhoods
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predict GO terms from Neighborhoods
CC GO:0030122 AP-2 adaptor complex IEP Predict GO terms from Neighborhoods
CC GO:0030131 clathrin adaptor complex IEP Predict GO terms from Neighborhoods
CC GO:0030134 COPII-coated ER to Golgi transport vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030135 coated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030137 COPI-coated vesicle IEP Predict GO terms from Neighborhoods
MF GO:0030611 arsenate reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0030613 oxidoreductase activity, acting on phosphorus or arsenic in donors IEP Predict GO terms from Neighborhoods
MF GO:0030614 oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor IEP Predict GO terms from Neighborhoods
CC GO:0030964 NADH dehydrogenase complex IEP Predict GO terms from Neighborhoods
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP Predict GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
CC GO:0031300 intrinsic component of organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031301 integral component of organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031304 intrinsic component of mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0031305 integral component of mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Predict GO terms from Neighborhoods
CC GO:0031970 organelle envelope lumen IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
BP GO:0032024 positive regulation of insulin secretion IEP Predict GO terms from Neighborhoods
BP GO:0032880 regulation of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predict GO terms from Neighborhoods
MF GO:0033130 acetylcholine receptor binding IEP Predict GO terms from Neighborhoods
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predict GO terms from Neighborhoods
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predict GO terms from Neighborhoods
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP Predict GO terms from Neighborhoods
BP GO:0034976 response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:0035023 regulation of Rho protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predict GO terms from Neighborhoods
MF GO:0035615 clathrin adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0035774 positive regulation of insulin secretion involved in cellular response to glucose stimulus IEP Predict GO terms from Neighborhoods
CC GO:0036020 endolysosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0042797 tRNA transcription by RNA polymerase III IEP Predict GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Predict GO terms from Neighborhoods
MF GO:0043024 ribosomal small subunit binding IEP Predict GO terms from Neighborhoods
BP GO:0043113 receptor clustering IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0043267 negative regulation of potassium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0043413 macromolecule glycosylation IEP Predict GO terms from Neighborhoods
CC GO:0043614 multi-eIF complex IEP Predict GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Predict GO terms from Neighborhoods
BP GO:0044571 [2Fe-2S] cluster assembly IEP Predict GO terms from Neighborhoods
MF GO:0044620 ACP phosphopantetheine attachment site binding IEP Predict GO terms from Neighborhoods
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predict GO terms from Neighborhoods
CC GO:0045271 respiratory chain complex I IEP Predict GO terms from Neighborhoods
CC GO:0045275 respiratory chain complex III IEP Predict GO terms from Neighborhoods
CC GO:0045277 respiratory chain complex IV IEP Predict GO terms from Neighborhoods
BP GO:0045333 cellular respiration IEP Predict GO terms from Neighborhoods
BP GO:0045444 fat cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0046493 lipid A metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046887 positive regulation of hormone secretion IEP Predict GO terms from Neighborhoods
MF GO:0047134 protein-disulfide reductase (NAD(P)) activity IEP Predict GO terms from Neighborhoods
BP GO:0048268 clathrin coat assembly IEP Predict GO terms from Neighborhoods
CC GO:0048500 signal recognition particle IEP Predict GO terms from Neighborhoods
MF GO:0050833 pyruvate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0050885 neuromuscular process controlling balance IEP Predict GO terms from Neighborhoods
MF GO:0050897 cobalt ion binding IEP Predict GO terms from Neighborhoods
BP GO:0051051 negative regulation of transport IEP Predict GO terms from Neighborhoods
MF GO:0051192 prosthetic group binding IEP Predict GO terms from Neighborhoods
BP GO:0051223 regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051775 response to redox state IEP Predict GO terms from Neighborhoods
BP GO:0060341 regulation of cellular localization IEP Predict GO terms from Neighborhoods
BP GO:0060612 adipose tissue development IEP Predict GO terms from Neighborhoods
BP GO:0061178 regulation of insulin secretion involved in cellular response to glucose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0061448 connective tissue development IEP Predict GO terms from Neighborhoods
BP GO:0061732 mitochondrial acetyl-CoA biosynthetic process from pyruvate IEP Predict GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
CC GO:0070069 cytochrome complex IEP Predict GO terms from Neighborhoods
BP GO:0070085 glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0070142 synaptic vesicle budding IEP Predict GO terms from Neighborhoods
CC GO:0070469 respirasome IEP Predict GO terms from Neighborhoods
BP GO:0070726 cell wall assembly IEP Predict GO terms from Neighborhoods
BP GO:0070861 regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0070862 negative regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0071340 skeletal muscle acetylcholine-gated channel clustering IEP Predict GO terms from Neighborhoods
BP GO:0071450 cellular response to oxygen radical IEP Predict GO terms from Neighborhoods
BP GO:0071451 cellular response to superoxide IEP Predict GO terms from Neighborhoods
BP GO:0071668 plant-type cell wall assembly IEP Predict GO terms from Neighborhoods
CC GO:0071781 endoplasmic reticulum cisternal network IEP Predict GO terms from Neighborhoods
BP GO:0072595 maintenance of protein localization in organelle IEP Predict GO terms from Neighborhoods
CC GO:0085035 haustorium IEP Predict GO terms from Neighborhoods
BP GO:0090277 positive regulation of peptide hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0090317 negative regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0097307 response to farnesol IEP Predict GO terms from Neighborhoods
BP GO:0097308 cellular response to farnesol IEP Predict GO terms from Neighborhoods
MF GO:0097573 glutathione oxidoreductase activity IEP Predict GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098798 mitochondrial protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098803 respiratory chain complex IEP Predict GO terms from Neighborhoods
CC GO:0099128 mitochondrial iron-sulfur cluster assembly complex IEP Predict GO terms from Neighborhoods
BP GO:0099638 endosome to plasma membrane protein transport IEP Predict GO terms from Neighborhoods
MF GO:0140312 cargo adaptor activity IEP Predict GO terms from Neighborhoods
MF GO:0140414 phosphopantetheine-dependent carrier activity IEP Predict GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1901017 negative regulation of potassium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901269 lipooligosaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901380 negative regulation of potassium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1901475 pyruvate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1902001 fatty acid transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Predict GO terms from Neighborhoods
CC GO:1902495 transmembrane transporter complex IEP Predict GO terms from Neighborhoods
BP GO:1903825 organic acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903829 positive regulation of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1904152 regulation of retrograde protein transport, ER to cytosol IEP Predict GO terms from Neighborhoods
BP GO:1904153 negative regulation of retrograde protein transport, ER to cytosol IEP Predict GO terms from Neighborhoods
BP GO:1905039 carboxylic acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1990145 maintenance of translational fidelity IEP Predict GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Predict GO terms from Neighborhoods
CC GO:1990351 transporter complex IEP Predict GO terms from Neighborhoods
MF GO:1990381 ubiquitin-specific protease binding IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036249 Thioredoxin-like_sf 3 67
IPR014912 Sep15_SelM_dom 8 67
No external refs found!