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  5. SOLTUB.AGRIA.G00000021669

SOLTUB.AGRIA.G00000021669


Description : Spermidine synthase


Gene families : OG_02_0000752 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021669
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_52


Type GO Term Name Evidence Source
MF GO:0004766 spermidine synthase activity IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0008295 spermidine biosynthetic process IEA AHRD
BP GO:0009446 putrescine biosynthetic process IEA AHRD
MF GO:0030750 putrescine N-methyltransferase activity IEA AHRD
BP GO:0032259 methylation IEA AHRD
BP GO:0042179 nicotine biosynthetic process IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
BP GO:1990830 cellular response to leukemia inhibitory factor IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0002229 defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:0002239 response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:0002832 negative regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0003032 detection of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004121 cystathionine beta-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0004338 glucan exo-1,3-beta-glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004497 monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004620 phospholipase activity IEP Predict GO terms from Neighborhoods
MF GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006103 2-oxoglutarate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006570 tyrosine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006572 tyrosine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Predict GO terms from Neighborhoods
BP GO:0006952 defense response IEP Predict GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Predict GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0008970 phospholipase A1 activity IEP Predict GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009061 anaerobic respiration IEP Predict GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid family metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009074 aromatic amino acid family catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
CC GO:0009511 plasmodesmatal endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0009615 response to virus IEP Predict GO terms from Neighborhoods
BP GO:0009620 response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009650 UV protection IEP Predict GO terms from Neighborhoods
BP GO:0009698 phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009699 phenylpropanoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009737 response to abscisic acid IEP Predict GO terms from Neighborhoods
BP GO:0009751 response to salicylic acid IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009812 flavonoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009813 flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009821 alkaloid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009900 dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0009901 anther dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0010038 response to metal ion IEP Predict GO terms from Neighborhoods
BP GO:0010041 response to iron(III) ion IEP Predict GO terms from Neighborhoods
BP GO:0010189 vitamin E biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010208 pollen wall assembly IEP Predict GO terms from Neighborhoods
BP GO:0010271 regulation of chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010274 hydrotropism IEP Predict GO terms from Neighborhoods
BP GO:0010345 suberin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010942 positive regulation of cell death IEP Predict GO terms from Neighborhoods
BP GO:0010981 regulation of cell wall macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0014070 response to organic cyclic compound IEP Predict GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016298 lipase activity IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016597 amino acid binding IEP Predict GO terms from Neighborhoods
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predict GO terms from Neighborhoods
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predict GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predict GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016841 ammonia-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016846 carbon-sulfur lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
CC GO:0017119 Golgi transport complex IEP Predict GO terms from Neighborhoods
MF GO:0017172 cysteine dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0018158 protein oxidation IEP Predict GO terms from Neighborhoods
BP GO:0018171 peptidyl-cysteine oxidation IEP Predict GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019748 secondary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Predict GO terms from Neighborhoods
BP GO:0019853 L-ascorbic acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
MF GO:0031404 chloride ion binding IEP Predict GO terms from Neighborhoods
BP GO:0031407 oxylipin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031408 oxylipin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0032102 negative regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032973 amino acid export across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0033075 isoquinoline alkaloid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033076 isoquinoline alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033302 quercetin O-glucoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033329 kaempferol O-glucoside metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0033759 flavone synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0033760 2'-deoxymugineic-acid 2'-dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0033855 nicotianamine aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0033907 beta-D-fucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0034639 L-amino acid efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0034785 salicylate 5-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0036293 response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0036294 cellular response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0042360 vitamin E metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043068 positive regulation of programmed cell death IEP Predict GO terms from Neighborhoods
MF GO:0043177 organic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Predict GO terms from Neighborhoods
CC GO:0043223 cytoplasmic SCF ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0043668 exine IEP Predict GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Predict GO terms from Neighborhoods
BP GO:0044550 secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0045548 phenylalanine ammonia-lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0046274 lignin catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046340 diacylglycerol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046462 monoacylglycerol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046689 response to mercury ion IEP Predict GO terms from Neighborhoods
MF GO:0047372 acylglycerol lipase activity IEP Predict GO terms from Neighborhoods
MF GO:0047654 alliin lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0047701 beta-L-arabinosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0047714 galactolipase activity IEP Predict GO terms from Neighborhoods
CC GO:0048225 suberin network IEP Predict GO terms from Neighborhoods
CC GO:0048226 Casparian strip IEP Predict GO terms from Neighborhoods
BP GO:0048364 root development IEP Predict GO terms from Neighborhoods
BP GO:0048438 floral whorl development IEP Predict GO terms from Neighborhoods
BP GO:0048527 lateral root development IEP Predict GO terms from Neighborhoods
BP GO:0048528 post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:0048578 positive regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
MF GO:0050105 L-gulonolactone oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Predict GO terms from Neighborhoods
BP GO:0051761 sesquiterpene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051762 sesquiterpene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051865 protein autoubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0052577 germacrene-D synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0052582 (+)-menthofuran synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0052651 monoacylglycerol catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0052716 hydroquinone:oxygen oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Predict GO terms from Neighborhoods
BP GO:0070482 response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0070483 detection of hypoxia IEP Predict GO terms from Neighborhoods
MF GO:0070529 L-tryptophan aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070546 L-phenylalanine aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070547 L-tyrosine aminotransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0070645 Ubisch body IEP Predict GO terms from Neighborhoods
BP GO:0071272 morphine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071453 cellular response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0071456 cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080022 primary root development IEP Predict GO terms from Neighborhoods
MF GO:0080083 beta-gentiobiose beta-glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0080133 midchain alkane hydroxylase activity IEP Predict GO terms from Neighborhoods
CC GO:0085042 periarbuscular membrane IEP Predict GO terms from Neighborhoods
BP GO:0090058 metaxylem development IEP Predict GO terms from Neighborhoods
BP GO:0090059 protoxylem development IEP Predict GO terms from Neighborhoods
BP GO:0090398 cellular senescence IEP Predict GO terms from Neighborhoods
BP GO:0090400 stress-induced premature senescence IEP Predict GO terms from Neighborhoods
BP GO:0090693 plant organ senescence IEP Predict GO terms from Neighborhoods
BP GO:0090696 post-embryonic plant organ development IEP Predict GO terms from Neighborhoods
BP GO:0090709 regulation of timing of plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:0097237 cellular response to toxic substance IEP Predict GO terms from Neighborhoods
BP GO:0097295 morphine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0098542 defense response to other organism IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
MF GO:0102627 parthenolide 3beta-hydroxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0102628 costunolide 3beta-hydroxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0102802 thebaine 6-O-demethylase activity IEP Predict GO terms from Neighborhoods
MF GO:0102805 codeine O-demethylase activity IEP Predict GO terms from Neighborhoods
MF GO:0120091 jasmonic acid hydrolase IEP Predict GO terms from Neighborhoods
BP GO:0120255 olefinic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0140115 export across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1900366 negative regulation of defense response to insect IEP Predict GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901376 organic heteropentacyclic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901378 organic heteropentacyclic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901404 regulation of tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901406 positive regulation of tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901606 alpha-amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Predict GO terms from Neighborhoods
BP GO:1901804 beta-glucoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901935 beta-caryophyllene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901937 beta-caryophyllene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902074 response to salt IEP Predict GO terms from Neighborhoods
BP GO:1902182 shoot apical meristem development IEP Predict GO terms from Neighborhoods
BP GO:1903648 positive regulation of chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903825 organic acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904248 regulation of age-related resistance IEP Predict GO terms from Neighborhoods
BP GO:1904250 positive regulation of age-related resistance IEP Predict GO terms from Neighborhoods
BP GO:1905393 plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:1905428 regulation of plant organ formation IEP Predict GO terms from Neighborhoods
MF GO:1990444 F-box domain binding IEP Predict GO terms from Neighborhoods
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2000068 regulation of defense response to insect IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR035246 Spermidine_synt_N 24 80
IPR029063 SAM-dependent_MTases_sf 34 311
IPR001045 Spermi_synthase 25 306
No external refs found!