SOLTUB.AGRIA.G00000022054


Description : Phosphomevalonate kinase


Gene families : OG_02_0015263 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022054
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_251


Type GO Term Name Evidence Source
MF GO:0000993 RNA polymerase II complex binding IEA AHRD
MF GO:0004631 phosphomevalonate kinase activity IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005777 peroxisome IEA AHRD
BP GO:0006357 regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0009742 brassinosteroid mediated signaling pathway IEA AHRD
BP GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway IEA AHRD
BP GO:0010793 regulation of mRNA export from nucleus IEA AHRD
BP GO:0016126 sterol biosynthetic process IEA AHRD
BP GO:0016310 phosphorylation IEA AHRD
BP GO:0016973 poly(A)+ mRNA export from nucleus IEA AHRD
BP GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway IEA AHRD
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEA AHRD
BP GO:0050684 regulation of mRNA processing IEA AHRD
BP GO:0060303 obsolete regulation of nucleosome density IEA AHRD
MF GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding IEA AHRD
BP GO:0070827 obsolete chromatin maintenance IEA AHRD
BP GO:0090239 regulation of histone H4 acetylation IEA AHRD
BP GO:2001253 regulation of histone H3-K36 trimethylation IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predict GO terms from Neighborhoods
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
CC GO:0000781 chromosome, telomeric region IEP Predict GO terms from Neighborhoods
MF GO:0001055 RNA polymerase II activity IEP Predict GO terms from Neighborhoods
MF GO:0001056 RNA polymerase III activity IEP Predict GO terms from Neighborhoods
BP GO:0001819 positive regulation of cytokine production IEP Predict GO terms from Neighborhoods
MF GO:0001882 nucleoside binding IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predict GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Predict GO terms from Neighborhoods
MF GO:0004930 G protein-coupled receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Predict GO terms from Neighborhoods
CC GO:0005665 RNA polymerase II, core complex IEP Predict GO terms from Neighborhoods
CC GO:0005666 RNA polymerase III complex IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0005829 cytosol IEP Predict GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0006366 transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0006383 transcription by RNA polymerase III IEP Predict GO terms from Neighborhoods
BP GO:0006403 RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Predict GO terms from Neighborhoods
BP GO:0006606 protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006607 NLS-bearing protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006610 ribosomal protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0006892 post-Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0006893 Golgi to plasma membrane transport IEP Predict GO terms from Neighborhoods
BP GO:0006896 Golgi to vacuole transport IEP Predict GO terms from Neighborhoods
BP GO:0007015 actin filament organization IEP Predict GO terms from Neighborhoods
BP GO:0007029 endoplasmic reticulum organization IEP Predict GO terms from Neighborhoods
BP GO:0007030 Golgi organization IEP Predict GO terms from Neighborhoods
BP GO:0007041 lysosomal transport IEP Predict GO terms from Neighborhoods
BP GO:0007589 body fluid secretion IEP Predict GO terms from Neighborhoods
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Predict GO terms from Neighborhoods
BP GO:0008298 intracellular mRNA localization IEP Predict GO terms from Neighborhoods
BP GO:0009304 tRNA transcription IEP Predict GO terms from Neighborhoods
CC GO:0009504 cell plate IEP Predict GO terms from Neighborhoods
CC GO:0009527 plastid outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0009561 megagametogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009653 anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
CC GO:0009707 chloroplast outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0009902 chloroplast relocation IEP Predict GO terms from Neighborhoods
BP GO:0009903 chloroplast avoidance movement IEP Predict GO terms from Neighborhoods
BP GO:0009904 chloroplast accumulation movement IEP Predict GO terms from Neighborhoods
BP GO:0009913 epidermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010371 regulation of gibberellin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010372 positive regulation of gibberellin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010977 negative regulation of neuron projection development IEP Predict GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Predict GO terms from Neighborhoods
CC GO:0015630 microtubule cytoskeleton IEP Predict GO terms from Neighborhoods
CC GO:0016020 membrane IEP Predict GO terms from Neighborhoods
BP GO:0016191 synaptic vesicle uncoating IEP Predict GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0016320 endoplasmic reticulum membrane fusion IEP Predict GO terms from Neighborhoods
CC GO:0016442 RISC complex IEP Predict GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0016482 cytosolic transport IEP Predict GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predict GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predict GO terms from Neighborhoods
MF GO:0017022 myosin binding IEP Predict GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0019750 chloroplast localization IEP Predict GO terms from Neighborhoods
BP GO:0022600 digestive system process IEP Predict GO terms from Neighborhoods
BP GO:0030104 water homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Predict GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030126 COPI vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Predict GO terms from Neighborhoods
BP GO:0030157 pancreatic juice secretion IEP Predict GO terms from Neighborhoods
MF GO:0030276 clathrin binding IEP Predict GO terms from Neighborhoods
MF GO:0030332 cyclin binding IEP Predict GO terms from Neighborhoods
CC GO:0030425 dendrite IEP Predict GO terms from Neighborhoods
CC GO:0030426 growth cone IEP Predict GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:0030832 regulation of actin filament length IEP Predict GO terms from Neighborhoods
BP GO:0030833 regulation of actin filament polymerization IEP Predict GO terms from Neighborhoods
BP GO:0030837 negative regulation of actin filament polymerization IEP Predict GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0031047 gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0031048 small non-coding RNA-dependent heterochromatin formation IEP Predict GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031175 neuron projection development IEP Predict GO terms from Neighborhoods
CC GO:0031332 RNAi effector complex IEP Predict GO terms from Neighborhoods
BP GO:0031333 negative regulation of protein-containing complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0031345 negative regulation of cell projection organization IEP Predict GO terms from Neighborhoods
BP GO:0031507 heterochromatin formation IEP Predict GO terms from Neighborhoods
MF GO:0031593 polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0032012 regulation of ARF protein signal transduction IEP Predict GO terms from Neighborhoods
MF GO:0032050 clathrin heavy chain binding IEP Predict GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Predict GO terms from Neighborhoods
BP GO:0032271 regulation of protein polymerization IEP Predict GO terms from Neighborhoods
BP GO:0032272 negative regulation of protein polymerization IEP Predict GO terms from Neighborhoods
BP GO:0032388 positive regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032479 regulation of type I interferon production IEP Predict GO terms from Neighborhoods
BP GO:0032481 positive regulation of type I interferon production IEP Predict GO terms from Neighborhoods
MF GO:0032549 ribonucleoside binding IEP Predict GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
CC GO:0032588 trans-Golgi network membrane IEP Predict GO terms from Neighborhoods
BP GO:0032648 regulation of interferon-beta production IEP Predict GO terms from Neighborhoods
BP GO:0032728 positive regulation of interferon-beta production IEP Predict GO terms from Neighborhoods
BP GO:0032878 regulation of establishment or maintenance of cell polarity IEP Predict GO terms from Neighborhoods
BP GO:0032941 secretion by tissue IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Predict GO terms from Neighborhoods
BP GO:0033334 fin morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Predict GO terms from Neighborhoods
BP GO:0033561 regulation of water loss via skin IEP Predict GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Predict GO terms from Neighborhoods
BP GO:0034067 protein localization to Golgi apparatus IEP Predict GO terms from Neighborhoods
MF GO:0034237 protein kinase A regulatory subunit binding IEP Predict GO terms from Neighborhoods
BP GO:0034260 negative regulation of GTPase activity IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035107 appendage morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035138 pectoral fin morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035196 miRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0035459 vesicle cargo loading IEP Predict GO terms from Neighborhoods
BP GO:0035622 intrahepatic bile duct development IEP Predict GO terms from Neighborhoods
BP GO:0042306 regulation of protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0042307 positive regulation of protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0042797 tRNA transcription by RNA polymerase III IEP Predict GO terms from Neighborhoods
BP GO:0043001 Golgi to plasma membrane protein transport IEP Predict GO terms from Neighborhoods
CC GO:0043005 neuron projection IEP Predict GO terms from Neighborhoods
MF GO:0043024 ribosomal small subunit binding IEP Predict GO terms from Neighborhoods
BP GO:0043087 regulation of GTPase activity IEP Predict GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Predict GO terms from Neighborhoods
MF GO:0043178 alcohol binding IEP Predict GO terms from Neighborhoods
BP GO:0043200 response to amino acid IEP Predict GO terms from Neighborhoods
BP GO:0045036 protein targeting to chloroplast IEP Predict GO terms from Neighborhoods
BP GO:0045037 protein import into chloroplast stroma IEP Predict GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0045806 negative regulation of endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Predict GO terms from Neighborhoods
BP GO:0045828 positive regulation of isoprenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046578 regulation of Ras protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0046824 positive regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Predict GO terms from Neighborhoods
BP GO:0048259 regulation of receptor-mediated endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0048261 negative regulation of receptor-mediated endocytosis IEP Predict GO terms from Neighborhoods
CC GO:0048471 perinuclear region of cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048702 embryonic neurocranium morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048853 forebrain morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048871 multicellular organismal homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0050878 regulation of body fluid levels IEP Predict GO terms from Neighborhoods
BP GO:0050891 multicellular organismal water homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0051018 protein kinase A binding IEP Predict GO terms from Neighborhoods
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
MF GO:0051087 chaperone binding IEP Predict GO terms from Neighborhoods
MF GO:0051117 ATPase binding IEP Predict GO terms from Neighborhoods
BP GO:0051129 negative regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051170 import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0051216 cartilage development IEP Predict GO terms from Neighborhoods
BP GO:0051261 protein depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0051494 negative regulation of cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0051644 plastid localization IEP Predict GO terms from Neighborhoods
BP GO:0051667 establishment of plastid localization IEP Predict GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Predict GO terms from Neighborhoods
BP GO:0051896 regulation of protein kinase B signaling IEP Predict GO terms from Neighborhoods
BP GO:0051897 positive regulation of protein kinase B signaling IEP Predict GO terms from Neighborhoods
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0061009 common bile duct development IEP Predict GO terms from Neighborhoods
BP GO:0061025 membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0061041 regulation of wound healing IEP Predict GO terms from Neighborhoods
BP GO:0061436 establishment of skin barrier IEP Predict GO terms from Neighborhoods
MF GO:0061608 nuclear import signal receptor activity IEP Predict GO terms from Neighborhoods
CC GO:0061927 TOC-TIC supercomplex I IEP Predict GO terms from Neighborhoods
BP GO:0061951 establishment of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0065002 intracellular protein transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0070679 inositol 1,4,5 trisphosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Predict GO terms from Neighborhoods
BP GO:0070828 heterochromatin organization IEP Predict GO terms from Neighborhoods
CC GO:0070971 endoplasmic reticulum exit site IEP Predict GO terms from Neighborhoods
BP GO:0071230 cellular response to amino acid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071483 cellular response to blue light IEP Predict GO terms from Neighborhoods
BP GO:0071806 protein transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0072318 clathrin coat disassembly IEP Predict GO terms from Neighborhoods
BP GO:0072319 vesicle uncoating IEP Predict GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Predict GO terms from Neighborhoods
BP GO:0072596 establishment of protein localization to chloroplast IEP Predict GO terms from Neighborhoods
BP GO:0072598 protein localization to chloroplast IEP Predict GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:0072659 protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0080183 response to photooxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0090110 COPII-coated vesicle cargo loading IEP Predict GO terms from Neighborhoods
BP GO:0090158 endoplasmic reticulum membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0090160 Golgi to lysosome transport IEP Predict GO terms from Neighborhoods
BP GO:0090174 organelle membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0090284 obsolete positive regulation of protein glycosylation in Golgi IEP Predict GO terms from Neighborhoods
BP GO:0090303 positive regulation of wound healing IEP Predict GO terms from Neighborhoods
BP GO:0090316 positive regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
BP GO:0098781 ncRNA transcription IEP Predict GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098984 neuron to neuron synapse IEP Predict GO terms from Neighborhoods
BP GO:0099612 protein localization to axon IEP Predict GO terms from Neighborhoods
BP GO:0110053 regulation of actin filament organization IEP Predict GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Predict GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Predict GO terms from Neighborhoods
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predict GO terms from Neighborhoods
BP GO:1900180 regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1900182 positive regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1900186 negative regulation of clathrin-dependent endocytosis IEP Predict GO terms from Neighborhoods
BP GO:1902463 protein localization to cell leading edge IEP Predict GO terms from Neighborhoods
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Predict GO terms from Neighborhoods
BP GO:1903034 regulation of response to wounding IEP Predict GO terms from Neighborhoods
BP GO:1903036 positive regulation of response to wounding IEP Predict GO terms from Neighborhoods
BP GO:1990778 protein localization to cell periphery IEP Predict GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:2000114 regulation of establishment of cell polarity IEP Predict GO terms from Neighborhoods
BP GO:2000177 regulation of neural precursor cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:2000179 positive regulation of neural precursor cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:2000369 regulation of clathrin-dependent endocytosis IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR017923 TFIIS_N 346 391
IPR020568 Ribosomal_S5_D2-typ_fold 521 765
IPR016005 Erg8 522 997
IPR006204 GHMP_kinase_N_dom 680 756
No external refs found!