SOLTUB.AGRIA.G00000022787

Description : Ap-1 complex subunit mu-2

Gene families : OG_02_0009624 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022787
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_11

Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEA	AHRD
BP	GO:0002090	regulation of receptor internalization	None	Extended
BP	GO:0002092	positive regulation of receptor internalization	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005048	signal sequence binding	IEA	AHRD
MF	GO:0005102	signaling receptor binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005765	lysosomal membrane	IEA	AHRD
CC	GO:0005774	vacuolar membrane	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006605	protein targeting	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006892	post-Golgi vesicle-mediated transport	None	Extended
BP	GO:0006896	Golgi to vacuole transport	IEA	AHRD
BP	GO:0006897	endocytosis	None	Extended
BP	GO:0006898	receptor-mediated endocytosis	None	Extended
BP	GO:0006900	vesicle budding from membrane	IEA	AHRD
BP	GO:0006903	vesicle targeting	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006971	hypotonic response	IEA	AHRD
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007032	endosome organization	IEA	AHRD
BP	GO:0007034	vacuolar transport	None	Extended
BP	GO:0007041	lysosomal transport	IEA	AHRD
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009792	embryo development ending in birth or egg hatching	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010008	endosome membrane	None	Extended
CC	GO:0012506	vesicle membrane	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016050	vesicle organization	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
MF	GO:0019904	protein domain specific binding	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030030	cell projection organization	None	Extended
BP	GO:0030031	cell projection assembly	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030100	regulation of endocytosis	None	Extended
CC	GO:0030119	AP-type membrane coat adaptor complex	None	Extended
CC	GO:0030121	AP-1 adaptor complex	IEA	AHRD
CC	GO:0030122	AP-2 adaptor complex	IEA	AHRD
CC	GO:0030131	clathrin adaptor complex	None	Extended
MF	GO:0030276	clathrin binding	None	Extended
BP	GO:0030587	sorocarp development	IEA	AHRD
CC	GO:0030659	cytoplasmic vesicle membrane	None	Extended
MF	GO:0030674	protein-macromolecule adaptor activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031201	SNARE complex	IEA	AHRD
BP	GO:0031503	protein-containing complex localization	None	Extended
BP	GO:0031623	receptor internalization	None	Extended
CC	GO:0031901	early endosome membrane	IEA	AHRD
BP	GO:0032438	melanosome organization	IEA	AHRD
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
CC	GO:0032588	trans-Golgi network membrane	IEA	AHRD
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0032880	regulation of protein localization	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
MF	GO:0033218	amide binding	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0035459	vesicle cargo loading	None	Extended
MF	GO:0035615	clathrin adaptor activity	IEA	AHRD
BP	GO:0035646	endosome to melanosome transport	IEA	AHRD
BP	GO:0035652	clathrin-coated vesicle cargo loading	None	Extended
BP	GO:0035653	clathrin-coated vesicle cargo loading, AP-1-mediated	IEA	AHRD
BP	GO:0040025	vulval development	IEA	AHRD
MF	GO:0042277	peptide binding	None	Extended
CC	GO:0042995	cell projection	None	Extended
CC	GO:0043005	neuron projection	IEA	AHRD
BP	GO:0043485	endosome to pigment granule transport	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
MF	GO:0044325	transmembrane transporter binding	IEA	AHRD
BP	GO:0044782	cilium organization	None	Extended
BP	GO:0045176	apical protein localization	IEA	AHRD
BP	GO:0045184	establishment of protein localization	None	Extended
CC	GO:0045202	synapse	None	Extended
BP	GO:0045807	positive regulation of endocytosis	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0048259	regulation of receptor-mediated endocytosis	None	Extended
BP	GO:0048260	positive regulation of receptor-mediated endocytosis	None	Extended
BP	GO:0048513	animal organ development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048569	post-embryonic animal organ development	None	Extended
BP	GO:0048753	pigment granule organization	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
MF	GO:0050750	low-density lipoprotein particle receptor binding	IEA	AHRD
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051050	positive regulation of transport	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0051703	biological process involved in intraspecies interaction between organisms	None	Extended
MF	GO:0060090	molecular adaptor activity	None	Extended
BP	GO:0060271	cilium assembly	IEA	AHRD
BP	GO:0060341	regulation of cellular localization	None	Extended
BP	GO:0060627	regulation of vesicle-mediated transport	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0061512	protein localization to cilium	None	Extended
BP	GO:0065003	protein-containing complex assembly	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
MF	GO:0070325	lipoprotein particle receptor binding	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070925	organelle assembly	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072583	clathrin-dependent endocytosis	IEA	AHRD
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0097494	regulation of vesicle size	IEA	AHRD
BP	GO:0097499	protein localization to non-motile cilium	None	Extended
BP	GO:0097500	receptor localization to non-motile cilium	IEA	AHRD
MF	GO:0097718	disordered domain specific binding	IEA	AHRD
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:0098852	lytic vacuole membrane	None	Extended
BP	GO:0098884	postsynaptic neurotransmitter receptor internalization	IEA	AHRD
CC	GO:0098978	glutamatergic synapse	IEA	AHRD
BP	GO:0099003	vesicle-mediated transport in synapse	None	Extended
BP	GO:0099072	regulation of postsynaptic membrane neurotransmitter receptor levels	None	Extended
BP	GO:0099120	socially cooperative development	None	Extended
BP	GO:0099590	neurotransmitter receptor internalization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended
BP	GO:0120031	plasma membrane bounded cell projection assembly	None	Extended
BP	GO:0120036	plasma membrane bounded cell projection organization	None	Extended
BP	GO:0140239	postsynaptic endocytosis	None	Extended
MF	GO:0140312	cargo adaptor activity	None	Extended
BP	GO:1900242	regulation of synaptic vesicle endocytosis	None	Extended
BP	GO:1900244	positive regulation of synaptic vesicle endocytosis	IEA	AHRD
BP	GO:1903076	regulation of protein localization to plasma membrane	None	Extended
BP	GO:1903077	negative regulation of protein localization to plasma membrane	IEA	AHRD
BP	GO:1903421	regulation of synaptic vesicle recycling	None	Extended
BP	GO:1903423	positive regulation of synaptic vesicle recycling	None	Extended
BP	GO:1903441	protein localization to ciliary membrane	None	Extended
BP	GO:1903828	negative regulation of protein localization	None	Extended
BP	GO:1904375	regulation of protein localization to cell periphery	None	Extended
BP	GO:1904376	negative regulation of protein localization to cell periphery	None	Extended
BP	GO:1905475	regulation of protein localization to membrane	None	Extended
BP	GO:1905476	negative regulation of protein localization to membrane	None	Extended
BP	GO:1990778	protein localization to cell periphery	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001101	response to acid chemical	IEP	Predict GO terms from Neighborhoods
MF	GO:0003729	mRNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0004620	phospholipase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004630	phospholipase D activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005794	Golgi apparatus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005911	cell-cell junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0006643	membrane lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006811	ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006812	cation transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006873	cellular ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006885	regulation of pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0007033	vacuole organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007035	vacuolar acidification	IEP	Predict GO terms from Neighborhoods
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008553	P-type proton-exporting transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009395	phospholipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009414	response to water deprivation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009415	response to water	IEP	Predict GO terms from Neighborhoods
CC	GO:0009506	plasmodesma	IEP	Predict GO terms from Neighborhoods
BP	GO:0009651	response to salt stress	IEP	Predict GO terms from Neighborhoods
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009705	plant-type vacuole membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009737	response to abscisic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010035	response to inorganic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0010044	response to aluminum ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010118	stomatal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0010119	regulation of stomatal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0010214	seed coat development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010358	leaf shaping	IEP	Predict GO terms from Neighborhoods
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015662	P-type ion transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016298	lipase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0018958	phenol-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019725	cellular homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0019748	secondary metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019829	ATPase-coupled cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0022626	cytosolic ribosome	IEP	Predict GO terms from Neighborhoods
MF	GO:0022804	active transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030003	cellular cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0030135	coated vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0030136	clathrin-coated vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0030641	regulation of cellular pH	IEP	Predict GO terms from Neighborhoods
CC	GO:0031464	Cul4A-RING E3 ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034220	ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034638	phosphatidylcholine catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0035091	phosphatidylinositol binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043169	cation binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046434	organophosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046466	membrane lipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046470	phosphatidylcholine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046475	glycerophospholipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046503	glycerolipid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046872	metal ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0048532	anatomical structure arrangement	IEP	Predict GO terms from Neighborhoods
BP	GO:0048878	chemical homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050801	ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0051452	intracellular pH reduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0051453	regulation of intracellular pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0055067	monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055080	cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055082	cellular chemical homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0070161	anchoring junction	IEP	Predict GO terms from Neighborhoods
MF	GO:0070290	N-acylphosphatidylethanolamine-specific phospholipase D activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0097305	response to alcohol	IEP	Predict GO terms from Neighborhoods
BP	GO:0098655	cation transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0098771	inorganic ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0120029	proton export across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0140115	export across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0140352	export from cell	IEP	Predict GO terms from Neighborhoods
MF	GO:0140358	P-type transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140657	ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1902600	proton transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1990069	stomatal opening	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036168	AP2_Mu_C_sf	147	408
IPR028565	MHD	147	408
IPR011012	Longin-like_dom_sf	5	129
IPR022775	AP_mu_sigma_su	50	119

External Links

No external refs found!

SOLTUB.AGRIA.G00000022787

Expression Profile

Co-expression Networks

Functional Annotation