SOLTUB.AGRIA.G00000023088

Description : Arogenate dehydratase

Gene families : OG_02_0003029 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023088
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_62

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004664	prephenate dehydratase activity	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006558	L-phenylalanine metabolic process	None	Extended
BP	GO:0006570	tyrosine metabolic process	None	Extended
BP	GO:0006571	tyrosine biosynthetic process	IEA	AHRD
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	IEA	AHRD
BP	GO:0007623	circadian rhythm	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009072	aromatic amino acid family metabolic process	None	Extended
BP	GO:0009073	aromatic amino acid family biosynthetic process	None	Extended
BP	GO:0009094	L-phenylalanine biosynthetic process	IEA	AHRD
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009570	chloroplast stroma	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009645	response to low light intensity stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010244	response to low fluence blue light stimulus by blue low-fluence system	IEA	AHRD
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0047769	arogenate dehydratase activity	IEA	AHRD
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080167	response to karrikin	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	None	Extended
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000082	G1/S transition of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0000117	regulation of transcription involved in G2/M transition of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
MF	GO:0000175	3'-5'-exoribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0000281	mitotic cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0000291	nuclear-transcribed mRNA catabolic process, exonucleolytic	IEP	Predict GO terms from Neighborhoods
CC	GO:0000791	euchromatin	IEP	Predict GO terms from Neighborhoods
CC	GO:0000813	ESCRT I complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000910	cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0001959	regulation of cytokine-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0001960	negative regulation of cytokine-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0002679	respiratory burst involved in defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002696	positive regulation of leukocyte activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002832	negative regulation of response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0004532	exoribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004535	poly(A)-specific ribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004665	prephenate dehydrogenase (NADP+) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005102	signaling receptor binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005700	polytene chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005768	endosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0006277	DNA amplification	IEP	Predict GO terms from Neighborhoods
BP	GO:0007099	centriole replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0007127	meiosis I	IEP	Predict GO terms from Neighborhoods
BP	GO:0007141	male meiosis I	IEP	Predict GO terms from Neighborhoods
BP	GO:0007276	gamete generation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007307	eggshell chorion gene amplification	IEP	Predict GO terms from Neighborhoods
BP	GO:0007605	sensory perception of sound	IEP	Predict GO terms from Neighborhoods
BP	GO:0008284	positive regulation of cell population proliferation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008408	3'-5' exonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008977	prephenate dehydrogenase (NAD+) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010069	zygote asymmetric cytokinesis in embryo sac	IEP	Predict GO terms from Neighborhoods
BP	GO:0010070	zygote asymmetric cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0010528	regulation of transposition	IEP	Predict GO terms from Neighborhoods
BP	GO:0010529	negative regulation of transposition	IEP	Predict GO terms from Neighborhoods
BP	GO:0010929	positive regulation of auxin mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010971	positive regulation of G2/M transition of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
MF	GO:0016896	exoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
BP	GO:0017145	stem cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0022407	regulation of cell-cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0022409	positive regulation of cell-cell adhesion	IEP	Predict GO terms from Neighborhoods
CC	GO:0030015	CCR4-NOT core complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0030098	lymphocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030183	B cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030261	chromosome condensation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031023	microtubule organizing center organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031348	negative regulation of defense response	IEP	Predict GO terms from Neighborhoods
CC	GO:0031523	Myb complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0032102	negative regulation of response to external stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0032420	stereocilium	IEP	Predict GO terms from Neighborhoods
BP	GO:0032786	positive regulation of DNA-templated transcription, elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0032968	positive regulation of transcription elongation by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0033730	arogenate dehydrogenase (NADP+) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0033731	arogenate dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033962	P-body assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0034243	regulation of transcription elongation by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
BP	GO:0034587	piRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035195	miRNA-mediated gene silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0035315	hair cell differentiation	IEP	Predict GO terms from Neighborhoods
CC	GO:0036452	ESCRT complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0042113	B cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042490	mechanoreceptor differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042491	inner ear auditory receptor cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042509	regulation of tyrosine phosphorylation of STAT protein	IEP	Predict GO terms from Neighborhoods
CC	GO:0043186	P granule	IEP	Predict GO terms from Neighborhoods
BP	GO:0043370	regulation of CD4-positive, alpha-beta T cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043372	positive regulation of CD4-positive, alpha-beta T cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043928	exonucleolytic catabolism of deadenylated mRNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0044843	cell cycle G1/S phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:0045069	regulation of viral genome replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0045070	positive regulation of viral genome replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0045580	regulation of T cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045582	positive regulation of T cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045619	regulation of lymphocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045621	positive regulation of lymphocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045622	regulation of T-helper cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045624	positive regulation of T-helper cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045730	respiratory burst	IEP	Predict GO terms from Neighborhoods
BP	GO:0045785	positive regulation of cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0045792	negative regulation of cell size	IEP	Predict GO terms from Neighborhoods
BP	GO:0045944	positive regulation of transcription by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
BP	GO:0046634	regulation of alpha-beta T cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046635	positive regulation of alpha-beta T cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046637	regulation of alpha-beta T cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046638	positive regulation of alpha-beta T cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048524	positive regulation of viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048536	spleen development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048538	thymus development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048563	post-embryonic animal organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048565	digestive tract development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048566	embryonic digestive tract development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048585	negative regulation of response to stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0050730	regulation of peptidyl-tyrosine phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050863	regulation of T cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050870	positive regulation of T cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050954	sensory perception of mechanical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051251	positive regulation of lymphocyte activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051301	cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0051569	regulation of histone H3-K4 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051571	positive regulation of histone H3-K4 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051574	positive regulation of histone H3-K9 methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0051722	protein C-terminal methylesterase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051723	protein methylesterase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0060091	kinocilium	IEP	Predict GO terms from Neighborhoods
BP	GO:0060113	inner ear receptor cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0060118	vestibular receptor cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060119	inner ear receptor cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060122	inner ear receptor cell stereocilium organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0060211	regulation of nuclear-transcribed mRNA poly(A) tail shortening	IEP	Predict GO terms from Neighborhoods
BP	GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	IEP	Predict GO terms from Neighborhoods
BP	GO:0060338	regulation of type I interferon-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0060339	negative regulation of type I interferon-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0060759	regulation of response to cytokine stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0060761	negative regulation of response to cytokine stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0061640	cytoskeleton-dependent cytokinesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0070696	transmembrane receptor protein serine/threonine kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070741	response to interleukin-6	IEP	Predict GO terms from Neighborhoods
BP	GO:0070925	organelle assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0071354	cellular response to interleukin-6	IEP	Predict GO terms from Neighborhoods
MF	GO:0071987	WD40-repeat domain binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0090282	positive regulation of transcription involved in G2/M transition of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	IEP	Predict GO terms from Neighborhoods
CC	GO:0097730	non-motile cilium	IEP	Predict GO terms from Neighborhoods
CC	GO:0097732	9+2 non-motile cilium	IEP	Predict GO terms from Neighborhoods
BP	GO:0098534	centriole assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0098858	actin-based cell projection	IEP	Predict GO terms from Neighborhoods
BP	GO:0110154	RNA decapping	IEP	Predict GO terms from Neighborhoods
BP	GO:0110156	methylguanosine-cap decapping	IEP	Predict GO terms from Neighborhoods
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1900150	regulation of defense response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:1900151	regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	IEP	Predict GO terms from Neighborhoods
BP	GO:1900153	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	IEP	Predict GO terms from Neighborhoods
BP	GO:1901216	positive regulation of neuron death	IEP	Predict GO terms from Neighborhoods
BP	GO:1901347	negative regulation of secondary cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901348	positive regulation of secondary cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901532	regulation of hematopoietic progenitor cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901533	negative regulation of hematopoietic progenitor cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1902105	regulation of leukocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1902107	positive regulation of leukocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1902751	positive regulation of cell cycle G2/M phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1903037	regulation of leukocyte cell-cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:1903039	positive regulation of leukocyte cell-cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:1903339	negative regulation of cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1903340	positive regulation of cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1903708	positive regulation of hemopoiesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1903900	regulation of viral life cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1990511	piRNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1990823	response to leukemia inhibitory factor	IEP	Predict GO terms from Neighborhoods
BP	GO:1990830	cellular response to leukemia inhibitory factor	IEP	Predict GO terms from Neighborhoods
BP	GO:2000514	regulation of CD4-positive, alpha-beta T cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000516	positive regulation of CD4-positive, alpha-beta T cell activation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001086	Preph_deHydtase	140	318

External Links

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SOLTUB.AGRIA.G00000023088

Expression Profile

Co-expression Networks

Functional Annotation