SOLTUB.AGRIA.G00000023423


Description : E3 ubiquitin-protein ligase chip


Gene families : OG_02_0004713 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023423
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_57


Type GO Term Name Evidence Source
BP GO:0000209 protein polyubiquitination IEA AHRD
BP GO:0003341 cilium movement IEA AHRD
MF GO:0004722 protein serine/threonine phosphatase activity IEA AHRD
CC GO:0005635 nuclear envelope IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEA AHRD
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEA AHRD
BP GO:0007399 nervous system development IEA AHRD
MF GO:0008022 protein C-terminus binding IEA AHRD
BP GO:0009266 response to temperature stimulus IEA AHRD
BP GO:0009651 response to salt stress IEA AHRD
BP GO:0009737 response to abscisic acid IEA AHRD
BP GO:0009966 regulation of signal transduction IEA AHRD
BP GO:0010017 red or far-red light signaling pathway IEA AHRD
BP GO:0010019 chloroplast-nucleus signaling pathway IEA AHRD
BP GO:0015031 protein transport IEA AHRD
MF GO:0019899 enzyme binding IEA AHRD
CC GO:0030176 integral component of endoplasmic reticulum membrane IEA AHRD
MF GO:0030544 Hsp70 protein binding IEA AHRD
BP GO:0031398 positive regulation of protein ubiquitination IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
CC GO:0043232 intracellular non-membrane-bounded organelle IEA AHRD
MF GO:0043621 protein self-association IEA AHRD
BP GO:0046686 response to cadmium ion IEA AHRD
MF GO:0046906 tetrapyrrole binding IEA AHRD
BP GO:0046907 intracellular transport IEA AHRD
MF GO:0046983 protein dimerization activity IEA AHRD
MF GO:0051087 chaperone binding IEA AHRD
MF GO:0060090 molecular adaptor activity IEA AHRD
BP GO:0061077 chaperone-mediated protein folding IEA AHRD
MF GO:0061630 ubiquitin protein ligase activity IEA AHRD
BP GO:0065008 regulation of biological quality IEA AHRD
BP GO:0065009 regulation of molecular function IEA AHRD
BP GO:0070286 axonemal dynein complex assembly IEA AHRD
BP GO:0071218 cellular response to misfolded protein IEA AHRD
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEA AHRD
CC GO:0098850 extrinsic component of synaptic vesicle membrane IEA AHRD
CC GO:0120025 plasma membrane bounded cell projection IEA AHRD
CC GO:0140535 intracellular protein-containing complex IEA AHRD
BP GO:1902325 negative regulation of chlorophyll biosynthetic process IEA AHRD
BP GO:1903070 negative regulation of ER-associated ubiquitin-dependent protein catabolic process IEA AHRD
BP GO:1903071 positive regulation of ER-associated ubiquitin-dependent protein catabolic process IEA AHRD
MF GO:1904288 BAT3 complex binding IEA AHRD
CC GO:1990234 transferase complex IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0001708 cell fate specification IEP Predict GO terms from Neighborhoods
MF GO:0003714 transcription corepressor activity IEP Predict GO terms from Neighborhoods
MF GO:0003958 NADPH-hemoprotein reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0004709 MAP kinase kinase kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0006622 protein targeting to lysosome IEP Predict GO terms from Neighborhoods
BP GO:0006623 protein targeting to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0007032 endosome organization IEP Predict GO terms from Neighborhoods
BP GO:0007041 lysosomal transport IEP Predict GO terms from Neighborhoods
BP GO:0007260 tyrosine phosphorylation of STAT protein IEP Predict GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Predict GO terms from Neighborhoods
BP GO:0008333 endosome to lysosome transport IEP Predict GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Predict GO terms from Neighborhoods
BP GO:0009657 plastid organization IEP Predict GO terms from Neighborhoods
BP GO:0009658 chloroplast organization IEP Predict GO terms from Neighborhoods
BP GO:0009790 embryo development IEP Predict GO terms from Neighborhoods
BP GO:0009793 embryo development ending in seed dormancy IEP Predict GO terms from Neighborhoods
BP GO:0009880 embryonic pattern specification IEP Predict GO terms from Neighborhoods
BP GO:0009902 chloroplast relocation IEP Predict GO terms from Neighborhoods
BP GO:0009903 chloroplast avoidance movement IEP Predict GO terms from Neighborhoods
BP GO:0009904 chloroplast accumulation movement IEP Predict GO terms from Neighborhoods
BP GO:0010014 meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0010037 response to carbon dioxide IEP Predict GO terms from Neighborhoods
MF GO:0010181 FMN binding IEP Predict GO terms from Neighborhoods
BP GO:0010212 response to ionizing radiation IEP Predict GO terms from Neighborhoods
BP GO:0010324 membrane invagination IEP Predict GO terms from Neighborhoods
BP GO:0010332 response to gamma radiation IEP Predict GO terms from Neighborhoods
BP GO:0010344 seed oilbody biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010640 regulation of platelet-derived growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010642 negative regulation of platelet-derived growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
BP GO:0016236 macroautophagy IEP Predict GO terms from Neighborhoods
BP GO:0016525 negative regulation of angiogenesis IEP Predict GO terms from Neighborhoods
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Predict GO terms from Neighborhoods
MF GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0017157 regulation of exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0018108 peptidyl-tyrosine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0018212 peptidyl-tyrosine modification IEP Predict GO terms from Neighborhoods
BP GO:0019750 chloroplast localization IEP Predict GO terms from Neighborhoods
CC GO:0030141 secretory granule IEP Predict GO terms from Neighborhoods
BP GO:0030435 sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
BP GO:0030587 sorocarp development IEP Predict GO terms from Neighborhoods
BP GO:0030947 regulation of vascular endothelial growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030948 negative regulation of vascular endothelial growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0031098 stress-activated protein kinase signaling cascade IEP Predict GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Predict GO terms from Neighborhoods
MF GO:0031434 mitogen-activated protein kinase kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0031670 cellular response to nutrient IEP Predict GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Predict GO terms from Neighborhoods
BP GO:0032388 positive regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
BP GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
BP GO:0032571 response to vitamin K IEP Predict GO terms from Neighborhoods
BP GO:0032872 regulation of stress-activated MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0032874 positive regulation of stress-activated MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0033157 regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0033273 response to vitamin IEP Predict GO terms from Neighborhoods
CC GO:0033565 ESCRT-0 complex IEP Predict GO terms from Neighborhoods
BP GO:0036245 cellular response to menadione IEP Predict GO terms from Neighborhoods
BP GO:0036257 multivesicular body organization IEP Predict GO terms from Neighborhoods
BP GO:0036258 multivesicular body assembly IEP Predict GO terms from Neighborhoods
BP GO:0036289 peptidyl-serine autophosphorylation IEP Predict GO terms from Neighborhoods
CC GO:0036452 ESCRT complex IEP Predict GO terms from Neighborhoods
BP GO:0038066 p38MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0042306 regulation of protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0042307 positive regulation of protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0042733 embryonic digit morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Predict GO terms from Neighborhoods
BP GO:0043328 protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
BP GO:0043405 regulation of MAP kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0043523 regulation of neuron apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043525 positive regulation of neuron apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0044770 cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:0044843 cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
CC GO:0045111 intermediate filament cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0045324 late endosome to vacuole transport IEP Predict GO terms from Neighborhoods
BP GO:0045472 response to ether IEP Predict GO terms from Neighborhoods
BP GO:0045765 regulation of angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045921 positive regulation of exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0045995 regulation of embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0046328 regulation of JNK cascade IEP Predict GO terms from Neighborhoods
BP GO:0046330 positive regulation of JNK cascade IEP Predict GO terms from Neighborhoods
BP GO:0046425 regulation of receptor signaling pathway via JAK-STAT IEP Predict GO terms from Neighborhoods
BP GO:0046426 negative regulation of receptor signaling pathway via JAK-STAT IEP Predict GO terms from Neighborhoods
BP GO:0046822 regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0046824 positive regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0051047 positive regulation of secretion IEP Predict GO terms from Neighborhoods
BP GO:0051050 positive regulation of transport IEP Predict GO terms from Neighborhoods
BP GO:0051222 positive regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051403 stress-activated MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0051644 plastid localization IEP Predict GO terms from Neighborhoods
BP GO:0051667 establishment of plastid localization IEP Predict GO terms from Neighborhoods
BP GO:0061462 protein localization to lysosome IEP Predict GO terms from Neighborhoods
BP GO:0070302 regulation of stress-activated protein kinase signaling cascade IEP Predict GO terms from Neighborhoods
BP GO:0070304 positive regulation of stress-activated protein kinase signaling cascade IEP Predict GO terms from Neighborhoods
MF GO:0070402 NADPH binding IEP Predict GO terms from Neighborhoods
BP GO:0071244 cellular response to carbon dioxide IEP Predict GO terms from Neighborhoods
BP GO:0071295 cellular response to vitamin IEP Predict GO terms from Neighborhoods
BP GO:0071307 cellular response to vitamin K IEP Predict GO terms from Neighborhoods
BP GO:0071479 cellular response to ionizing radiation IEP Predict GO terms from Neighborhoods
BP GO:0071480 cellular response to gamma radiation IEP Predict GO terms from Neighborhoods
CC GO:0071682 endocytic vesicle lumen IEP Predict GO terms from Neighborhoods
MF GO:0071949 FAD binding IEP Predict GO terms from Neighborhoods
BP GO:0071985 multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
BP GO:0072666 establishment of protein localization to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0090287 regulation of cellular response to growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0090288 negative regulation of cellular response to growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0090316 positive regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0090421 embryonic meristem initiation IEP Predict GO terms from Neighborhoods
CC GO:0097013 phagocytic vesicle lumen IEP Predict GO terms from Neighborhoods
MF GO:0140030 modification-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140035 ubiquitination-like modification-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140036 ubiquitin-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:1900180 regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1900182 positive regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1901216 positive regulation of neuron death IEP Predict GO terms from Neighborhoods
BP GO:1901342 regulation of vasculature development IEP Predict GO terms from Neighborhoods
BP GO:1901343 negative regulation of vasculature development IEP Predict GO terms from Neighborhoods
BP GO:1901654 response to ketone IEP Predict GO terms from Neighborhoods
BP GO:1901655 cellular response to ketone IEP Predict GO terms from Neighborhoods
BP GO:1901976 regulation of cell cycle checkpoint IEP Predict GO terms from Neighborhoods
BP GO:1901978 positive regulation of cell cycle checkpoint IEP Predict GO terms from Neighborhoods
BP GO:1903013 response to differentiation-inducing factor 1 IEP Predict GO terms from Neighborhoods
BP GO:1903532 positive regulation of secretion by cell IEP Predict GO terms from Neighborhoods
BP GO:1903541 regulation of exosomal secretion IEP Predict GO terms from Neighborhoods
BP GO:1903543 positive regulation of exosomal secretion IEP Predict GO terms from Neighborhoods
BP GO:1904289 regulation of mitotic DNA damage checkpoint IEP Predict GO terms from Neighborhoods
BP GO:1904291 positive regulation of mitotic DNA damage checkpoint IEP Predict GO terms from Neighborhoods
BP GO:1904892 regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1904893 negative regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1904894 positive regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:2000001 regulation of DNA damage checkpoint IEP Predict GO terms from Neighborhoods
BP GO:2000003 positive regulation of DNA damage checkpoint IEP Predict GO terms from Neighborhoods
BP GO:2000181 negative regulation of blood vessel morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2001022 positive regulation of response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003613 Ubox_domain 200 272
IPR019734 TPR_repeat 20 42
IPR011990 TPR-like_helical_dom_sf 9 111
No external refs found!