SOLTUB.AGRIA.G00000023506

Description : Iron-sulfur cluster carrier protein

Gene families : OG_02_0020216 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023506
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_46

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005759	mitochondrial matrix	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007005	mitochondrion organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010257	NADH dehydrogenase complex assembly	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016226	iron-sulfur cluster assembly	IEA	AHRD
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031163	metallo-sulfur cluster assembly	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032981	mitochondrial respiratory chain complex I assembly	IEA	AHRD
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0032990	cell part morphogenesis	None	Extended
BP	GO:0033108	mitochondrial respiratory chain complex assembly	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	IEA	AHRD
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0045892	negative regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
MF	GO:0051536	iron-sulfur cluster binding	None	Extended
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEA	AHRD
MF	GO:0051540	metal cluster binding	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
BP	GO:0070584	mitochondrion morphogenesis	IEA	AHRD
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	IEP	Predict GO terms from Neighborhoods
CC	GO:0000172	ribonuclease MRP complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000408	EKC/KEOPS complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000966	RNA 5'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0001682	tRNA 5'-leader removal	IEP	Predict GO terms from Neighborhoods
BP	GO:0002009	morphogenesis of an epithelium	IEP	Predict GO terms from Neighborhoods
MF	GO:0002039	p53 binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003714	transcription corepressor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004521	endoribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004526	ribonuclease P activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004540	ribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004549	tRNA-specific ribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004712	protein serine/threonine/tyrosine kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006399	tRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006468	protein phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006909	phagocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007391	dorsal closure	IEP	Predict GO terms from Neighborhoods
BP	GO:0008033	tRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0009657	plastid organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009658	chloroplast organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009685	gibberellin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009686	gibberellin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009750	response to fructose	IEP	Predict GO terms from Neighborhoods
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010344	seed oilbody biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016331	morphogenesis of embryonic epithelium	IEP	Predict GO terms from Neighborhoods
CC	GO:0016592	mediator complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
BP	GO:0030036	actin cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0030677	ribonuclease P complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030681	multimeric ribonuclease P complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0033204	ribonuclease P RNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0034470	ncRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0034660	ncRNA metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0035064	methylated histone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0035112	genitalia morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035126	post-embryonic genitalia morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0045995	regulation of embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048563	post-embryonic animal organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048729	tissue morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048805	imaginal disc-derived genitalia morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0070525	tRNA threonylcarbamoyladenosine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071472	cellular response to salt stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0099116	tRNA 5'-end processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0140030	modification-dependent protein binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0140034	methylation-dependent protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1900865	chloroplast RNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:1900871	chloroplast mRNA modification	IEP	Predict GO terms from Neighborhoods
CC	GO:1902555	endoribonuclease complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1905348	endonuclease complex	IEP	Predict GO terms from Neighborhoods
BP	GO:2000035	regulation of stem cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:2000069	regulation of post-embryonic root development	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR033756	YlxH/NBP35	34	277
IPR027417	P-loop_NTPase	37	283

External Links

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SOLTUB.AGRIA.G00000023506

Expression Profile

Co-expression Networks

Functional Annotation