SOLTUB.AGRIA.G00000023510


Description : Polycomb group RING finger protein 1


Gene families : OG_02_0020220 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023510
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_124


Type GO Term Name Evidence Source
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEA AHRD
CC GO:0000792 heterochromatin IEA AHRD
CC GO:0000805 X chromosome IEA AHRD
MF GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA AHRD
BP GO:0001701 in utero embryonic development IEA AHRD
MF GO:0004842 ubiquitin-protein transferase activity IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006306 DNA methylation IEA AHRD
BP GO:0006959 humoral immune response IEA AHRD
BP GO:0007420 brain development IEA AHRD
BP GO:0007568 aging IEA AHRD
MF GO:0008022 protein C-terminus binding IEA AHRD
MF GO:0008270 zinc ion binding IEA AHRD
BP GO:0009414 response to water deprivation IEA AHRD
BP GO:0016573 histone acetylation IEA AHRD
CC GO:0016604 nuclear body IEA AHRD
BP GO:0021903 rostrocaudal neural tube patterning IEA AHRD
BP GO:0030890 positive regulation of B cell proliferation IEA AHRD
BP GO:0033092 positive regulation of immature T cell proliferation in thymus IEA AHRD
CC GO:0035102 PRC1 complex IEA AHRD
BP GO:0036353 histone H2A-K119 monoubiquitination IEA AHRD
BP GO:0045814 negative regulation of gene expression, epigenetic IEA AHRD
BP GO:0048103 somatic stem cell division IEA AHRD
BP GO:0048146 positive regulation of fibroblast proliferation IEA AHRD
BP GO:0048589 developmental growth IEA AHRD
BP GO:0048704 embryonic skeletal system morphogenesis IEA AHRD
BP GO:0051443 positive regulation of ubiquitin-protein transferase activity IEA AHRD
BP GO:0051865 protein autoubiquitination IEA AHRD
BP GO:0060819 inactivation of X chromosome by genomic imprinting IEA AHRD
MF GO:0071535 RING-like zinc finger domain binding IEA AHRD
MF GO:0097027 ubiquitin-protein transferase activator activity IEA AHRD
MF GO:1990841 promoter-specific chromatin binding IEA AHRD
BP GO:2000011 regulation of adaxial/abaxial pattern formation IEA AHRD
BP GO:2001234 negative regulation of apoptotic signaling pathway IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predict GO terms from Neighborhoods
MF GO:0001671 ATPase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0003014 renal system process IEP Predict GO terms from Neighborhoods
MF GO:0005319 lipid transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0006458 'de novo' protein folding IEP Predict GO terms from Neighborhoods
BP GO:0006808 regulation of nitrogen utilization IEP Predict GO terms from Neighborhoods
BP GO:0006833 water transport IEP Predict GO terms from Neighborhoods
BP GO:0006885 regulation of pH IEP Predict GO terms from Neighborhoods
BP GO:0006986 response to unfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0007411 axon guidance IEP Predict GO terms from Neighborhoods
BP GO:0007588 excretion IEP Predict GO terms from Neighborhoods
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0008045 motor neuron axon guidance IEP Predict GO terms from Neighborhoods
MF GO:0008559 ABC-type xenobiotic transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009736 cytokinin-activated signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0009897 external side of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0010025 wax biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010039 response to iron ion IEP Predict GO terms from Neighborhoods
BP GO:0010148 transpiration IEP Predict GO terms from Neighborhoods
BP GO:0010166 wax metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010184 cytokinin transport IEP Predict GO terms from Neighborhoods
BP GO:0010187 negative regulation of seed germination IEP Predict GO terms from Neighborhoods
BP GO:0010222 stem vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010232 vascular transport IEP Predict GO terms from Neighborhoods
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010594 regulation of endothelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010596 negative regulation of endothelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010632 regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010633 negative regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010647 positive regulation of cell communication IEP Predict GO terms from Neighborhoods
BP GO:0014072 response to isoquinoline alkaloid IEP Predict GO terms from Neighborhoods
MF GO:0015143 urate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015225 biotin transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015245 fatty acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015562 efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015718 monocarboxylic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015747 urate transport IEP Predict GO terms from Neighborhoods
BP GO:0015846 polyamine transport IEP Predict GO terms from Neighborhoods
BP GO:0015878 biotin transport IEP Predict GO terms from Neighborhoods
BP GO:0019389 glucuronoside metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019902 phosphatase binding IEP Predict GO terms from Neighborhoods
MF GO:0019903 protein phosphatase binding IEP Predict GO terms from Neighborhoods
BP GO:0021549 cerebellum development IEP Predict GO terms from Neighborhoods
BP GO:0023056 positive regulation of signaling IEP Predict GO terms from Neighborhoods
BP GO:0030097 hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:0030336 negative regulation of cell migration IEP Predict GO terms from Neighborhoods
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP Predict GO terms from Neighborhoods
MF GO:0030544 Hsp70 protein binding IEP Predict GO terms from Neighborhoods
BP GO:0030641 regulation of cellular pH IEP Predict GO terms from Neighborhoods
MF GO:0031072 heat shock protein binding IEP Predict GO terms from Neighborhoods
BP GO:0031152 aggregation involved in sorocarp development IEP Predict GO terms from Neighborhoods
BP GO:0031175 neuron projection development IEP Predict GO terms from Neighborhoods
CC GO:0031253 cell projection membrane IEP Predict GO terms from Neighborhoods
BP GO:0031288 sorocarp morphogenesis IEP Predict GO terms from Neighborhoods
CC GO:0031526 brush border membrane IEP Predict GO terms from Neighborhoods
BP GO:0031960 response to corticosteroid IEP Predict GO terms from Neighborhoods
BP GO:0032006 regulation of TOR signaling IEP Predict GO terms from Neighborhoods
BP GO:0032008 positive regulation of TOR signaling IEP Predict GO terms from Neighborhoods
BP GO:0032104 regulation of response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032107 regulation of response to nutrient levels IEP Predict GO terms from Neighborhoods
MF GO:0032217 riboflavin transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0032218 riboflavin transport IEP Predict GO terms from Neighborhoods
BP GO:0032222 regulation of synaptic transmission, cholinergic IEP Predict GO terms from Neighborhoods
BP GO:0032224 positive regulation of synaptic transmission, cholinergic IEP Predict GO terms from Neighborhoods
BP GO:0032355 response to estradiol IEP Predict GO terms from Neighborhoods
BP GO:0032496 response to lipopolysaccharide IEP Predict GO terms from Neighborhoods
BP GO:0032868 response to insulin IEP Predict GO terms from Neighborhoods
BP GO:0033273 response to vitamin IEP Predict GO terms from Neighborhoods
BP GO:0035162 embryonic hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:0035303 regulation of dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035701 hematopoietic stem cell migration IEP Predict GO terms from Neighborhoods
CC GO:0035838 growing cell tip IEP Predict GO terms from Neighborhoods
BP GO:0035966 response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
BP GO:0035967 cellular response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
BP GO:0036503 ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:0040013 negative regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0042026 protein refolding IEP Predict GO terms from Neighborhoods
BP GO:0042044 fluid transport IEP Predict GO terms from Neighborhoods
BP GO:0042335 cuticle development IEP Predict GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0043278 response to morphine IEP Predict GO terms from Neighborhoods
BP GO:0043279 response to alkaloid IEP Predict GO terms from Neighborhoods
BP GO:0044057 regulation of system process IEP Predict GO terms from Neighborhoods
BP GO:0044058 regulation of digestive system process IEP Predict GO terms from Neighborhoods
CC GO:0044232 organelle membrane contact site IEP Predict GO terms from Neighborhoods
CC GO:0044233 mitochondria-associated endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0045121 membrane raft IEP Predict GO terms from Neighborhoods
BP GO:0046415 urate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046618 xenobiotic export from cell IEP Predict GO terms from Neighborhoods
BP GO:0048388 endosomal lumen acidification IEP Predict GO terms from Neighborhoods
BP GO:0048534 hematopoietic or lymphoid organ development IEP Predict GO terms from Neighborhoods
BP GO:0048545 response to steroid hormone IEP Predict GO terms from Neighborhoods
BP GO:0048568 embryonic organ development IEP Predict GO terms from Neighborhoods
BP GO:0050804 modulation of chemical synaptic transmission IEP Predict GO terms from Neighborhoods
BP GO:0050806 positive regulation of synaptic transmission IEP Predict GO terms from Neighborhoods
BP GO:0051084 'de novo' post-translational protein folding IEP Predict GO terms from Neighborhoods
BP GO:0051085 chaperone cofactor-dependent protein refolding IEP Predict GO terms from Neighborhoods
MF GO:0051087 chaperone binding IEP Predict GO terms from Neighborhoods
BP GO:0051180 vitamin transport IEP Predict GO terms from Neighborhoods
BP GO:0051241 negative regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051384 response to glucocorticoid IEP Predict GO terms from Neighborhoods
BP GO:0051452 intracellular pH reduction IEP Predict GO terms from Neighborhoods
BP GO:0051453 regulation of intracellular pH IEP Predict GO terms from Neighborhoods
BP GO:0051593 response to folic acid IEP Predict GO terms from Neighborhoods
MF GO:0051721 protein phosphatase 2A binding IEP Predict GO terms from Neighborhoods
BP GO:0051788 response to misfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0060136 embryonic process involved in female pregnancy IEP Predict GO terms from Neighborhoods
BP GO:0060215 primitive hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:0060457 negative regulation of digestive system process IEP Predict GO terms from Neighborhoods
BP GO:0061077 chaperone-mediated protein folding IEP Predict GO terms from Neighborhoods
CC GO:0070505 pollen coat IEP Predict GO terms from Neighborhoods
BP GO:0070633 transepithelial transport IEP Predict GO terms from Neighborhoods
BP GO:0071218 cellular response to misfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0071383 cellular response to steroid hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071384 cellular response to corticosteroid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071385 cellular response to glucocorticoid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071392 cellular response to estradiol stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071548 response to dexamethasone IEP Predict GO terms from Neighborhoods
BP GO:0071549 cellular response to dexamethasone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0072348 sulfur compound transport IEP Predict GO terms from Neighborhoods
BP GO:0080051 cutin transport IEP Predict GO terms from Neighborhoods
BP GO:0090083 regulation of inclusion body assembly IEP Predict GO terms from Neighborhoods
BP GO:0090084 negative regulation of inclusion body assembly IEP Predict GO terms from Neighborhoods
CC GO:0090404 pollen tube tip IEP Predict GO terms from Neighborhoods
MF GO:0090482 vitamin transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0097254 renal tubular secretion IEP Predict GO terms from Neighborhoods
BP GO:0097485 neuron projection guidance IEP Predict GO terms from Neighborhoods
BP GO:0097744 renal urate salt excretion IEP Predict GO terms from Neighborhoods
CC GO:0098591 external side of apical plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0098857 membrane microdomain IEP Predict GO terms from Neighborhoods
BP GO:0099177 regulation of trans-synaptic signaling IEP Predict GO terms from Neighborhoods
MF GO:0140359 ABC-type transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Predict GO terms from Neighborhoods
BP GO:0150104 transport across blood-brain barrier IEP Predict GO terms from Neighborhoods
BP GO:1901570 fatty acid derivative biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901654 response to ketone IEP Predict GO terms from Neighborhoods
BP GO:1901655 cellular response to ketone IEP Predict GO terms from Neighborhoods
BP GO:1901656 glycoside transport IEP Predict GO terms from Neighborhoods
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:1901702 salt transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1904478 regulation of intestinal absorption IEP Predict GO terms from Neighborhoods
BP GO:1904479 negative regulation of intestinal absorption IEP Predict GO terms from Neighborhoods
BP GO:1904612 response to 2,3,7,8-tetrachlorodibenzodioxine IEP Predict GO terms from Neighborhoods
BP GO:1905037 autophagosome organization IEP Predict GO terms from Neighborhoods
BP GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1990962 xenobiotic transport across blood-brain barrier IEP Predict GO terms from Neighborhoods
BP GO:2000146 negative regulation of cell motility IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!