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  5. SOLTUB.AGRIA.G00000002557

SOLTUB.AGRIA.G00000002557


Description : DNAse I-like superfamily protein


Gene families : OG_02_0021602 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002557
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_197


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predict GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predict GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predict GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
MF GO:0000400 four-way junction DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0000494 box C/D RNA 3'-end processing IEP Predict GO terms from Neighborhoods
CC GO:0000932 P-body IEP Predict GO terms from Neighborhoods
MF GO:0001217 DNA-binding transcription repressor activity IEP Predict GO terms from Neighborhoods
MF GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific IEP Predict GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0001654 eye development IEP Predict GO terms from Neighborhoods
BP GO:0001818 negative regulation of cytokine production IEP Predict GO terms from Neighborhoods
BP GO:0002200 somatic diversification of immune receptors IEP Predict GO terms from Neighborhoods
BP GO:0002240 response to molecule of oomycetes origin IEP Predict GO terms from Neighborhoods
BP GO:0002562 somatic diversification of immune receptors via germline recombination within a single locus IEP Predict GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Predict GO terms from Neighborhoods
MF GO:0003714 transcription corepressor activity IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predict GO terms from Neighborhoods
CC GO:0005677 chromatin silencing complex IEP Predict GO terms from Neighborhoods
CC GO:0005703 polytene chromosome puff IEP Predict GO terms from Neighborhoods
CC GO:0005704 polytene chromosome band IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005844 polysome IEP Predict GO terms from Neighborhoods
BP GO:0006004 fucose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Predict GO terms from Neighborhoods
BP GO:0006310 DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0006337 nucleosome disassembly IEP Predict GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Predict GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0006359 regulation of transcription by RNA polymerase III IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006401 RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006403 RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0006534 cysteine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006535 cysteine biosynthetic process from serine IEP Predict GO terms from Neighborhoods
BP GO:0006563 L-serine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007286 spermatid development IEP Predict GO terms from Neighborhoods
BP GO:0007530 sex determination IEP Predict GO terms from Neighborhoods
BP GO:0008334 histone mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0008652 cellular amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009890 negative regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009952 anterior/posterior pattern specification IEP Predict GO terms from Neighborhoods
BP GO:0010225 response to UV-C IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010482 regulation of epidermal cell division IEP Predict GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010581 regulation of starch biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016073 snRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016074 sno(s)RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016444 somatic cell DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0016445 somatic diversification of immunoglobulins IEP Predict GO terms from Neighborhoods
BP GO:0016447 somatic recombination of immunoglobulin gene segments IEP Predict GO terms from Neighborhoods
CC GO:0016514 SWI/SNF complex IEP Predict GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Predict GO terms from Neighborhoods
CC GO:0016604 nuclear body IEP Predict GO terms from Neighborhoods
CC GO:0016607 nuclear speck IEP Predict GO terms from Neighborhoods
MF GO:0017070 U6 snRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019344 cysteine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030183 B cell differentiation IEP Predict GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:0030856 regulation of epithelial cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0030955 potassium ion binding IEP Predict GO terms from Neighborhoods
CC GO:0031011 Ino80 complex IEP Predict GO terms from Neighborhoods
BP GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA IEP Predict GO terms from Neighborhoods
BP GO:0031110 regulation of microtubule polymerization or depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0031112 positive regulation of microtubule polymerization or depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0031113 regulation of microtubule polymerization IEP Predict GO terms from Neighborhoods
BP GO:0031116 positive regulation of microtubule polymerization IEP Predict GO terms from Neighborhoods
BP GO:0031126 sno(s)RNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031128 developmental induction IEP Predict GO terms from Neighborhoods
BP GO:0031129 inductive cell-cell signaling IEP Predict GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031324 negative regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0031420 alkali metal ion binding IEP Predict GO terms from Neighborhoods
BP GO:0031445 regulation of heterochromatin formation IEP Predict GO terms from Neighborhoods
CC GO:0031519 PcG protein complex IEP Predict GO terms from Neighborhoods
CC GO:0031981 nuclear lumen IEP Predict GO terms from Neighborhoods
BP GO:0032106 positive regulation of response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032109 positive regulation of response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0032268 regulation of cellular protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032273 positive regulation of protein polymerization IEP Predict GO terms from Neighborhoods
BP GO:0032479 regulation of type I interferon production IEP Predict GO terms from Neighborhoods
BP GO:0032480 negative regulation of type I interferon production IEP Predict GO terms from Neighborhoods
BP GO:0032648 regulation of interferon-beta production IEP Predict GO terms from Neighborhoods
BP GO:0032688 negative regulation of interferon-beta production IEP Predict GO terms from Neighborhoods
BP GO:0032897 negative regulation of viral transcription IEP Predict GO terms from Neighborhoods
BP GO:0032986 protein-DNA complex disassembly IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0033151 V(D)J recombination IEP Predict GO terms from Neighborhoods
BP GO:0033152 immunoglobulin V(D)J recombination IEP Predict GO terms from Neighborhoods
MF GO:0033759 flavone synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0033967 box C/D RNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0034046 poly(G) binding IEP Predict GO terms from Neighborhoods
BP GO:0034063 stress granule assembly IEP Predict GO terms from Neighborhoods
BP GO:0034097 response to cytokine IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0034785 salicylate 5-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0034963 box C/D RNA processing IEP Predict GO terms from Neighborhoods
CC GO:0035061 interchromatin granule IEP Predict GO terms from Neighborhoods
BP GO:0035067 negative regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035561 regulation of chromatin binding IEP Predict GO terms from Neighborhoods
BP GO:0035562 negative regulation of chromatin binding IEP Predict GO terms from Neighborhoods
CC GO:0035770 ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
BP GO:0036093 germ cell proliferation IEP Predict GO terms from Neighborhoods
CC GO:0036396 RNA N6-methyladenosine methyltransferase complex IEP Predict GO terms from Neighborhoods
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
BP GO:0040031 snRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0042113 B cell activation IEP Predict GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Predict GO terms from Neighborhoods
BP GO:0042814 monopolar cell growth IEP Predict GO terms from Neighborhoods
BP GO:0043144 sno(s)RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Predict GO terms from Neighborhoods
BP GO:0043484 regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0043628 small regulatory ncRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045292 mRNA cis splicing, via spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0045293 mRNA editing complex IEP Predict GO terms from Neighborhoods
BP GO:0045604 regulation of epidermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045682 regulation of epidermis development IEP Predict GO terms from Neighborhoods
BP GO:0045892 negative regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0045893 positive regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046332 SMAD binding IEP Predict GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predict GO terms from Neighborhoods
BP GO:0046782 regulation of viral transcription IEP Predict GO terms from Neighborhoods
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048525 negative regulation of viral process IEP Predict GO terms from Neighborhoods
BP GO:0048530 fruit morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048592 eye morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048593 camera-type eye morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048660 regulation of smooth muscle cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0048661 positive regulation of smooth muscle cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0048749 compound eye development IEP Predict GO terms from Neighborhoods
BP GO:0048813 dendrite morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050684 regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051253 negative regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051254 positive regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052325 cell wall pectin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0060236 regulation of mitotic spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predict GO terms from Neighborhoods
BP GO:0070868 obsolete heterochromatin organization involved in chromatin silencing IEP Predict GO terms from Neighborhoods
BP GO:0071345 cellular response to cytokine stimulus IEP Predict GO terms from Neighborhoods
CC GO:0071564 npBAF complex IEP Predict GO terms from Neighborhoods
CC GO:0071565 nBAF complex IEP Predict GO terms from Neighborhoods
BP GO:0071707 immunoglobulin heavy chain V-D-J recombination IEP Predict GO terms from Neighborhoods
BP GO:0080009 mRNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090169 regulation of spindle assembly IEP Predict GO terms from Neighborhoods
BP GO:0090224 regulation of spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090596 sensory organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0097237 cellular response to toxic substance IEP Predict GO terms from Neighborhoods
CC GO:0097346 INO80-type complex IEP Predict GO terms from Neighborhoods
BP GO:0097396 response to interleukin-17 IEP Predict GO terms from Neighborhoods
BP GO:0097398 cellular response to interleukin-17 IEP Predict GO terms from Neighborhoods
CC GO:0097470 ribbon synapse IEP Predict GO terms from Neighborhoods
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predict GO terms from Neighborhoods
CC GO:0099080 supramolecular complex IEP Predict GO terms from Neighborhoods
MF GO:0102802 thebaine 6-O-demethylase activity IEP Predict GO terms from Neighborhoods
MF GO:0102805 codeine O-demethylase activity IEP Predict GO terms from Neighborhoods
BP GO:0106349 snRNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0110012 protein localization to P-body IEP Predict GO terms from Neighborhoods
BP GO:0110154 RNA decapping IEP Predict GO terms from Neighborhoods
BP GO:0110156 methylguanosine-cap decapping IEP Predict GO terms from Neighborhoods
MF GO:0120091 jasmonic acid hydrolase IEP Predict GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Predict GO terms from Neighborhoods
CC GO:0120259 7SK snRNP IEP Predict GO terms from Neighborhoods
BP GO:0120261 regulation of heterochromatin organization IEP Predict GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0140747 regulation of ncRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:1900087 positive regulation of G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1900150 regulation of defense response to fungus IEP Predict GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901673 regulation of mitotic spindle assembly IEP Predict GO terms from Neighborhoods
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902808 positive regulation of cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902893 regulation of miRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:1902894 negative regulation of miRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:1903311 regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1903832 regulation of cellular response to amino acid starvation IEP Predict GO terms from Neighborhoods
BP GO:1903833 positive regulation of cellular response to amino acid starvation IEP Predict GO terms from Neighborhoods
CC GO:1904949 ATPase complex IEP Predict GO terms from Neighborhoods
BP GO:1905380 regulation of snRNA transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:1905382 positive regulation of snRNA transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:1990437 snRNA 2'-O-methylation IEP Predict GO terms from Neighborhoods
BP GO:1990438 U6 2'-O-snRNA methylation IEP Predict GO terms from Neighborhoods
BP GO:2000039 regulation of trichome morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000209 regulation of anoikis IEP Predict GO terms from Neighborhoods
BP GO:2000210 positive regulation of anoikis IEP Predict GO terms from Neighborhoods
BP GO:2000628 regulation of miRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000629 negative regulation of miRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000653 regulation of genetic imprinting IEP Predict GO terms from Neighborhoods
BP GO:2000693 positive regulation of seed maturation IEP Predict GO terms from Neighborhoods
BP GO:2000811 negative regulation of anoikis IEP Predict GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036691 Endo/exonu/phosph_ase_sf 2 176
No external refs found!