SOLTUB.AGRIA.G00000025220

Description : RNA-binding (RRM/RBD/RNP motifs) family protein

Gene families : OG_02_0015773 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000025220
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_63

Type	GO Term	Name	Evidence	Source
BP	GO:0000122	negative regulation of transcription by RNA polymerase II	IEA	AHRD
BP	GO:0001837	epithelial to mesenchymal transition	IEA	AHRD
BP	GO:0001893	maternal placenta development	IEA	AHRD
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003697	single-stranded DNA binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003727	single-stranded RNA binding	None	Extended
MF	GO:0003729	mRNA binding	None	Extended
MF	GO:0003730	mRNA 3'-UTR binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription regulator complex	None	Extended
CC	GO:0005681	spliceosomal complex	IEA	AHRD
CC	GO:0005703	polytene chromosome puff	IEA	AHRD
CC	GO:0005829	cytosol	None	Extended
CC	GO:0005844	polysome	IEA	AHRD
CC	GO:0005849	mRNA cleavage factor complex	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	None	Extended
BP	GO:0006379	mRNA cleavage	None	Extended
BP	GO:0006417	regulation of translation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	IEA	AHRD
BP	GO:0007276	gamete generation	None	Extended
BP	GO:0007283	spermatogenesis	IEA	AHRD
BP	GO:0007319	negative regulation of oskar mRNA translation	IEA	AHRD
BP	GO:0007399	nervous system development	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008187	poly-pyrimidine tract binding	None	Extended
MF	GO:0008266	poly(U) RNA binding	IEA	AHRD
BP	GO:0008283	cell population proliferation	IEA	AHRD
BP	GO:0008406	gonad development	None	Extended
BP	GO:0008584	male gonad development	IEA	AHRD
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010628	positive regulation of gene expression	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0010632	regulation of epithelial cell migration	None	Extended
BP	GO:0010634	positive regulation of epithelial cell migration	None	Extended
BP	GO:0016032	viral process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0017148	negative regulation of translation	None	Extended
BP	GO:0019048	modulation by virus of host process	None	Extended
BP	GO:0019054	modulation by virus of host cellular process	None	Extended
BP	GO:0019087	transformation of host cell by virus	IEA	AHRD
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030324	lung development	IEA	AHRD
BP	GO:0030334	regulation of cell migration	None	Extended
BP	GO:0030335	positive regulation of cell migration	None	Extended
MF	GO:0030371	translation repressor activity	IEA	AHRD
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033120	positive regulation of RNA splicing	None	Extended
MF	GO:0033592	RNA strand annealing activity	IEA	AHRD
MF	GO:0034046	poly(G) binding	IEA	AHRD
BP	GO:0034248	regulation of cellular amide metabolic process	None	Extended
BP	GO:0034249	negative regulation of cellular amide metabolic process	None	Extended
BP	GO:0034250	positive regulation of cellular amide metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035613	RNA stem-loop binding	IEA	AHRD
CC	GO:0035770	ribonucleoprotein granule	None	Extended
BP	GO:0035821	modulation of process of another organism	None	Extended
BP	GO:0035864	response to potassium ion	None	Extended
BP	GO:0035865	cellular response to potassium ion	IEA	AHRD
MF	GO:0036310	ATP-dependent DNA/DNA annealing activity	IEA	AHRD
CC	GO:0036464	cytoplasmic ribonucleoprotein granule	None	Extended
BP	GO:0040012	regulation of locomotion	None	Extended
BP	GO:0040017	positive regulation of locomotion	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042391	regulation of membrane potential	None	Extended
MF	GO:0042802	identical protein binding	IEA	AHRD
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043186	P granule	IEA	AHRD
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043484	regulation of RNA splicing	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	AHRD
BP	GO:0044003	modulation by symbiont of host process	None	Extended
BP	GO:0044068	modulation by symbiont of host cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0045727	positive regulation of translation	IEA	AHRD
BP	GO:0045760	positive regulation of action potential	IEA	AHRD
BP	GO:0045892	negative regulation of DNA-templated transcription	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046011	regulation of oskar mRNA translation	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0047484	regulation of response to osmotic stress	None	Extended
BP	GO:0048024	regulation of mRNA splicing, via spliceosome	None	Extended
BP	GO:0048026	positive regulation of mRNA splicing, via spliceosome	IEA	AHRD
MF	GO:0048027	mRNA 5'-UTR binding	IEA	AHRD
BP	GO:0048232	male gamete generation	None	Extended
BP	GO:0048468	cell development	None	Extended
BP	GO:0048513	animal organ development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048762	mesenchymal cell differentiation	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048864	stem cell development	IEA	AHRD
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050684	regulation of mRNA processing	None	Extended
BP	GO:0050685	positive regulation of mRNA processing	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0051248	negative regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051701	biological process involved in interaction with host	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060135	maternal process involved in female pregnancy	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
MF	GO:0070717	poly-purine tract binding	None	Extended
BP	GO:0070848	response to growth factor	None	Extended
BP	GO:0070849	response to epidermal growth factor	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071216	cellular response to biotic stimulus	None	Extended
BP	GO:0071241	cellular response to inorganic substance	None	Extended
BP	GO:0071248	cellular response to metal ion	None	Extended
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071363	cellular response to growth factor stimulus	None	Extended
BP	GO:0071364	cellular response to epidermal growth factor stimulus	IEA	AHRD
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072396	response to cell cycle checkpoint signaling	None	Extended
BP	GO:0072402	response to DNA integrity checkpoint signaling	None	Extended
BP	GO:0072423	response to DNA damage checkpoint signaling	IEA	AHRD
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	None	Extended
BP	GO:0090501	RNA phosphodiester bond hydrolysis	None	Extended
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098687	chromosomal region	None	Extended
BP	GO:0098787	mRNA cleavage involved in mRNA processing	None	Extended
BP	GO:0098789	pre-mRNA cleavage required for polyadenylation	IEA	AHRD
BP	GO:0098900	regulation of action potential	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0099522	cytosolic region	None	Extended
CC	GO:0099523	presynaptic cytosol	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140666	annealing activity	None	Extended
BP	GO:1901000	regulation of response to salt stress	IEA	AHRD
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903311	regulation of mRNA metabolic process	None	Extended
BP	GO:1903313	positive regulation of mRNA metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903684	regulation of border follicle cell migration	None	Extended
BP	GO:1903688	positive regulation of border follicle cell migration	IEA	AHRD
BP	GO:1904577	obsolete cellular response to tunicamycin	IEA	AHRD
BP	GO:1904579	obsolete cellular response to thapsigargin	IEA	AHRD
MF	GO:1990814	DNA/DNA annealing activity	None	Extended
MF	GO:1990825	sequence-specific mRNA binding	IEA	AHRD
CC	GO:1990826	nucleoplasmic periphery of the nuclear pore complex	IEA	AHRD
CC	GO:1990904	ribonucleoprotein complex	None	Extended
BP	GO:2000070	regulation of response to water deprivation	IEA	AHRD
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000145	regulation of cell motility	None	Extended
BP	GO:2000147	positive regulation of cell motility	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2000243	positive regulation of reproductive process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000077	DNA damage checkpoint signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0000285	1-phosphatidylinositol-3-phosphate 5-kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0000380	alternative mRNA splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0000775	chromosome, centromeric region	IEP	Predict GO terms from Neighborhoods
CC	GO:0000779	condensed chromosome, centromeric region	IEP	Predict GO terms from Neighborhoods
CC	GO:0000781	chromosome, telomeric region	IEP	Predict GO terms from Neighborhoods
BP	GO:0002478	antigen processing and presentation of exogenous peptide antigen	IEP	Predict GO terms from Neighborhoods
BP	GO:0002495	antigen processing and presentation of peptide antigen via MHC class II	IEP	Predict GO terms from Neighborhoods
BP	GO:0002504	antigen processing and presentation of peptide or polysaccharide antigen via MHC class II	IEP	Predict GO terms from Neighborhoods
MF	GO:0003743	translation initiation factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005096	GTPase activator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005654	nucleoplasm	IEP	Predict GO terms from Neighborhoods
CC	GO:0005768	endosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005802	trans-Golgi network	IEP	Predict GO terms from Neighborhoods
CC	GO:0005881	cytoplasmic microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0006446	regulation of translational initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006555	methionine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006612	protein targeting to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006873	cellular ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006885	regulation of pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0006898	receptor-mediated endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006906	vesicle fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	IEP	Predict GO terms from Neighborhoods
BP	GO:0007041	lysosomal transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007044	cell-substrate junction assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0007062	sister chromatid cohesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0007093	mitotic cell cycle checkpoint signaling	IEP	Predict GO terms from Neighborhoods
MF	GO:0008047	enzyme activator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0008333	endosome to lysosome transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0008630	intrinsic apoptotic signaling pathway in response to DNA damage	IEP	Predict GO terms from Neighborhoods
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009268	response to pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0009554	megasporogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009556	microsporogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009759	indole glucosinolate biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0010005	cortical microtubule, transverse to long axis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010031	circumnutation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010090	trichome morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010192	mucilage biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010256	endomembrane system organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010540	basipetal auxin transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010562	positive regulation of phosphorus metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010564	regulation of cell cycle process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010921	regulation of phosphatase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0012506	vesicle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015931	nucleobase-containing compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016192	vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016197	endosomal transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0016281	eukaryotic translation initiation factor 4F complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016308	1-phosphatidylinositol-4-phosphate 5-kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016482	cytosolic transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0016791	phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019065	receptor-mediated endocytosis of virus by host cell	IEP	Predict GO terms from Neighborhoods
MF	GO:0019208	phosphatase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019211	phosphatase activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019725	cellular homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0019882	antigen processing and presentation	IEP	Predict GO terms from Neighborhoods
BP	GO:0019884	antigen processing and presentation of exogenous antigen	IEP	Predict GO terms from Neighborhoods
BP	GO:0019886	antigen processing and presentation of exogenous peptide antigen via MHC class II	IEP	Predict GO terms from Neighborhoods
MF	GO:0019888	protein phosphatase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019900	kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0030003	cellular cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030007	cellular potassium ion homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0030018	Z disc	IEP	Predict GO terms from Neighborhoods
MF	GO:0030234	enzyme regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030330	DNA damage response, signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:0030593	neutrophil chemotaxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030595	leukocyte chemotaxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030641	regulation of cellular pH	IEP	Predict GO terms from Neighborhoods
CC	GO:0030659	cytoplasmic vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0030666	endocytic vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0030670	phagocytic vesicle membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0031267	small GTPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031399	regulation of protein modification process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031401	positive regulation of protein modification process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031410	cytoplasmic vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0031430	M band	IEP	Predict GO terms from Neighborhoods
BP	GO:0031570	DNA integrity checkpoint signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0031571	mitotic G1 DNA damage checkpoint signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0031581	hemidesmosome assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0031901	early endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031902	late endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031982	vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0031984	organelle subcompartment	IEP	Predict GO terms from Neighborhoods
BP	GO:0031998	regulation of fatty acid beta-oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0032000	positive regulation of fatty acid beta-oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0032288	myelin assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0032438	melanosome organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032501	multicellular organismal process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032984	protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0033353	S-adenosylmethionine cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0033673	negative regulation of kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034329	cell junction assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0034330	cell junction organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0034499	late endosome to Golgi transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0034593	phosphatidylinositol bisphosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034595	phosphatidylinositol phosphate 5-phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035303	regulation of dephosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035306	positive regulation of dephosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035307	positive regulation of protein dephosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035556	intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0036289	peptidyl-serine autophosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Predict GO terms from Neighborhoods
BP	GO:0042325	regulation of phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042326	negative regulation of phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042343	indole glucosinolate metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0042470	melanosome	IEP	Predict GO terms from Neighborhoods
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042770	signal transduction in response to DNA damage	IEP	Predict GO terms from Neighborhoods
BP	GO:0042771	intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:0043087	regulation of GTPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043547	positive regulation of GTPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043550	regulation of lipid kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0043813	phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044088	regulation of vacuole organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0044773	mitotic DNA damage checkpoint signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0044774	mitotic DNA integrity checkpoint signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0044819	mitotic G1/S transition checkpoint signaling	IEP	Predict GO terms from Neighborhoods
CC	GO:0045121	membrane raft	IEP	Predict GO terms from Neighborhoods
BP	GO:0045491	xylan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045824	negative regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0045833	negative regulation of lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045923	positive regulation of fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045937	positive regulation of phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046320	regulation of fatty acid oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046321	positive regulation of fatty acid oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046794	transport of virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0046854	phosphatidylinositol phosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047262	polygalacturonate 4-alpha-galacturonosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048002	antigen processing and presentation of peptide antigen	IEP	Predict GO terms from Neighborhoods
BP	GO:0048753	pigment granule organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0048770	pigment granule	IEP	Predict GO terms from Neighborhoods
BP	GO:0050801	ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050879	multicellular organismal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0050900	leukocyte migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0050994	regulation of lipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050996	positive regulation of lipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051028	mRNA transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051177	meiotic sister chromatid cohesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051336	regulation of hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051348	negative regulation of transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051452	intracellular pH reduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0051453	regulation of intracellular pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0051726	regulation of cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0052325	cell wall pectin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052546	cell wall pectin metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0052742	phosphatidylinositol kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052810	1-phosphatidylinositol-5-kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052866	phosphatidylinositol phosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0055028	cortical microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0055067	monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055075	potassium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055080	cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055082	cellular chemical homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060326	cell chemotaxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061025	membrane fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0065009	regulation of molecular function	IEP	Predict GO terms from Neighborhoods
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0071621	granulocyte chemotaxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071702	organic substance transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071705	nitrogen compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0072331	signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:0072332	intrinsic apoptotic signaling pathway by p53 class mediator	IEP	Predict GO terms from Neighborhoods
MF	GO:0072542	protein phosphatase activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0075509	endocytosis involved in viral entry into host cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0080183	response to photooxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0090174	organelle membrane fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090219	negative regulation of lipid kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090332	stomatal closure	IEP	Predict GO terms from Neighborhoods
BP	GO:0090342	obsolete regulation of cell aging	IEP	Predict GO terms from Neighborhoods
BP	GO:0090383	phagosome acidification	IEP	Predict GO terms from Neighborhoods
BP	GO:0090385	phagosome-lysosome fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0097190	apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0097193	intrinsic apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0097352	autophagosome maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0097529	myeloid leukocyte migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0097530	granulocyte migration	IEP	Predict GO terms from Neighborhoods
CC	GO:0097708	intracellular vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0098771	inorganic ion homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0098791	Golgi apparatus subcompartment	IEP	Predict GO terms from Neighborhoods
CC	GO:0098857	membrane microdomain	IEP	Predict GO terms from Neighborhoods
MF	GO:0106018	phosphatidylinositol-3,5-bisphosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0150115	cell-substrate junction organization	IEP	Predict GO terms from Neighborhoods
BP	GO:1900056	negative regulation of leaf senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:1900458	negative regulation of brassinosteroid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1902115	regulation of organelle assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1902806	regulation of cell cycle G1/S phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1902807	negative regulation of cell cycle G1/S phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1903076	regulation of protein localization to plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1903077	negative regulation of protein localization to plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1903100	1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:1903293	phosphatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1903426	regulation of reactive oxygen species biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903828	negative regulation of protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:1904375	regulation of protein localization to cell periphery	IEP	Predict GO terms from Neighborhoods
BP	GO:1904376	negative regulation of protein localization to cell periphery	IEP	Predict GO terms from Neighborhoods
BP	GO:1904562	phosphatidylinositol 5-phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905161	protein localization to phagocytic vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:1905475	regulation of protein localization to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1905476	negative regulation of protein localization to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1990266	neutrophil migration	IEP	Predict GO terms from Neighborhoods
BP	GO:2000031	regulation of salicylic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2000045	regulation of G1/S transition of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:2000134	negative regulation of G1/S transition of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000785	regulation of autophagosome assembly	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	108	165
IPR000504	RRM_dom	8	69
IPR035979	RBD_domain_sf	4	105
IPR035979	RBD_domain_sf	105	193

External Links

No external refs found!

SOLTUB.AGRIA.G00000025220

Expression Profile

Co-expression Networks

Functional Annotation