SOLTUB.AGRIA.G00000026037

Description : Methylthioribulose-1-phosphate dehydratase

Gene families : OG_02_0015919 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026037
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_115

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006555	methionine metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008219	cell death	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009067	aspartate family amino acid biosynthetic process	None	Extended
BP	GO:0009086	methionine biosynthetic process	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009570	chloroplast stroma	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0012501	programmed cell death	IEA	AHRD
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	IEA	AHRD
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
BP	GO:0019509	L-methionine salvage from methylthioadenosine	IEA	AHRD
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0043094	cellular metabolic compound salvage	None	Extended
BP	GO:0043102	amino acid salvage	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0046570	methylthioribulose 1-phosphate dehydratase activity	IEA	AHRD
MF	GO:0046872	metal ion binding	IEA	AHRD
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071265	L-methionine biosynthetic process	None	Extended
BP	GO:0071267	L-methionine salvage	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0000278	mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0000380	alternative mRNA splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0000395	mRNA 5'-splice site recognition	IEP	Predict GO terms from Neighborhoods
CC	GO:0000791	euchromatin	IEP	Predict GO terms from Neighborhoods
BP	GO:0001701	in utero embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0001764	neuron migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0002097	tRNA wobble base modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0002098	tRNA wobble uridine modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0002164	larval development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002165	instar larval or pupal development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002168	instar larval development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002213	defense response to insect	IEP	Predict GO terms from Neighborhoods
BP	GO:0002926	tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0003008	system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0003012	muscle system process	IEP	Predict GO terms from Neighborhoods
MF	GO:0003743	translation initiation factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003746	translation elongation factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003941	L-serine ammonia-lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004402	histone acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004794	L-threonine ammonia-lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006376	mRNA splice site selection	IEP	Predict GO terms from Neighborhoods
BP	GO:0006412	translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006414	translational elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006448	regulation of translational elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006449	regulation of translational termination	IEP	Predict GO terms from Neighborhoods
BP	GO:0006518	peptide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006549	isoleucine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006563	L-serine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006565	L-serine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006566	threonine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006567	threonine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006915	apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006936	muscle contraction	IEP	Predict GO terms from Neighborhoods
BP	GO:0006941	striated muscle contraction	IEP	Predict GO terms from Neighborhoods
BP	GO:0007275	multicellular organism development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007416	synapse assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0007417	central nervous system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007528	neuromuscular junction development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007611	learning or memory	IEP	Predict GO terms from Neighborhoods
BP	GO:0007612	learning	IEP	Predict GO terms from Neighborhoods
BP	GO:0007626	locomotory behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0007635	chemosensory behavior	IEP	Predict GO terms from Neighborhoods
MF	GO:0008047	enzyme activator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008080	N-acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008306	associative learning	IEP	Predict GO terms from Neighborhoods
BP	GO:0008355	olfactory learning	IEP	Predict GO terms from Neighborhoods
MF	GO:0008607	phosphorylase kinase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009068	aspartate family amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009069	serine family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009071	serine family amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009097	isoleucine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009226	nucleotide-sugar biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009292	horizontal gene transfer	IEP	Predict GO terms from Neighborhoods
BP	GO:0009294	DNA-mediated transformation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010468	regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010628	positive regulation of gene expression	IEP	Predict GO terms from Neighborhoods
CC	GO:0016592	mediator complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0016597	amino acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016841	ammonia-lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019207	kinase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019209	kinase activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019221	cytokine-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019222	regulation of metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019887	protein kinase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0023019	signal transduction involved in regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0030097	hemopoiesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030234	enzyme regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030295	protein kinase activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030431	sleep	IEP	Predict GO terms from Neighborhoods
BP	GO:0031399	regulation of protein modification process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032147	activation of protein kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0033588	elongator holoenzyme complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0033674	positive regulation of kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034329	cell junction assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0034330	cell junction organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0035061	interchromatin granule	IEP	Predict GO terms from Neighborhoods
CC	GO:0035145	exon-exon junction complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0035265	organ growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0040025	vulval development	IEP	Predict GO terms from Neighborhoods
BP	GO:0042048	olfactory behavior	IEP	Predict GO terms from Neighborhoods
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043022	ribosome binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043043	peptide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0043279	response to alkaloid	IEP	Predict GO terms from Neighborhoods
BP	GO:0043489	RNA stabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0043603	cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043604	amide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0044547	DNA topoisomerase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0044877	protein-containing complex binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0045860	positive regulation of protein kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045901	positive regulation of translational elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045905	positive regulation of translational termination	IEP	Predict GO terms from Neighborhoods
BP	GO:0048255	mRNA stabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0048518	positive regulation of biological process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048522	positive regulation of cellular process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048534	hematopoietic or lymphoid organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048569	post-embryonic animal organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048599	oocyte development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048789	cytoskeletal matrix organization at active zone	IEP	Predict GO terms from Neighborhoods
MF	GO:0050733	RS domain binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0050790	regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050808	synapse organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0050890	cognition	IEP	Predict GO terms from Neighborhoods
BP	GO:0050920	regulation of chemotaxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0051124	synaptic assembly at neuromuscular junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051246	regulation of protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051262	protein tetramerization	IEP	Predict GO terms from Neighborhoods
MF	GO:0051287	NAD binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051289	protein homotetramerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051391	tRNA acetylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0060048	cardiac muscle contraction	IEP	Predict GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0060429	epithelium development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061053	somite development	IEP	Predict GO terms from Neighborhoods
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0065009	regulation of molecular function	IEP	Predict GO terms from Neighborhoods
MF	GO:0070279	vitamin B6 binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0071013	catalytic step 2 spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0071472	cellular response to salt stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0080027	response to herbivore	IEP	Predict GO terms from Neighborhoods
BP	GO:0080090	regulation of primary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090708	specification of plant organ axis polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0097400	interleukin-17-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0106261	tRNA uridine(34) acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0110012	protein localization to P-body	IEP	Predict GO terms from Neighborhoods
BP	GO:0140467	integrated stress response signaling	IEP	Predict GO terms from Neighborhoods
MF	GO:1901681	sulfur compound binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1902369	negative regulation of RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902373	negative regulation of mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902667	regulation of axon guidance	IEP	Predict GO terms from Neighborhoods
BP	GO:1903312	negative regulation of mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:1904047	S-adenosyl-L-methionine binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1905428	regulation of plant organ formation	IEP	Predict GO terms from Neighborhoods
BP	GO:1990884	RNA acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000025	regulation of leaf formation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000289	regulation of photoreceptor cell axon guidance	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036409	Aldolase_II/adducin_N_sf	248	358

External Links

No external refs found!

SOLTUB.AGRIA.G00000026037

Expression Profile

Co-expression Networks

Functional Annotation