| MF | GO:0000287 | magnesium ion binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000373 | Group II intron splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000427 | plastid-encoded plastid RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000719 | photoreactive repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000959 | mitochondrial RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002103 | endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003727 | single-stranded RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003729 | mRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003904 | deoxyribodipyrimidine photo-lyase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003913 | DNA photolyase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004019 | adenylosuccinate synthase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004124 | cysteine synthase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005576 | extracellular region | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005739 | mitochondrion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006167 | AMP biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006290 | pyrimidine dimer repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006534 | cysteine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006563 | L-serine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006801 | superoxide metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008320 | protein transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008379 | thioredoxin peroxidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009163 | nucleoside biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009295 | nucleoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009503 | thylakoid light-harvesting complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009526 | plastid envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009543 | chloroplast thylakoid lumen | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009662 | etioplast organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009836 | fruit ripening, climacteric | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009881 | photoreceptor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009895 | negative regulation of catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009941 | chloroplast envelope | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009959 | negative gravitropism | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009986 | cell surface | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010019 | chloroplast-nucleus signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010207 | photosystem II assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010319 | stromule | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016209 | antioxidant activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016553 | base conversion or substitution editing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016589 | NURF complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018298 | obsolete protein-chromophore linkage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019430 | removal of superoxide radicals | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019499 | cyanide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030076 | light-harvesting complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030288 | outer membrane-bounded periplasmic space | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030518 | intracellular steroid hormone receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030522 | intracellular receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030656 | regulation of vitamin metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031010 | ISWI-type complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031330 | negative regulation of cellular catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031967 | organelle envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031969 | chloroplast membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031975 | envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031977 | thylakoid lumen | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031978 | plastid thylakoid lumen | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032843 | hydroperoxide reductase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035076 | ecdysone receptor-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035206 | regulation of hemocyte proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042026 | protein refolding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042278 | purine nucleoside metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042391 | regulation of membrane potential | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042451 | purine nucleoside biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042597 | periplasmic space | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042644 | chloroplast nucleoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042646 | plastid nucleoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042766 | obsolete nucleosome mobilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042793 | plastid transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043157 | response to cation stress | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043169 | cation binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043401 | steroid hormone mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043487 | regulation of RNA stability | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043489 | RNA stabilization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043495 | protein-membrane adaptor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044208 | 'de novo' AMP biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045036 | protein targeting to chloroplast | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045037 | protein import into chloroplast stroma | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046033 | AMP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046040 | IMP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046085 | adenosine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046086 | adenosine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046129 | purine ribonucleoside biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046136 | positive regulation of vitamin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046686 | response to cadmium ion | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046872 | metal ion binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048564 | photosystem I assembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050017 | L-3-cyanoalanine synthase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050518 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051881 | regulation of mitochondrial membrane potential | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051920 | peroxiredoxin activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060359 | response to ammonium ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0062197 | cellular response to chemical stress | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070567 | cytidylyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071344 | diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071470 | cellular response to osmotic stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072596 | establishment of protein localization to chloroplast | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072598 | protein localization to chloroplast | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098754 | detoxification | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098807 | chloroplast thylakoid membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098869 | cellular oxidant detoxification | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140824 | thioredoxin-dependent peroxiredoxin activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900864 | mitochondrial RNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900871 | chloroplast mRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901259 | chloroplast rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901403 | positive regulation of tetrapyrrole metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901465 | positive regulation of tetrapyrrole biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902326 | positive regulation of chlorophyll biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902369 | negative regulation of RNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902932 | positive regulation of alcohol biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1904949 | ATPase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904963 | regulation of phytol biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904964 | positive regulation of phytol biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904965 | regulation of vitamin E biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904966 | positive regulation of vitamin E biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990748 | cellular detoxification | IEP | Predict GO terms from Neighborhoods |