SOLTUB.AGRIA.G00000026283


Description : WRKY transcription factor, putative


Gene families : OG_02_0004775 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026283
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_229


Type GO Term Name Evidence Source
MF GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
MF GO:0003824 catalytic activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
MF GO:0008270 zinc ion binding IEA AHRD
BP GO:0009409 response to cold IEA AHRD
BP GO:0009414 response to water deprivation IEA AHRD
BP GO:0009555 pollen development IEA AHRD
BP GO:0009611 response to wounding IEA AHRD
BP GO:0009627 systemic acquired resistance IEA AHRD
BP GO:0009651 response to salt stress IEA AHRD
BP GO:0009723 response to ethylene IEA AHRD
BP GO:0009737 response to abscisic acid IEA AHRD
BP GO:0009739 response to gibberellin IEA AHRD
BP GO:0009832 plant-type cell wall biogenesis IEA AHRD
BP GO:0009846 pollen germination IEA AHRD
BP GO:0009863 salicylic acid mediated signaling pathway IEA AHRD
BP GO:0009867 jasmonic acid mediated signaling pathway IEA AHRD
BP GO:0009957 epidermal cell fate specification IEA AHRD
BP GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid IEA AHRD
BP GO:0009968 negative regulation of signal transduction IEA AHRD
BP GO:0010120 camalexin biosynthetic process IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
BP GO:0010214 seed coat development IEA AHRD
BP GO:0010508 positive regulation of autophagy IEA AHRD
BP GO:0045893 positive regulation of DNA-templated transcription IEA AHRD
BP GO:0070370 cellular heat acclimation IEA AHRD
BP GO:1900150 regulation of defense response to fungus IEA AHRD
BP GO:1900425 negative regulation of defense response to bacterium IEA AHRD
BP GO:1901141 regulation of lignin biosynthetic process IEA AHRD
BP GO:1904369 positive regulation of sclerenchyma cell differentiation IEA AHRD
BP GO:1990170 stress response to cadmium ion IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0000076 DNA replication checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0001172 RNA-templated transcription IEP Predict GO terms from Neighborhoods
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004000 adenosine deaminase activity IEP Predict GO terms from Neighborhoods
CC GO:0005622 intracellular anatomical structure IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005769 early endosome IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0006417 regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007131 reciprocal meiotic recombination IEP Predict GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Predict GO terms from Neighborhoods
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predict GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009615 response to virus IEP Predict GO terms from Neighborhoods
BP GO:0009616 RNAi-mediated antiviral immune response IEP Predict GO terms from Neighborhoods
BP GO:0009751 response to salicylic acid IEP Predict GO terms from Neighborhoods
BP GO:0009890 negative regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010025 wax biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010074 maintenance of meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010166 wax metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010267 ta-siRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0010492 maintenance of shoot apical meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010495 siRNA-mediated long-distance post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010972 negative regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0014070 response to organic cyclic compound IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016441 post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predict GO terms from Neighborhoods
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predict GO terms from Neighborhoods
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predict GO terms from Neighborhoods
BP GO:0017148 negative regulation of translation IEP Predict GO terms from Neighborhoods
MF GO:0019239 deaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0019781 NEDD8 activating enzyme activity IEP Predict GO terms from Neighborhoods
BP GO:0019827 stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0030422 siRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0031047 gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0031379 RNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
CC GO:0031380 nuclear RNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0031570 DNA integrity checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033314 mitotic DNA replication checkpoint signaling IEP Predict GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Predict GO terms from Neighborhoods
BP GO:0034248 regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035194 post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0035825 homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0043487 regulation of RNA stability IEP Predict GO terms from Neighborhoods
BP GO:0043488 regulation of mRNA stability IEP Predict GO terms from Neighborhoods
BP GO:0043523 regulation of neuron apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0044774 mitotic DNA integrity checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0044818 mitotic G2/M transition checkpoint IEP Predict GO terms from Neighborhoods
BP GO:0045116 protein neddylation IEP Predict GO terms from Neighborhoods
CC GO:0045121 membrane raft IEP Predict GO terms from Neighborhoods
BP GO:0045930 negative regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0048438 floral whorl development IEP Predict GO terms from Neighborhoods
BP GO:0048467 gynoecium development IEP Predict GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Predict GO terms from Neighborhoods
BP GO:0048768 root hair cell tip growth IEP Predict GO terms from Neighborhoods
BP GO:0050779 RNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0050832 defense response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0051248 negative regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051607 defense response to virus IEP Predict GO terms from Neighborhoods
MF GO:0052717 tRNA-specific adenosine-34 deaminase activity IEP Predict GO terms from Neighborhoods
BP GO:0060147 regulation of post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0060148 positive regulation of post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0061013 regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061014 positive regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061157 mRNA destabilization IEP Predict GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predict GO terms from Neighborhoods
BP GO:0070918 small regulatory ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090625 siRNA-mediated gene silencing by mRNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0097659 nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Predict GO terms from Neighborhoods
BP GO:0098727 maintenance of cell number IEP Predict GO terms from Neighborhoods
CC GO:0098857 membrane microdomain IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0140527 reciprocal homologous recombination IEP Predict GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0140546 defense response to symbiont IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
BP GO:0140766 siRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
BP GO:1901214 regulation of neuron death IEP Predict GO terms from Neighborhoods
BP GO:1901568 fatty acid derivative metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901570 fatty acid derivative biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901988 negative regulation of cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902347 response to strigolactone IEP Predict GO terms from Neighborhoods
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902750 negative regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1903311 regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903313 positive regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Predict GO terms from Neighborhoods
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036576 WRKY_dom_sf 242 303
IPR003657 WRKY_dom 421 478
IPR003657 WRKY_dom 245 301
IPR036576 WRKY_dom_sf 412 480
No external refs found!