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  5. SOLTUB.AGRIA.G00000026517

SOLTUB.AGRIA.G00000026517


Description : Ycf49-like protein


Gene families : OG_02_0010041 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026517
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_227


Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0000036 acyl carrier activity IEP Predict GO terms from Neighborhoods
MF GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0000302 response to reactive oxygen species IEP Predict GO terms from Neighborhoods
BP GO:0000304 response to singlet oxygen IEP Predict GO terms from Neighborhoods
BP GO:0000373 Group II intron splicing IEP Predict GO terms from Neighborhoods
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predict GO terms from Neighborhoods
BP GO:0000917 division septum assembly IEP Predict GO terms from Neighborhoods
CC GO:0000935 division septum IEP Predict GO terms from Neighborhoods
MF GO:0003727 single-stranded RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004784 superoxide dismutase activity IEP Predict GO terms from Neighborhoods
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
CC GO:0005622 intracellular anatomical structure IEP Predict GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006076 (1->3)-beta-D-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006353 DNA-templated transcription termination IEP Predict GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006782 protoporphyrinogen IX biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
MF GO:0008097 5S rRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Predict GO terms from Neighborhoods
CC GO:0009295 nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0009503 thylakoid light-harvesting complex IEP Predict GO terms from Neighborhoods
CC GO:0009507 chloroplast IEP Predict GO terms from Neighborhoods
CC GO:0009526 plastid envelope IEP Predict GO terms from Neighborhoods
CC GO:0009531 secondary cell wall IEP Predict GO terms from Neighborhoods
CC GO:0009532 plastid stroma IEP Predict GO terms from Neighborhoods
CC GO:0009533 chloroplast stromal thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0009535 chloroplast thylakoid membrane IEP Predict GO terms from Neighborhoods
CC GO:0009536 plastid IEP Predict GO terms from Neighborhoods
CC GO:0009543 chloroplast thylakoid lumen IEP Predict GO terms from Neighborhoods
CC GO:0009570 chloroplast stroma IEP Predict GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Predict GO terms from Neighborhoods
BP GO:0009657 plastid organization IEP Predict GO terms from Neighborhoods
BP GO:0009658 chloroplast organization IEP Predict GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0009790 embryo development IEP Predict GO terms from Neighborhoods
BP GO:0009793 embryo development ending in seed dormancy IEP Predict GO terms from Neighborhoods
BP GO:0009806 lignan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009807 lignan biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009941 chloroplast envelope IEP Predict GO terms from Neighborhoods
BP GO:0010020 chloroplast fission IEP Predict GO terms from Neighborhoods
BP GO:0010193 response to ozone IEP Predict GO terms from Neighborhoods
BP GO:0010206 photosystem II repair IEP Predict GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Predict GO terms from Neighborhoods
CC GO:0010319 stromule IEP Predict GO terms from Neighborhoods
MF GO:0015101 organic cation transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015693 magnesium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0015695 organic cation transport IEP Predict GO terms from Neighborhoods
BP GO:0015805 S-adenosyl-L-methionine transport IEP Predict GO terms from Neighborhoods
BP GO:0015994 chlorophyll metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0015995 chlorophyll biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Predict GO terms from Neighborhoods
MF GO:0016168 chlorophyll binding IEP Predict GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Predict GO terms from Neighborhoods
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predict GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016869 intramolecular transferase activity, transferring amino groups IEP Predict GO terms from Neighborhoods
BP GO:0019430 removal of superoxide radicals IEP Predict GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Predict GO terms from Neighborhoods
MF GO:0019904 protein domain specific binding IEP Predict GO terms from Neighborhoods
CC GO:0030076 light-harvesting complex IEP Predict GO terms from Neighborhoods
BP GO:0030091 protein repair IEP Predict GO terms from Neighborhoods
CC GO:0030288 outer membrane-bounded periplasmic space IEP Predict GO terms from Neighborhoods
CC GO:0030428 cell septum IEP Predict GO terms from Neighborhoods
BP GO:0030656 regulation of vitamin metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0031177 phosphopantetheine binding IEP Predict GO terms from Neighborhoods
CC GO:0031967 organelle envelope IEP Predict GO terms from Neighborhoods
CC GO:0031975 envelope IEP Predict GO terms from Neighborhoods
CC GO:0031978 plastid thylakoid lumen IEP Predict GO terms from Neighborhoods
CC GO:0032153 cell division site IEP Predict GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034063 stress granule assembly IEP Predict GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Predict GO terms from Neighborhoods
BP GO:0042026 protein refolding IEP Predict GO terms from Neighborhoods
CC GO:0042170 plastid membrane IEP Predict GO terms from Neighborhoods
MF GO:0042286 glutamate-1-semialdehyde 2,1-aminomutase activity IEP Predict GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0042597 periplasmic space IEP Predict GO terms from Neighborhoods
CC GO:0042644 chloroplast nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0042646 plastid nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Predict GO terms from Neighborhoods
BP GO:0043093 FtsZ-dependent cytokinesis IEP Predict GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
MF GO:0043495 protein-membrane adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0043572 plastid fission IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0044620 ACP phosphopantetheine attachment site binding IEP Predict GO terms from Neighborhoods
BP GO:0046136 positive regulation of vitamin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046148 pigment biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046501 protoporphyrinogen IX metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046688 response to copper ion IEP Predict GO terms from Neighborhoods
MF GO:0051192 prosthetic group binding IEP Predict GO terms from Neighborhoods
BP GO:0051275 beta-glucan catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0055035 plastid thylakoid membrane IEP Predict GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0071452 cellular response to singlet oxygen IEP Predict GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090529 cell septum assembly IEP Predict GO terms from Neighborhoods
BP GO:0098754 detoxification IEP Predict GO terms from Neighborhoods
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP Predict GO terms from Neighborhoods
BP GO:0098869 cellular oxidant detoxification IEP Predict GO terms from Neighborhoods
MF GO:0102911 (-)-secoisolariciresinol dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Predict GO terms from Neighborhoods
MF GO:0140414 phosphopantetheine-dependent carrier activity IEP Predict GO terms from Neighborhoods
BP GO:1901259 chloroplast rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:1901403 positive regulation of tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901465 positive regulation of tetrapyrrole biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901962 S-adenosyl-L-methionine transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1902326 positive regulation of chlorophyll biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902932 positive regulation of alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1904424 regulation of GTP binding IEP Predict GO terms from Neighborhoods
BP GO:1904426 positive regulation of GTP binding IEP Predict GO terms from Neighborhoods
BP GO:1904963 regulation of phytol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1904964 positive regulation of phytol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1904965 regulation of vitamin E biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1904966 positive regulation of vitamin E biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1905097 regulation of guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
BP GO:1905099 positive regulation of guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
BP GO:1990748 cellular detoxification IEP Predict GO terms from Neighborhoods
BP GO:2000012 regulation of auxin polar transport IEP Predict GO terms from Neighborhoods
BP GO:2001108 positive regulation of Rho guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019634 Uncharacterised_Ycf49 14 101
No external refs found!