SOLTUB.AGRIA.G00000026530

Description : Cornichon family protein

Gene families : OG_02_0001196 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026530
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_191

Type	GO Term	Name	Evidence	Source
BP	GO:0000003	reproduction	None	Extended
BP	GO:0000282	cellular bud site selection	None	Extended
MF	GO:0001664	G protein-coupled receptor binding	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005102	signaling receptor binding	None	Extended
MF	GO:0005126	cytokine receptor binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005789	endoplasmic reticulum membrane	IEA	AHRD
CC	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEA	AHRD
BP	GO:0007114	cell budding	None	Extended
BP	GO:0007120	axial cellular bud site selection	IEA	AHRD
BP	GO:0007163	establishment or maintenance of cell polarity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010469	regulation of signaling receptor activity	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0019954	asexual reproduction	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022413	reproductive process in single-celled organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022898	regulation of transmembrane transporter activity	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0030010	establishment of cell polarity	None	Extended
CC	GO:0030134	COPII-coated ER to Golgi transport vesicle	IEA	AHRD
CC	GO:0030135	coated vesicle	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030435	sporulation resulting in formation of a cellular spore	None	Extended
BP	GO:0030437	ascospore formation	IEA	AHRD
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
MF	GO:0031730	CCR5 chemokine receptor binding	IEA	AHRD
CC	GO:0031982	vesicle	None	Extended
BP	GO:0032409	regulation of transporter activity	None	Extended
BP	GO:0032412	regulation of ion transmembrane transporter activity	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032505	reproduction of a single-celled organism	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0034293	sexual sporulation	None	Extended
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of ion transmembrane transport	None	Extended
MF	GO:0038024	cargo receptor activity	IEA	AHRD
MF	GO:0042379	chemokine receptor binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043269	regulation of ion transport	None	Extended
BP	GO:0043934	sporulation	None	Extended
BP	GO:0043935	sexual sporulation resulting in formation of a cellular spore	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0048020	CCR chemokine receptor binding	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0048468	cell development	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051301	cell division	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
BP	GO:0099601	regulation of neurotransmitter receptor activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1902683	regulation of receptor localization to synapse	None	Extended
BP	GO:1902684	negative regulation of receptor localization to synapse	IEA	AHRD
BP	GO:1903046	meiotic cell cycle process	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended
BP	GO:1904062	regulation of cation transmembrane transport	None	Extended
BP	GO:2000311	regulation of AMPA receptor activity	IEA	AHRD
BP	GO:2001257	regulation of cation channel activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000820	regulation of glutamine family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006508	proteolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006521	regulation of cellular amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006986	response to unfolded protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0007059	chromosome segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007155	cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009501	amyloplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010498	proteasomal protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016567	protein ubiquitination	IEP	Predict GO terms from Neighborhoods
CC	GO:0019005	SCF ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030104	water homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030163	protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030433	ubiquitin-dependent ERAD pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predict GO terms from Neighborhoods
BP	GO:0033238	regulation of cellular amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033239	negative regulation of cellular amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0035966	response to topologically incorrect protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0036503	ERAD pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045763	negative regulation of cellular amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0062014	negative regulation of small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Predict GO terms from Neighborhoods
BP	GO:0080157	regulation of plant-type cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090378	seed trichome elongation	IEP	Predict GO terms from Neighborhoods
MF	GO:0097602	cullin family protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902005	regulation of proline biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902006	negative regulation of proline biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000214	regulation of proline metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000215	negative regulation of proline metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000282	regulation of cellular amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000283	negative regulation of cellular amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003377	Cornichon	14	77

External Links

No external refs found!

SOLTUB.AGRIA.G00000026530

Expression Profile

Co-expression Networks

Functional Annotation