SOLTUB.AGRIA.G00000026633

Description : UPF0051 protein ycf24

Gene families : OG_02_0010055 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026633
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_150

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009570	chloroplast stroma	IEA	AHRD
BP	GO:0009668	plastid membrane organization	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010027	thylakoid membrane organization	IEA	AHRD
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016226	iron-sulfur cluster assembly	IEA	AHRD
MF	GO:0016787	hydrolase activity	IEA	AHRD
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031163	metallo-sulfur cluster assembly	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000719	photoreactive repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0001654	eye development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002026	regulation of the force of heart contraction	IEP	Predict GO terms from Neighborhoods
BP	GO:0003007	heart morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0003904	deoxyribodipyrimidine photo-lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003913	DNA photolyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004175	endopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004177	aminopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004222	metalloendopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004252	serine-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006290	pyrimidine dimer repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006305	DNA alkylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006306	DNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006508	proteolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	IEP	Predict GO terms from Neighborhoods
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006879	cellular iron ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006968	cellular defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0007519	skeletal muscle tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0008016	regulation of heart contraction	IEP	Predict GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008236	serine-type peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008238	exopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009368	endopeptidase Clp complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0009376	HslUV protease complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0009526	plastid envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0009534	chloroplast thylakoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009657	plastid organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009658	chloroplast organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0009840	chloroplastic endopeptidase Clp complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0009881	photoreceptor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0009941	chloroplast envelope	IEP	Predict GO terms from Neighborhoods
BP	GO:0010190	cytochrome b6f complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010611	regulation of cardiac muscle hypertrophy	IEP	Predict GO terms from Neighborhoods
BP	GO:0010614	negative regulation of cardiac muscle hypertrophy	IEP	Predict GO terms from Neighborhoods
BP	GO:0014741	negative regulation of muscle hypertrophy	IEP	Predict GO terms from Neighborhoods
BP	GO:0014743	regulation of muscle hypertrophy	IEP	Predict GO terms from Neighborhoods
MF	GO:0015035	protein-disulfide reductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0017004	cytochrome complex assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0017171	serine hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018298	obsolete protein-chromophore linkage	IEP	Predict GO terms from Neighborhoods
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019538	protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0020027	hemoglobin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0021515	cell differentiation in spinal cord	IEP	Predict GO terms from Neighborhoods
BP	GO:0021517	ventral spinal cord development	IEP	Predict GO terms from Neighborhoods
BP	GO:0021953	central nervous system neuron differentiation	IEP	Predict GO terms from Neighborhoods
CC	GO:0030016	myofibril	IEP	Predict GO terms from Neighborhoods
BP	GO:0030097	hemopoiesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030239	myofibril assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0030902	hindbrain development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031032	actomyosin structure organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0031597	cytosolic proteasome complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031967	organelle envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0031975	envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0031976	plastid thylakoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0031977	thylakoid lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0032088	negative regulation of NF-kappaB transcription factor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0042170	plastid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0042220	response to cocaine	IEP	Predict GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0043010	camera-type eye development	IEP	Predict GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0043292	contractile fiber	IEP	Predict GO terms from Neighborhoods
BP	GO:0043502	regulation of muscle adaptation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043516	regulation of DNA damage response, signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044571	[2Fe-2S] cluster assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048066	developmental pigmentation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048514	blood vessel morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048534	hematopoietic or lymphoid organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048665	neuron fate specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0048880	sensory system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048881	mechanosensory lateral line system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048882	lateral line development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048925	lateral line system development	IEP	Predict GO terms from Neighborhoods
MF	GO:0051117	ATPase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0055035	plastid thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0060537	muscle tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0071369	cellular response to ethylene stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071395	cellular response to jasmonic acid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071398	cellular response to fatty acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0071407	cellular response to organic cyclic compound	IEP	Predict GO terms from Neighborhoods
BP	GO:0071446	cellular response to salicylic acid stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0071949	FAD binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0097428	protein maturation by iron-sulfur cluster transfer	IEP	Predict GO terms from Neighborhoods
MF	GO:0097573	glutathione oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0106034	protein maturation by [2Fe-2S] cluster transfer	IEP	Predict GO terms from Neighborhoods
BP	GO:0106035	protein maturation by [4Fe-4S] cluster transfer	IEP	Predict GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predict GO terms from Neighborhoods
MF	GO:0140657	ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1905368	peptidase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1905369	endopeptidase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1990229	iron-sulfur cluster assembly complex	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000825	SUF_FeS_clus_asmbl_SufBD	89	315
IPR037284	SUF_FeS_clus_asmbl_SufBD_sf	30	341
IPR011542	SUF_FeS_clus_asmbl_SufD	53	331

External Links

No external refs found!

SOLTUB.AGRIA.G00000026633

Expression Profile

Co-expression Networks

Functional Annotation