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  5. SOLTUB.AGRIA.G00000027084

SOLTUB.AGRIA.G00000027084


Description : 2-keto-3-deoxy-L-rhamnonate aldolase


Gene families : OG_02_0020484 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000027084
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_62


Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA AHRD
MF GO:0016151 nickel cation binding IEA AHRD
BP GO:0034214 protein hexamerization IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
MF GO:0106099 2-keto-3-deoxy-L-rhamnonate aldolase activity IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000329 fungal-type vacuole membrane IEP Predict GO terms from Neighborhoods
BP GO:0000959 mitochondrial RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0001403 invasive growth in response to glucose limitation IEP Predict GO terms from Neighborhoods
BP GO:0002181 cytoplasmic translation IEP Predict GO terms from Neighborhoods
BP GO:0003333 amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003861 3-isopropylmalate dehydratase activity IEP Predict GO terms from Neighborhoods
MF GO:0005313 L-glutamate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005385 zinc ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005784 Sec61 translocon complex IEP Predict GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Predict GO terms from Neighborhoods
BP GO:0006012 galactose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006063 uronic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation IEP Predict GO terms from Neighborhoods
BP GO:0006812 cation transport IEP Predict GO terms from Neighborhoods
BP GO:0006824 cobalt ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006828 manganese ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006865 amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0006877 cellular cobalt ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0007035 vacuolar acidification IEP Predict GO terms from Neighborhoods
BP GO:0007042 lysosomal lumen acidification IEP Predict GO terms from Neighborhoods
BP GO:0007124 pseudohyphal growth IEP Predict GO terms from Neighborhoods
MF GO:0008296 3'-5'-exodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009507 chloroplast IEP Predict GO terms from Neighborhoods
CC GO:0009536 plastid IEP Predict GO terms from Neighborhoods
BP GO:0009554 megasporogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009556 microsporogenesis IEP Predict GO terms from Neighborhoods
MF GO:0009975 cyclase activity IEP Predict GO terms from Neighborhoods
BP GO:0010259 multicellular organism aging IEP Predict GO terms from Neighborhoods
BP GO:0010467 gene expression IEP Predict GO terms from Neighborhoods
MF GO:0015171 amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015173 aromatic amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015174 basic amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015179 L-amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015189 L-lysine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015203 polyamine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015450 protein-transporting ATPase activity IEP Predict GO terms from Neighborhoods
BP GO:0015801 aromatic amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015802 basic amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015807 L-amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015839 cadaverine transport IEP Predict GO terms from Neighborhoods
BP GO:0015846 polyamine transport IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016289 CoA hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0016553 base conversion or substitution editing IEP Predict GO terms from Neighborhoods
BP GO:0016554 cytidine to uridine editing IEP Predict GO terms from Neighborhoods
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predict GO terms from Neighborhoods
MF GO:0016849 phosphorus-oxygen lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0019320 hexose catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019388 galactose catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019586 galacturonate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019838 growth factor binding IEP Predict GO terms from Neighborhoods
BP GO:0030517 negative regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0030587 sorocarp development IEP Predict GO terms from Neighborhoods
BP GO:0030970 retrograde protein transport, ER to cytosol IEP Predict GO terms from Neighborhoods
BP GO:0031204 post-translational protein targeting to membrane, translocation IEP Predict GO terms from Neighborhoods
CC GO:0031205 endoplasmic reticulum Sec complex IEP Predict GO terms from Neighborhoods
BP GO:0031425 chloroplast RNA processing IEP Predict GO terms from Neighborhoods
CC GO:0032009 early phagosome IEP Predict GO terms from Neighborhoods
BP GO:0032119 sequestering of zinc ion IEP Predict GO terms from Neighborhoods
CC GO:0032420 stereocilium IEP Predict GO terms from Neighborhoods
BP GO:0033299 secretion of lysosomal enzymes IEP Predict GO terms from Neighborhoods
BP GO:0033481 galacturonate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0033612 receptor serine/threonine kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0034293 sexual sporulation IEP Predict GO terms from Neighborhoods
BP GO:0035315 hair cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0035751 regulation of lysosomal lumen pH IEP Predict GO terms from Neighborhoods
BP GO:0036267 invasive filamentous growth IEP Predict GO terms from Neighborhoods
BP GO:0040009 regulation of growth rate IEP Predict GO terms from Neighborhoods
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042371 vitamin K biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042372 phylloquinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042373 vitamin K metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042374 phylloquinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042490 mechanoreceptor differentiation IEP Predict GO terms from Neighborhoods
BP GO:0042491 inner ear auditory receptor cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0042753 positive regulation of circadian rhythm IEP Predict GO terms from Neighborhoods
CC GO:0042788 polysomal ribosome IEP Predict GO terms from Neighborhoods
CC GO:0044322 endoplasmic reticulum quality control compartment IEP Predict GO terms from Neighborhoods
BP GO:0044572 [4Fe-4S] cluster assembly IEP Predict GO terms from Neighborhoods
BP GO:0044806 G-quadruplex DNA unwinding IEP Predict GO terms from Neighborhoods
BP GO:0045048 protein insertion into ER membrane IEP Predict GO terms from Neighborhoods
BP GO:0046365 monosaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046916 cellular transition metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0046967 cytosol to endoplasmic reticulum transport IEP Predict GO terms from Neighborhoods
BP GO:0048236 plant-type sporogenesis IEP Predict GO terms from Neighborhoods
MF GO:0048408 epidermal growth factor binding IEP Predict GO terms from Neighborhoods
BP GO:0048563 post-embryonic animal organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048658 anther wall tapetum development IEP Predict GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0050378 UDP-glucuronate 4-epimerase activity IEP Predict GO terms from Neighborhoods
BP GO:0050771 negative regulation of axonogenesis IEP Predict GO terms from Neighborhoods
MF GO:0051377 mannose-ethanolamine phosphotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051865 protein autoubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0051880 G-quadruplex DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0055068 cobalt ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055076 transition metal ion homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0060091 kinocilium IEP Predict GO terms from Neighborhoods
BP GO:0060113 inner ear receptor cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0060118 vestibular receptor cell development IEP Predict GO terms from Neighborhoods
BP GO:0060119 inner ear receptor cell development IEP Predict GO terms from Neighborhoods
BP GO:0060122 inner ear receptor cell stereocilium organization IEP Predict GO terms from Neighborhoods
BP GO:0061462 protein localization to lysosome IEP Predict GO terms from Neighborhoods
MF GO:0061522 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity IEP Predict GO terms from Neighborhoods
CC GO:0062039 biofilm matrix IEP Predict GO terms from Neighborhoods
CC GO:0062040 fungal biofilm matrix IEP Predict GO terms from Neighborhoods
BP GO:0062111 zinc ion import into organelle IEP Predict GO terms from Neighborhoods
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0070783 growth of unicellular organism as a thread of attached cells IEP Predict GO terms from Neighborhoods
BP GO:0070861 regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0070863 positive regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0071256 translocon complex IEP Predict GO terms from Neighborhoods
BP GO:0071577 zinc ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0071585 detoxification of cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP Predict GO terms from Neighborhoods
BP GO:0080156 mitochondrial mRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0090399 replicative senescence IEP Predict GO terms from Neighborhoods
BP GO:0097428 protein maturation by iron-sulfur cluster transfer IEP Predict GO terms from Neighborhoods
CC GO:0097732 9+2 non-motile cilium IEP Predict GO terms from Neighborhoods
BP GO:0098655 cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098849 cellular detoxification of cadmium ion IEP Predict GO terms from Neighborhoods
CC GO:0098852 lytic vacuole membrane IEP Predict GO terms from Neighborhoods
BP GO:0099120 socially cooperative development IEP Predict GO terms from Neighborhoods
BP GO:0106035 protein maturation by [4Fe-4S] cluster transfer IEP Predict GO terms from Neighborhoods
BP GO:0140209 zinc ion import into endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0140820 cytosol to Golgi apparatus transport IEP Predict GO terms from Neighborhoods
BP GO:1900425 negative regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1900865 chloroplast RNA modification IEP Predict GO terms from Neighborhoods
BP GO:1902022 L-lysine transport IEP Predict GO terms from Neighborhoods
BP GO:1902047 polyamine transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903401 L-lysine transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903513 endoplasmic reticulum to cytosol transport IEP Predict GO terms from Neighborhoods
BP GO:1903825 organic acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904257 zinc ion import into Golgi lumen IEP Predict GO terms from Neighborhoods
BP GO:1905039 carboxylic acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1990822 basic amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:2000008 regulation of protein localization to cell surface IEP Predict GO terms from Neighborhoods
BP GO:2000010 positive regulation of protein localization to cell surface IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005000 Aldolase/citrate-lyase_domain 89 320
IPR015813 Pyrv/PenolPyrv_Kinase-like_dom 67 329
No external refs found!