SOLTUB.AGRIA.G00000027215

Description : Cysteine synthase

Gene families : OG_02_0010084 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000027215
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_227

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0002376	immune system process	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004124	cysteine synthase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005739	mitochondrion	IEA	AHRD
CC	GO:0005802	trans-Golgi network	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006534	cysteine metabolic process	None	Extended
BP	GO:0006535	cysteine biosynthetic process from serine	IEA	AHRD
BP	GO:0006563	L-serine metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006955	immune response	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009070	serine family amino acid biosynthetic process	None	Extended
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
BP	GO:0009566	fertilization	None	Extended
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEA	AHRD
CC	GO:0009570	chloroplast stroma	IEA	AHRD
BP	GO:0009611	response to wounding	IEA	AHRD
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009835	fruit ripening	None	Extended
BP	GO:0009836	fruit ripening, climacteric	IEA	AHRD
BP	GO:0009860	pollen tube growth	IEA	AHRD
BP	GO:0009932	cell tip growth	None	Extended
CC	GO:0009941	chloroplast envelope	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016846	carbon-sulfur lyase activity	None	Extended
BP	GO:0019344	cysteine biosynthetic process	None	Extended
BP	GO:0019499	cyanide metabolic process	IEA	AHRD
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042802	identical protein binding	IEA	AHRD
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046686	response to cadmium ion	IEA	AHRD
CC	GO:0048046	apoplast	IEA	AHRD
BP	GO:0048468	cell development	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
MF	GO:0050017	L-3-cyanoalanine synthase activity	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080147	root hair cell development	IEA	AHRD
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000304	response to singlet oxygen	IEP	Predict GO terms from Neighborhoods
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0000917	division septum assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0000935	division septum	IEP	Predict GO terms from Neighborhoods
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004123	cystathionine gamma-lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004175	endopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004222	metalloendopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005622	intracellular anatomical structure	IEP	Predict GO terms from Neighborhoods
BP	GO:0006353	DNA-templated transcription termination	IEP	Predict GO terms from Neighborhoods
BP	GO:0006457	protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006828	manganese ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0006996	organelle organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008237	metallopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009507	chloroplast	IEP	Predict GO terms from Neighborhoods
CC	GO:0009509	chromoplast	IEP	Predict GO terms from Neighborhoods
CC	GO:0009527	plastid outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009533	chloroplast stromal thylakoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009536	plastid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009543	chloroplast thylakoid lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0009657	plastid organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009658	chloroplast organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009668	plastid membrane organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0009707	chloroplast outer membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009806	lignan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009807	lignan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009902	chloroplast relocation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009959	negative gravitropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0010019	chloroplast-nucleus signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010020	chloroplast fission	IEP	Predict GO terms from Neighborhoods
BP	GO:0010027	thylakoid membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010206	photosystem II repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0010207	photosystem II assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010270	photosystem II oxygen evolving complex assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015693	magnesium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015979	photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0016043	cellular component organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0016853	isomerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016859	cis-trans isomerase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018208	peptidyl-proline modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019750	chloroplast localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0030091	protein repair	IEP	Predict GO terms from Neighborhoods
CC	GO:0030288	outer membrane-bounded periplasmic space	IEP	Predict GO terms from Neighborhoods
CC	GO:0030428	cell septum	IEP	Predict GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031969	chloroplast membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031977	thylakoid lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0031978	plastid thylakoid lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0032468	Golgi calcium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0032472	Golgi calcium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0032506	cytokinetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0035064	methylated histone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0042026	protein refolding	IEP	Predict GO terms from Neighborhoods
CC	GO:0042170	plastid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0042597	periplasmic space	IEP	Predict GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0043093	FtsZ-dependent cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0043157	response to cation stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0043335	protein unfolding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043572	plastid fission	IEP	Predict GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0044183	protein folding chaperone	IEP	Predict GO terms from Neighborhoods
MF	GO:0044540	L-cystine L-cysteine-lyase (deaminating)	IEP	Predict GO terms from Neighborhoods
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047458	beta-pyrazolylalanine synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048564	photosystem I assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0050234	pyrazolylalanine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050461	L-mimosine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050518	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051258	protein polymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051644	plastid localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051667	establishment of plastid localization	IEP	Predict GO terms from Neighborhoods
CC	GO:0055035	plastid thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0055080	cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060359	response to ammonium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0065003	protein-containing complex assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0070567	cytidylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070588	calcium ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071421	manganese ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071452	cellular response to singlet oxygen	IEP	Predict GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0080144	amino acid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0080145	cysteine homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0080146	L-cysteine desulfhydrase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080183	response to photooxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0090529	cell septum assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0097501	stress response to metal ion	IEP	Predict GO terms from Neighborhoods
MF	GO:0102911	(-)-secoisolariciresinol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140034	methylation-dependent protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1903830	magnesium ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1990170	stress response to cadmium ion	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001926	PLP-dep	190	387
IPR036052	Trypto_synt_PLP_dependent	69	425

External Links

No external refs found!

SOLTUB.AGRIA.G00000027215

Expression Profile

Co-expression Networks

Functional Annotation