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  5. SOLTUB.AGRIA.G00000002839

SOLTUB.AGRIA.G00000002839


Description : RmlC-like cupins superfamily protein


Gene families : OG_02_0000074 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002839
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_52


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEA AHRD
CC GO:0005618 cell wall IEA AHRD
CC GO:0031012 extracellular matrix IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000153 cytoplasmic ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0000326 protein storage vacuole IEP Predict GO terms from Neighborhoods
BP GO:0001101 response to acid chemical IEP Predict GO terms from Neighborhoods
BP GO:0002229 defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:0002239 response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:0002832 negative regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Predict GO terms from Neighborhoods
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004497 monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0004766 spermidine synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Predict GO terms from Neighborhoods
CC GO:0005768 endosome IEP Predict GO terms from Neighborhoods
CC GO:0005802 trans-Golgi network IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006517 protein deglycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006595 polyamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006596 polyamine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006896 Golgi to vacuole transport IEP Predict GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Predict GO terms from Neighborhoods
BP GO:0006970 response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:0008216 spermidine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008295 spermidine biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0008374 O-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009413 response to flooding IEP Predict GO terms from Neighborhoods
BP GO:0009415 response to water IEP Predict GO terms from Neighborhoods
BP GO:0009445 putrescine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009446 putrescine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009617 response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009636 response to toxic substance IEP Predict GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0009696 salicylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009698 phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009699 phenylpropanoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009751 response to salicylic acid IEP Predict GO terms from Neighborhoods
BP GO:0009812 flavonoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009813 flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009820 alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009821 alkaloid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009832 plant-type cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
MF GO:0009922 fatty acid elongase activity IEP Predict GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0010041 response to iron(III) ion IEP Predict GO terms from Neighborhoods
BP GO:0010150 leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:0010507 negative regulation of autophagy IEP Predict GO terms from Neighborhoods
BP GO:0016139 glycoside catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predict GO terms from Neighborhoods
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Predict GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predict GO terms from Neighborhoods
MF GO:0016832 aldehyde-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
CC GO:0017119 Golgi transport complex IEP Predict GO terms from Neighborhoods
BP GO:0018933 nicotine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0018958 phenol-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0018996 molting cycle, collagen and cuticulin-based cuticle IEP Predict GO terms from Neighborhoods
BP GO:0019336 phenol-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019748 secondary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019852 L-ascorbic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019853 L-ascorbic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0030750 putrescine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0031984 organelle subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0032102 negative regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0033075 isoquinoline alkaloid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033076 isoquinoline alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033383 geranyl diphosphate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0033759 flavone synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0033760 2'-deoxymugineic-acid 2'-dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0034785 salicylate 5-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0036507 protein demannosylation IEP Predict GO terms from Neighborhoods
BP GO:0036508 protein alpha-1,2-demannosylation IEP Predict GO terms from Neighborhoods
BP GO:0040039 inductive cell migration IEP Predict GO terms from Neighborhoods
BP GO:0042179 nicotine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Predict GO terms from Neighborhoods
BP GO:0042303 molting cycle IEP Predict GO terms from Neighborhoods
BP GO:0042537 benzene-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042546 cell wall biogenesis IEP Predict GO terms from Neighborhoods
CC GO:0043223 cytoplasmic SCF ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0043668 exine IEP Predict GO terms from Neighborhoods
BP GO:0044088 regulation of vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044265 cellular macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044550 secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045339 farnesyl diphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045910 negative regulation of DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0046244 salicylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046271 phenylpropanoid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046274 lignin catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046593 mandelonitrile lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0047461 (+)-delta-cadinene synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0047517 1,4-beta-D-xylan synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0048442 sepal development IEP Predict GO terms from Neighborhoods
MF GO:0050105 L-gulonolactone oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0050529 polyneuridine-aldehyde esterase activity IEP Predict GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Predict GO terms from Neighborhoods
MF GO:0052577 germacrene-D synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0052636 arabinosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0052716 hydroquinone:oxygen oxidoreductase activity IEP Predict GO terms from Neighborhoods
BP GO:0055001 muscle cell development IEP Predict GO terms from Neighborhoods
BP GO:0055002 striated muscle cell development IEP Predict GO terms from Neighborhoods
CC GO:0055120 striated muscle dense body IEP Predict GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0070417 cellular response to cold IEP Predict GO terms from Neighborhoods
CC GO:0070645 Ubisch body IEP Predict GO terms from Neighborhoods
BP GO:0070887 cellular response to chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071272 morphine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071712 ER-associated misfolded protein catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0071987 WD40-repeat domain binding IEP Predict GO terms from Neighborhoods
MF GO:0080030 methyl indole-3-acetate esterase activity IEP Predict GO terms from Neighborhoods
MF GO:0080031 methyl salicylate esterase activity IEP Predict GO terms from Neighborhoods
MF GO:0080032 methyl jasmonate esterase activity IEP Predict GO terms from Neighborhoods
BP GO:0080167 response to karrikin IEP Predict GO terms from Neighborhoods
BP GO:0090377 seed trichome initiation IEP Predict GO terms from Neighborhoods
BP GO:0090378 seed trichome elongation IEP Predict GO terms from Neighborhoods
BP GO:0090693 plant organ senescence IEP Predict GO terms from Neighborhoods
BP GO:0097237 cellular response to toxic substance IEP Predict GO terms from Neighborhoods
BP GO:0097295 morphine biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0097602 cullin family protein binding IEP Predict GO terms from Neighborhoods
CC GO:0098791 Golgi apparatus subcompartment IEP Predict GO terms from Neighborhoods
MF GO:0102336 3-oxo-arachidoyl-CoA synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0102337 3-oxo-cerotoyl-CoA synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0102338 3-oxo-lignoceronyl-CoA synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0102756 very-long-chain 3-ketoacyl-CoA synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0102802 thebaine 6-O-demethylase activity IEP Predict GO terms from Neighborhoods
MF GO:0102805 codeine O-demethylase activity IEP Predict GO terms from Neighborhoods
MF GO:0120091 jasmonic acid hydrolase IEP Predict GO terms from Neighborhoods
BP GO:1900150 regulation of defense response to fungus IEP Predict GO terms from Neighborhoods
BP GO:1900366 negative regulation of defense response to insect IEP Predict GO terms from Neighborhoods
BP GO:1901334 lactone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901336 lactone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901376 organic heteropentacyclic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901378 organic heteropentacyclic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901615 organic hydroxy compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901926 cadinene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901928 cadinene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901935 beta-caryophyllene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901937 beta-caryophyllene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1904380 endoplasmic reticulum mannose trimming IEP Predict GO terms from Neighborhoods
MF GO:1990444 F-box domain binding IEP Predict GO terms from Neighborhoods
MF GO:1990538 xylan O-acetyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:1990937 xylan acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2000068 regulation of defense response to insect IEP Predict GO terms from Neighborhoods
BP GO:2000785 regulation of autophagosome assembly IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006045 Cupin_1 49 190
IPR011051 RmlC_Cupin_sf 13 197
No external refs found!