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  5. SOLTUB.AGRIA.G00000027954

SOLTUB.AGRIA.G00000027954


Description : Mediator of RNA polymerase II transcription subunit 10


Gene families : OG_02_0010128 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000027954
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_22


Type GO Term Name Evidence Source
CC GO:0000785 chromatin IEA AHRD
MF GO:0003712 transcription coregulator activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0016592 mediator complex IEA AHRD
BP GO:0019827 stem cell population maintenance IEA AHRD
BP GO:0036302 atrioventricular canal development IEA AHRD
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEA AHRD
BP GO:1905072 cardiac jelly development IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predict GO terms from Neighborhoods
CC GO:0000151 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0000329 fungal-type vacuole membrane IEP Predict GO terms from Neighborhoods
CC GO:0000331 contractile vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000421 autophagosome membrane IEP Predict GO terms from Neighborhoods
MF GO:0001091 RNA polymerase II general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
MF GO:0001094 TFIID-class transcription factor complex binding IEP Predict GO terms from Neighborhoods
MF GO:0001098 basal transcription machinery binding IEP Predict GO terms from Neighborhoods
MF GO:0001099 basal RNA polymerase II transcription machinery binding IEP Predict GO terms from Neighborhoods
CC GO:0002178 palmitoyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0002263 cell activation involved in immune response IEP Predict GO terms from Neighborhoods
BP GO:0002366 leukocyte activation involved in immune response IEP Predict GO terms from Neighborhoods
BP GO:0002443 leukocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002902 regulation of B cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0002903 negative regulation of B cell apoptotic process IEP Predict GO terms from Neighborhoods
MF GO:0003779 actin binding IEP Predict GO terms from Neighborhoods
MF GO:0004529 exodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004536 deoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
MF GO:0005521 lamin binding IEP Predict GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Predict GO terms from Neighborhoods
CC GO:0005652 nuclear lamina IEP Predict GO terms from Neighborhoods
CC GO:0005700 polytene chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005826 actomyosin contractile ring IEP Predict GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006625 protein targeting to peroxisome IEP Predict GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006644 phospholipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006665 sphingolipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006684 sphingomyelin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006686 sphingomyelin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006714 sesquiterpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006743 ubiquinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006744 ubiquinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006810 transport IEP Predict GO terms from Neighborhoods
BP GO:0006893 Golgi to plasma membrane transport IEP Predict GO terms from Neighborhoods
BP GO:0006937 regulation of muscle contraction IEP Predict GO terms from Neighborhoods
BP GO:0006940 regulation of smooth muscle contraction IEP Predict GO terms from Neighborhoods
BP GO:0006986 response to unfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0006995 cellular response to nitrogen starvation IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0007031 peroxisome organization IEP Predict GO terms from Neighborhoods
BP GO:0007060 male meiosis chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0007272 ensheathment of neurons IEP Predict GO terms from Neighborhoods
BP GO:0007423 sensory organ development IEP Predict GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Predict GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Predict GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Predict GO terms from Neighborhoods
BP GO:0008366 axon ensheathment IEP Predict GO terms from Neighborhoods
MF GO:0008409 5'-3' exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0008429 phosphatidylethanolamine binding IEP Predict GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009509 chromoplast IEP Predict GO terms from Neighborhoods
BP GO:0009687 abscisic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009688 abscisic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009737 response to abscisic acid IEP Predict GO terms from Neighborhoods
BP GO:0009896 positive regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010032 meiotic chromosome condensation IEP Predict GO terms from Neighborhoods
BP GO:0010222 stem vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010506 regulation of autophagy IEP Predict GO terms from Neighborhoods
BP GO:0010508 positive regulation of autophagy IEP Predict GO terms from Neighborhoods
BP GO:0010770 positive regulation of cell morphogenesis involved in differentiation IEP Predict GO terms from Neighborhoods
CC GO:0012506 vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Predict GO terms from Neighborhoods
MF GO:0015245 fatty acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015908 fatty acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015919 peroxisomal membrane transport IEP Predict GO terms from Neighborhoods
BP GO:0016073 snRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016106 sesquiterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016108 tetraterpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016109 tetraterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016116 carotenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016117 carotenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016119 carotene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016120 carotene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016122 xanthophyll metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016123 xanthophyll biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016180 snRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0016363 nuclear matrix IEP Predict GO terms from Neighborhoods
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0016558 protein import into peroxisome matrix IEP Predict GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016860 intramolecular oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
BP GO:0016925 protein sumoylation IEP Predict GO terms from Neighborhoods
CC GO:0017059 serine C-palmitoyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0019216 regulation of lipid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019789 SUMO transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0022416 chaeta development IEP Predict GO terms from Neighborhoods
CC GO:0030027 lamellipodium IEP Predict GO terms from Neighborhoods
BP GO:0030148 sphingolipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030261 chromosome condensation IEP Predict GO terms from Neighborhoods
CC GO:0030479 actin cortical patch IEP Predict GO terms from Neighborhoods
CC GO:0030659 cytoplasmic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030667 secretory granule membrane IEP Predict GO terms from Neighborhoods
CC GO:0030897 HOPS complex IEP Predict GO terms from Neighborhoods
CC GO:0031143 pseudopodium IEP Predict GO terms from Neighborhoods
CC GO:0031211 endoplasmic reticulum palmitoyltransferase complex IEP Predict GO terms from Neighborhoods
CC GO:0031253 cell projection membrane IEP Predict GO terms from Neighborhoods
CC GO:0031256 leading edge membrane IEP Predict GO terms from Neighborhoods
BP GO:0031331 positive regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031344 regulation of cell projection organization IEP Predict GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Predict GO terms from Neighborhoods
CC GO:0032587 ruffle membrane IEP Predict GO terms from Neighborhoods
BP GO:0032880 regulation of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0033032 regulation of myeloid cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0033033 negative regulation of myeloid cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Predict GO terms from Neighborhoods
MF GO:0033699 DNA 5'-adenosine monophosphate hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0034020 neoxanthin synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0034472 snRNA 3'-end processing IEP Predict GO terms from Neighborhoods
CC GO:0034657 GID complex IEP Predict GO terms from Neighborhoods
BP GO:0035282 segmentation IEP Predict GO terms from Neighborhoods
BP GO:0035285 appendage segmentation IEP Predict GO terms from Neighborhoods
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
CC GO:0035339 SPOTS complex IEP Predict GO terms from Neighborhoods
BP GO:0035493 SNARE complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0036011 imaginal disc-derived leg segmentation IEP Predict GO terms from Neighborhoods
BP GO:0042335 cuticle development IEP Predict GO terms from Neighborhoods
BP GO:0042552 myelination IEP Predict GO terms from Neighborhoods
CC GO:0042579 microbody IEP Predict GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Predict GO terms from Neighborhoods
BP GO:0042981 regulation of apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043001 Golgi to plasma membrane protein transport IEP Predict GO terms from Neighborhoods
BP GO:0043066 negative regulation of apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043069 negative regulation of programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0043288 apocarotenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043289 apocarotenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043299 leukocyte degranulation IEP Predict GO terms from Neighborhoods
BP GO:0043388 positive regulation of DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0043405 regulation of MAP kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0043406 positive regulation of MAP kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0043506 regulation of JUN kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0043507 positive regulation of JUN kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0043574 peroxisomal transport IEP Predict GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044087 regulation of cellular component biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0044255 cellular lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Predict GO terms from Neighborhoods
BP GO:0045055 regulated exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0045132 meiotic chromosome segregation IEP Predict GO terms from Neighborhoods
CC GO:0045177 apical part of cell IEP Predict GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Predict GO terms from Neighborhoods
MF GO:0045436 lycopene beta cyclase activity IEP Predict GO terms from Neighborhoods
BP GO:0045446 endothelial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045498 sex comb development IEP Predict GO terms from Neighborhoods
BP GO:0045833 negative regulation of lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046488 phosphatidylinositol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048814 regulation of dendrite morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048821 erythrocyte development IEP Predict GO terms from Neighborhoods
BP GO:0048822 enucleate erythrocyte development IEP Predict GO terms from Neighborhoods
BP GO:0050773 regulation of dendrite development IEP Predict GO terms from Neighborhoods
BP GO:0050775 positive regulation of dendrite morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Predict GO terms from Neighborhoods
BP GO:0051017 actin filament bundle assembly IEP Predict GO terms from Neighborhoods
BP GO:0051055 negative regulation of lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051179 localization IEP Predict GO terms from Neighborhoods
BP GO:0051180 vitamin transport IEP Predict GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Predict GO terms from Neighborhoods
BP GO:0051299 centrosome separation IEP Predict GO terms from Neighborhoods
BP GO:0051338 regulation of transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Predict GO terms from Neighborhoods
BP GO:0051666 actin cortical patch localization IEP Predict GO terms from Neighborhoods
MF GO:0052727 capsanthin synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0052728 capsorubin synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0060176 regulation of aggregation involved in sorocarp development IEP Predict GO terms from Neighborhoods
BP GO:0060341 regulation of cellular localization IEP Predict GO terms from Neighborhoods
BP GO:0060491 regulation of cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0060548 negative regulation of cell death IEP Predict GO terms from Neighborhoods
BP GO:0061515 myeloid cell development IEP Predict GO terms from Neighborhoods
BP GO:0061572 actin filament bundle organization IEP Predict GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Predict GO terms from Neighborhoods
CC GO:0061645 endocytic patch IEP Predict GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0061744 motor behavior IEP Predict GO terms from Neighborhoods
BP GO:0061951 establishment of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Predict GO terms from Neighborhoods
BP GO:0070228 regulation of lymphocyte apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0070229 negative regulation of lymphocyte apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predict GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Predict GO terms from Neighborhoods
CC GO:0070938 contractile ring IEP Predict GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Predict GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Predict GO terms from Neighborhoods
BP GO:0071763 nuclear membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0071902 positive regulation of protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0072662 protein localization to peroxisome IEP Predict GO terms from Neighborhoods
BP GO:0072663 establishment of protein localization to peroxisome IEP Predict GO terms from Neighborhoods
BP GO:0080051 cutin transport IEP Predict GO terms from Neighborhoods
BP GO:0080172 petal epidermis patterning IEP Predict GO terms from Neighborhoods
BP GO:0090153 regulation of sphingolipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0090155 negative regulation of sphingolipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0090156 cellular sphingolipid homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0090207 regulation of triglyceride metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090209 negative regulation of triglyceride metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090257 regulation of muscle system process IEP Predict GO terms from Neighborhoods
BP GO:0090313 regulation of protein targeting to membrane IEP Predict GO terms from Neighborhoods
BP GO:0090407 organophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0090482 vitamin transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
CC GO:0098590 plasma membrane region IEP Predict GO terms from Neighborhoods
BP GO:0098813 nuclear chromosome segregation IEP Predict GO terms from Neighborhoods
CC GO:0098852 lytic vacuole membrane IEP Predict GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Predict GO terms from Neighborhoods
BP GO:0120032 regulation of plasma membrane bounded cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0120035 regulation of plasma membrane bounded cell projection organization IEP Predict GO terms from Neighborhoods
MF GO:0140296 general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
BP GO:0140352 export from cell IEP Predict GO terms from Neighborhoods
BP GO:0150104 transport across blood-brain barrier IEP Predict GO terms from Neighborhoods
BP GO:1900027 regulation of ruffle assembly IEP Predict GO terms from Neighborhoods
BP GO:1900060 negative regulation of ceramide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900180 regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1900182 positive regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1900483 regulation of protein targeting to vacuolar membrane IEP Predict GO terms from Neighborhoods
BP GO:1901661 quinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901663 quinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902644 tertiary alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902645 tertiary alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903335 regulation of vacuolar transport IEP Predict GO terms from Neighborhoods
BP GO:1903533 regulation of protein targeting IEP Predict GO terms from Neighborhoods
BP GO:1904220 regulation of serine C-palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:1904221 negative regulation of serine C-palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:1905037 autophagosome organization IEP Predict GO terms from Neighborhoods
BP GO:1905038 regulation of membrane lipid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Predict GO terms from Neighborhoods
BP GO:2000106 regulation of leukocyte apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:2000107 negative regulation of leukocyte apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:2000303 regulation of ceramide biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019145 Mediator_Med10 57 170
No external refs found!