SOLTUB.AGRIA.G00000027990

Description : Vacuolar processing enzyme

Gene families : OG_02_0001438 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000027990
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_75

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000027991	No alias	Vacuolar processing enzyme	0.03	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000027991	No alias	Vacuolar processing enzyme	0.03	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000027991	No alias	Vacuolar processing enzyme	0.03	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
CC	GO:0000322	storage vacuole	None	Extended
CC	GO:0000325	plant-type vacuole	None	Extended
CC	GO:0000326	protein storage vacuole	IEA	AHRD
BP	GO:0002376	immune system process	None	Extended
BP	GO:0002478	antigen processing and presentation of exogenous peptide antigen	None	Extended
BP	GO:0002495	antigen processing and presentation of peptide antigen via MHC class II	None	Extended
BP	GO:0002504	antigen processing and presentation of peptide or polysaccharide antigen via MHC class II	None	Extended
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002684	positive regulation of immune system process	None	Extended
BP	GO:0002685	regulation of leukocyte migration	None	Extended
BP	GO:0002687	positive regulation of leukocyte migration	None	Extended
BP	GO:0002688	regulation of leukocyte chemotaxis	None	Extended
BP	GO:0002690	positive regulation of leukocyte chemotaxis	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
BP	GO:0003008	system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004197	cysteine-type endopeptidase activity	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005615	extracellular space	IEA	AHRD
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005768	endosome	None	Extended
CC	GO:0005770	late endosome	IEA	AHRD
CC	GO:0005773	vacuole	None	Extended
CC	GO:0005775	vacuolar lumen	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006624	vacuolar protein processing	IEA	AHRD
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006775	fat-soluble vitamin metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007033	vacuole organization	None	Extended
BP	GO:0007346	regulation of mitotic cell cycle	None	Extended
BP	GO:0007610	behavior	None	Extended
BP	GO:0007611	learning or memory	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0008284	positive regulation of cell population proliferation	IEA	AHRD
BP	GO:0009268	response to pH	None	Extended
CC	GO:0009505	plant-type cell wall	IEA	AHRD
BP	GO:0009611	response to wounding	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEA	AHRD
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009751	response to salicylic acid	IEA	AHRD
BP	GO:0009753	response to jasmonic acid	IEA	AHRD
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010150	leaf senescence	IEA	AHRD
BP	GO:0010214	seed coat development	IEA	AHRD
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010447	response to acidic pH	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010594	regulation of endothelial cell migration	None	Extended
BP	GO:0010595	positive regulation of endothelial cell migration	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	IEA	AHRD
BP	GO:0010632	regulation of epithelial cell migration	None	Extended
BP	GO:0010634	positive regulation of epithelial cell migration	None	Extended
BP	GO:0010646	regulation of cell communication	IEA	AHRD
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0010950	positive regulation of endopeptidase activity	None	Extended
BP	GO:0010952	positive regulation of peptidase activity	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016485	protein processing	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019882	antigen processing and presentation	None	Extended
BP	GO:0019884	antigen processing and presentation of exogenous antigen	None	Extended
BP	GO:0019886	antigen processing and presentation of exogenous peptide antigen via MHC class II	IEA	AHRD
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0023051	regulation of signaling	IEA	AHRD
BP	GO:0030162	regulation of proteolysis	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0030334	regulation of cell migration	None	Extended
BP	GO:0030335	positive regulation of cell migration	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
BP	GO:0031638	zymogen activation	None	Extended
CC	GO:0031904	endosome lumen	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
CC	GO:0031982	vesicle	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032103	positive regulation of response to external stimulus	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0035728	response to hepatocyte growth factor	None	Extended
BP	GO:0035729	cellular response to hepatocyte growth factor stimulus	IEA	AHRD
CC	GO:0036021	endolysosome lumen	IEA	AHRD
BP	GO:0040012	regulation of locomotion	None	Extended
BP	GO:0040017	positive regulation of locomotion	None	Extended
BP	GO:0042127	regulation of cell population proliferation	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042359	vitamin D metabolic process	IEA	AHRD
BP	GO:0042981	regulation of apoptotic process	None	Extended
BP	GO:0043066	negative regulation of apoptotic process	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043069	negative regulation of programmed cell death	None	Extended
BP	GO:0043085	positive regulation of catalytic activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043202	lysosomal lumen	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0043523	regulation of neuron apoptotic process	None	Extended
BP	GO:0043524	negative regulation of neuron apoptotic process	IEA	AHRD
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0045787	positive regulation of cell cycle	None	Extended
BP	GO:0045862	positive regulation of proteolysis	None	Extended
BP	GO:0045931	positive regulation of mitotic cell cycle	IEA	AHRD
BP	GO:0048002	antigen processing and presentation of peptide antigen	None	Extended
CC	GO:0048471	perinuclear region of cytoplasm	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050877	nervous system process	None	Extended
BP	GO:0050890	cognition	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0050920	regulation of chemotaxis	None	Extended
BP	GO:0050921	positive regulation of chemotaxis	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0051336	regulation of hydrolase activity	None	Extended
BP	GO:0051345	positive regulation of hydrolase activity	None	Extended
BP	GO:0051592	response to calcium ion	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	AHRD
BP	GO:0051604	protein maturation	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0052547	regulation of peptidase activity	None	Extended
BP	GO:0052548	regulation of endopeptidase activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060548	negative regulation of cell death	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0070848	response to growth factor	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071241	cellular response to inorganic substance	None	Extended
BP	GO:0071248	cellular response to metal ion	None	Extended
BP	GO:0071277	cellular response to calcium ion	IEA	AHRD
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071363	cellular response to growth factor stimulus	None	Extended
BP	GO:0071417	cellular response to organonitrogen compound	None	Extended
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0071675	regulation of mononuclear cell migration	None	Extended
BP	GO:0071677	positive regulation of mononuclear cell migration	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090025	regulation of monocyte chemotaxis	None	Extended
BP	GO:0090026	positive regulation of monocyte chemotaxis	IEA	AHRD
BP	GO:0090693	plant organ senescence	None	Extended
BP	GO:0097202	activation of cysteine-type endopeptidase activity	IEA	AHRD
BP	GO:0097264	self proteolysis	IEA	AHRD
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901214	regulation of neuron death	None	Extended
BP	GO:1901215	negative regulation of neuron death	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901652	response to peptide	None	Extended
BP	GO:1901653	cellular response to peptide	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901699	cellular response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:1904645	response to amyloid-beta	None	Extended
BP	GO:1904646	cellular response to amyloid-beta	IEA	AHRD
BP	GO:1990019	protein storage vacuole organization	IEA	AHRD
BP	GO:2000116	regulation of cysteine-type endopeptidase activity	None	Extended
BP	GO:2000145	regulation of cell motility	None	Extended
BP	GO:2000147	positive regulation of cell motility	None	Extended
BP	GO:2001026	regulation of endothelial cell chemotaxis	None	Extended
BP	GO:2001028	positive regulation of endothelial cell chemotaxis	IEA	AHRD
BP	GO:2001056	positive regulation of cysteine-type endopeptidase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0003014	renal system process	IEP	Predict GO terms from Neighborhoods
MF	GO:0004650	polygalacturonase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005576	extracellular region	IEP	Predict GO terms from Neighborhoods
CC	GO:0005794	Golgi apparatus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005911	cell-cell junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0005976	polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006073	cellular glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007613	memory	IEP	Predict GO terms from Neighborhoods
BP	GO:0008306	associative learning	IEP	Predict GO terms from Neighborhoods
MF	GO:0008374	O-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009250	glucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009506	plasmodesma	IEP	Predict GO terms from Neighborhoods
BP	GO:0009620	response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009664	plant-type cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009827	plant-type cell wall modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0009856	pollination	IEP	Predict GO terms from Neighborhoods
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010393	galacturonan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010410	hemicellulose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010581	regulation of starch biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016407	acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016413	O-acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0019863	IgE binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019865	immunoglobulin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0030054	cell junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0030243	cellulose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030244	cellulose biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031012	extracellular matrix	IEP	Predict GO terms from Neighborhoods
BP	GO:0032801	receptor catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0040014	regulation of multicellular organism growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0040015	negative regulation of multicellular organism growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0042545	cell wall modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0042546	cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0043112	receptor metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0043667	pollen wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044042	glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045454	cell redox homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0045488	pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045489	pectin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045491	xylan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045730	respiratory burst	IEP	Predict GO terms from Neighborhoods
MF	GO:0047911	galacturan 1,4-alpha-galacturonidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0048046	apoplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0048544	recognition of pollen	IEP	Predict GO terms from Neighborhoods
BP	GO:0050806	positive regulation of synaptic transmission	IEP	Predict GO terms from Neighborhoods
BP	GO:0051273	beta-glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0060320	rejection of self pollen	IEP	Predict GO terms from Neighborhoods
CC	GO:0070161	anchoring junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0097061	dendritic spine organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0099173	postsynapse organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0106027	neuron projection organization	IEP	Predict GO terms from Neighborhoods
BP	GO:1900271	regulation of long-term synaptic potentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1900273	positive regulation of long-term synaptic potentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1900618	regulation of shoot system morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901184	regulation of ERBB signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1901185	negative regulation of ERBB signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1901371	regulation of leaf morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2000122	negative regulation of stomatal complex development	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001096	Peptidase_C13	39	288

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SOLTUB.AGRIA.G00000027990

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation