Description : Arginine/serine-rich splicing factor, putative
Gene families : OG_02_0015999 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028375 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_206 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000027 | ribosomal large subunit assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000243 | commitment complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000380 | alternative mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000395 | mRNA 5'-splice site recognition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000785 | chromatin | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000791 | euchromatin | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001091 | RNA polymerase II general transcription initiation factor binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001093 | TFIIB-class transcription factor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002244 | hematopoietic progenitor cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003012 | muscle system process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003691 | double-stranded telomeric DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004000 | adenosine deaminase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004659 | prenyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004661 | protein geranylgeranyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004663 | Rab geranylgeranyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005539 | glycosaminoglycan binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005730 | nucleolus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005737 | cytoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005968 | Rab-protein geranylgeranyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006241 | CTP biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006376 | mRNA splice site selection | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006400 | tRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006936 | muscle contraction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006941 | striated muscle contraction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007094 | mitotic spindle assembly checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007275 | multicellular organism development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007417 | central nervous system development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008033 | tRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008097 | 5S rRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008201 | heparin binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008251 | tRNA-specific adenosine deaminase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008318 | protein prenyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008608 | attachment of spindle microtubules to kinetochore | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009147 | pyrimidine nucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009148 | pyrimidine nucleoside triphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009208 | pyrimidine ribonucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009209 | pyrimidine ribonucleoside triphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009218 | pyrimidine ribonucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009220 | pyrimidine ribonucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009245 | lipid A biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009790 | embryo development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009793 | embryo development ending in seed dormancy | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010272 | response to silver ion | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010445 | nuclear dicing body | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016106 | sesquiterpenoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016584 | obsolete nucleosome positioning | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016604 | nuclear body | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016607 | nuclear speck | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018342 | protein prenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018344 | protein geranylgeranylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019221 | cytokine-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019239 | deaminase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019840 | isoprenoid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021675 | nerve development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0023019 | signal transduction involved in regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030154 | cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030261 | chromosome condensation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030628 | pre-mRNA 3'-splice site binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031053 | primary miRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031109 | microtubule polymerization or depolymerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031119 | tRNA pseudouridine synthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031491 | nucleosome binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031492 | nucleosomal DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031577 | spindle checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031936 | obsolete negative regulation of chromatin silencing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032116 | SMC loading complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032239 | regulation of nucleobase-containing compound transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032241 | positive regulation of nucleobase-containing compound transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032943 | mononuclear cell proliferation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033046 | negative regulation of sister chromatid segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033047 | regulation of mitotic sister chromatid segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033048 | negative regulation of mitotic sister chromatid segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033119 | negative regulation of RNA splicing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034003 | vetispiradiene synthase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034005 | germacrene-A synthase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034086 | maintenance of sister chromatid cohesion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034088 | maintenance of mitotic sister chromatid cohesion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035061 | interchromatin granule | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035101 | FACT complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035145 | exon-exon junction complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035195 | miRNA-mediated gene silencing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042162 | telomeric DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043047 | single-stranded telomeric DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043484 | regulation of RNA splicing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043529 | GET complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044182 | filamentous growth of a population of unicellular organisms | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0044547 | DNA topoisomerase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045339 | farnesyl diphosphate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045839 | negative regulation of mitotic nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045841 | negative regulation of mitotic metaphase/anaphase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045910 | negative regulation of DNA recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046036 | CTP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046493 | lipid A metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046651 | lymphocyte proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046785 | microtubule polymerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046824 | positive regulation of nucleocytoplasmic transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046831 | regulation of RNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046833 | positive regulation of RNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046898 | response to cycloheximide | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047461 | (+)-delta-cadinene synthase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048025 | negative regulation of mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048255 | mRNA stabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048358 | mucilage pectin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048442 | sepal development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048856 | anatomical structure development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050686 | negative regulation of mRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050733 | RS domain binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051512 | positive regulation of unidimensional cell growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051784 | negative regulation of nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051985 | negative regulation of chromosome segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060048 | cardiac muscle contraction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061138 | morphogenesis of a branching epithelium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070661 | leukocyte proliferation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071004 | U2-type prespliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071010 | prespliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071173 | spindle assembly checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071174 | mitotic spindle checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071217 | cellular response to external biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071920 | cleavage body | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0089701 | U2AF complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090377 | seed trichome initiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097354 | prenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097400 | interleukin-17-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0098847 | sequence-specific single stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0102698 | 5-epi-aristolochene synthase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0110012 | protein localization to P-body | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902100 | negative regulation of metaphase/anaphase transition of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902183 | regulation of shoot apical meristem development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905819 | negative regulation of chromosome separation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990047 | spindle matrix | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990481 | mRNA pseudouridine synthesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000816 | negative regulation of mitotic sister chromatid separation | IEP | Predict GO terms from Neighborhoods |
| No external refs found! |