SOLTUB.AGRIA.G00000028431


Description : RECQ helicase L2


Gene families : OG_02_0021713 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028431
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_10


Type GO Term Name Evidence Source
BP GO:0000077 DNA damage checkpoint signaling IEA AHRD
CC GO:0000228 nuclear chromosome IEA AHRD
BP GO:0000278 mitotic cell cycle IEA AHRD
MF GO:0000403 Y-form DNA binding IEA AHRD
BP GO:0000712 resolution of meiotic recombination intermediates IEA AHRD
BP GO:0000723 telomere maintenance IEA AHRD
BP GO:0000731 DNA synthesis involved in DNA repair IEA AHRD
BP GO:0000732 strand displacement IEA AHRD
CC GO:0000781 chromosome, telomeric region IEA AHRD
MF GO:0000993 RNA polymerase II complex binding IEA AHRD
CC GO:0001673 male germ cell nucleus IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006268 DNA unwinding involved in DNA replication IEA AHRD
BP GO:0006303 double-strand break repair via nonhomologous end joining IEA AHRD
MF GO:0008270 zinc ion binding IEA AHRD
BP GO:0008340 determination of adult lifespan IEA AHRD
MF GO:0009378 four-way junction helicase activity IEA AHRD
BP GO:0009432 SOS response IEA AHRD
CC GO:0009506 plasmodesma IEA AHRD
BP GO:0010165 response to X-ray IEA AHRD
BP GO:0010705 meiotic DNA double-strand break processing involved in reciprocal meiotic recombination IEA AHRD
CC GO:0016591 RNA polymerase II, holoenzyme IEA AHRD
CC GO:0016592 mediator complex IEA AHRD
MF GO:0016787 hydrolase activity IEA AHRD
MF GO:0017116 single-stranded DNA helicase activity IEA AHRD
CC GO:0017117 single-stranded DNA-dependent ATP-dependent DNA helicase complex IEA AHRD
CC GO:0030894 replisome IEA AHRD
BP GO:0031297 replication fork processing IEA AHRD
BP GO:0034244 negative regulation of transcription elongation by RNA polymerase II IEA AHRD
MF GO:0036310 ATP-dependent DNA/DNA annealing activity IEA AHRD
BP GO:0042631 cellular response to water deprivation IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
MF GO:0043138 3'-5' DNA helicase activity IEA AHRD
CC GO:0043590 bacterial nucleoid IEA AHRD
BP GO:0044806 G-quadruplex DNA unwinding IEA AHRD
BP GO:0045003 double-strand break repair via synthesis-dependent strand annealing IEA AHRD
CC GO:0045120 pronucleus IEA AHRD
BP GO:0045950 negative regulation of mitotic recombination IEA AHRD
BP GO:0046632 alpha-beta T cell differentiation IEA AHRD
BP GO:0046641 positive regulation of alpha-beta T cell proliferation IEA AHRD
BP GO:0051098 regulation of binding IEA AHRD
BP GO:0051260 protein homooligomerization IEA AHRD
MF GO:0051880 G-quadruplex DNA binding IEA AHRD
BP GO:0070244 negative regulation of thymocyte apoptotic process IEA AHRD
BP GO:0070417 cellular response to cold IEA AHRD
BP GO:0071139 resolution of recombination intermediates IEA AHRD
BP GO:0071215 cellular response to abscisic acid stimulus IEA AHRD
BP GO:0090329 regulation of DNA-templated DNA replication IEA AHRD
BP GO:1901291 negative regulation of double-strand break repair via single-strand annealing IEA AHRD
BP GO:1901699 cellular response to nitrogen compound IEA AHRD
BP GO:1905168 positive regulation of double-strand break repair via homologous recombination IEA AHRD
BP GO:1990414 replication-born double-strand break repair via sister chromatid exchange IEA AHRD
BP GO:1990918 double-strand break repair involved in meiotic recombination IEA AHRD
Type GO Term Name Evidence Source
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predict GO terms from Neighborhoods
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!