1. Home
  2. Species
  3. Solanum tuberosum Agria
  4. Sequence
  5. SOLTUB.AGRIA.G00000028822

SOLTUB.AGRIA.G00000028822


Description : VQ motif-containing protein


Gene families : OG_02_0020622 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028822
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_134


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
BP GO:0006875 cellular metal ion homeostasis IEA AHRD
BP GO:0009960 endosperm development IEA AHRD
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEA AHRD
CC GO:0043078 polar nucleus IEA AHRD
BP GO:0080113 regulation of seed growth IEA AHRD
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000083 regulation of transcription involved in G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
CC GO:0000228 nuclear chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000307 cyclin-dependent protein kinase holoenzyme complex IEP Predict GO terms from Neighborhoods
BP GO:0000414 regulation of histone H3-K36 methylation IEP Predict GO terms from Neighborhoods
BP GO:0000416 positive regulation of histone H3-K36 methylation IEP Predict GO terms from Neighborhoods
CC GO:0000793 condensed chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000794 condensed nuclear chromosome IEP Predict GO terms from Neighborhoods
MF GO:0000993 RNA polymerase II complex binding IEP Predict GO terms from Neighborhoods
MF GO:0001098 basal transcription machinery binding IEP Predict GO terms from Neighborhoods
MF GO:0001099 basal RNA polymerase II transcription machinery binding IEP Predict GO terms from Neighborhoods
BP GO:0001833 inner cell mass cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0001843 neural tube closure IEP Predict GO terms from Neighborhoods
BP GO:0001932 regulation of protein phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0002039 p53 binding IEP Predict GO terms from Neighborhoods
BP GO:0002574 thrombocyte differentiation IEP Predict GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004674 protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005381 iron ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005743 mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0005768 endosome IEP Predict GO terms from Neighborhoods
CC GO:0005771 multivesicular body IEP Predict GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006622 protein targeting to lysosome IEP Predict GO terms from Neighborhoods
BP GO:0006623 protein targeting to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0006826 iron ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006862 nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0007032 endosome organization IEP Predict GO terms from Neighborhoods
BP GO:0007034 vacuolar transport IEP Predict GO terms from Neighborhoods
BP GO:0007041 lysosomal transport IEP Predict GO terms from Neighborhoods
BP GO:0007059 chromosome segregation IEP Predict GO terms from Neighborhoods
MF GO:0008022 protein C-terminus binding IEP Predict GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Predict GO terms from Neighborhoods
CC GO:0008024 cyclin/CDK positive transcription elongation factor complex IEP Predict GO terms from Neighborhoods
BP GO:0008333 endosome to lysosome transport IEP Predict GO terms from Neighborhoods
MF GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0009292 horizontal gene transfer IEP Predict GO terms from Neighborhoods
BP GO:0009294 DNA-mediated transformation IEP Predict GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010324 membrane invagination IEP Predict GO terms from Neighborhoods
BP GO:0010337 regulation of salicylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0010640 regulation of platelet-derived growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010642 negative regulation of platelet-derived growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010971 positive regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
CC GO:0012506 vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Predict GO terms from Neighborhoods
MF GO:0015093 ferrous iron transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015695 organic cation transport IEP Predict GO terms from Neighborhoods
BP GO:0015748 organophosphate ester transport IEP Predict GO terms from Neighborhoods
BP GO:0015805 S-adenosyl-L-methionine transport IEP Predict GO terms from Neighborhoods
BP GO:0015865 purine nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0016197 endosomal transport IEP Predict GO terms from Neighborhoods
BP GO:0016236 macroautophagy IEP Predict GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0016525 negative regulation of angiogenesis IEP Predict GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predict GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0017157 regulation of exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0019220 regulation of phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019722 calcium-mediated signaling IEP Predict GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Predict GO terms from Neighborhoods
CC GO:0019908 nuclear cyclin-dependent protein kinase holoenzyme complex IEP Predict GO terms from Neighborhoods
BP GO:0030097 hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:0030099 myeloid cell differentiation IEP Predict GO terms from Neighborhoods
CC GO:0030141 secretory granule IEP Predict GO terms from Neighborhoods
CC GO:0030659 cytoplasmic vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0030947 regulation of vascular endothelial growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030948 negative regulation of vascular endothelial growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0031062 positive regulation of histone methylation IEP Predict GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031347 regulation of defense response IEP Predict GO terms from Neighborhoods
BP GO:0031399 regulation of protein modification process IEP Predict GO terms from Neighborhoods
CC GO:0031410 cytoplasmic vesicle IEP Predict GO terms from Neighborhoods
MF GO:0031493 obsolete nucleosomal histone binding IEP Predict GO terms from Neighborhoods
BP GO:0031663 lipopolysaccharide-mediated signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
CC GO:0031982 vesicle IEP Predict GO terms from Neighborhoods
CC GO:0031983 vesicle lumen IEP Predict GO terms from Neighborhoods
BP GO:0032101 regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Predict GO terms from Neighborhoods
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
BP GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
BP GO:0032784 regulation of DNA-templated transcription elongation IEP Predict GO terms from Neighborhoods
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Predict GO terms from Neighborhoods
CC GO:0032806 carboxy-terminal domain protein kinase complex IEP Predict GO terms from Neighborhoods
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
CC GO:0033565 ESCRT-0 complex IEP Predict GO terms from Neighborhoods
MF GO:0034211 GTP-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Predict GO terms from Neighborhoods
BP GO:0034755 iron ion transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:0034774 secretory granule lumen IEP Predict GO terms from Neighborhoods
BP GO:0035148 tube formation IEP Predict GO terms from Neighborhoods
BP GO:0035162 embryonic hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:0036257 multivesicular body organization IEP Predict GO terms from Neighborhoods
BP GO:0036258 multivesicular body assembly IEP Predict GO terms from Neighborhoods
CC GO:0036452 ESCRT complex IEP Predict GO terms from Neighborhoods
BP GO:0042325 regulation of phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0043122 regulation of I-kappaB kinase/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Predict GO terms from Neighborhoods
MF GO:0043175 RNA polymerase core enzyme binding IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0043249 erythrocyte maturation IEP Predict GO terms from Neighborhoods
BP GO:0043328 protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
BP GO:0043388 positive regulation of DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0043405 regulation of MAP kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0043922 negative regulation by host of viral transcription IEP Predict GO terms from Neighborhoods
BP GO:0043966 histone H3 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0043967 histone H4 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0043983 histone H4-K12 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0044154 histone H3-K14 acetylation IEP Predict GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predict GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0045292 mRNA cis splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0045324 late endosome to vacuole transport IEP Predict GO terms from Neighborhoods
BP GO:0045765 regulation of angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045921 positive regulation of exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0045931 positive regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0046425 regulation of receptor signaling pathway via JAK-STAT IEP Predict GO terms from Neighborhoods
BP GO:0046426 negative regulation of receptor signaling pathway via JAK-STAT IEP Predict GO terms from Neighborhoods
BP GO:0046755 viral budding IEP Predict GO terms from Neighborhoods
BP GO:0046777 protein autophosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0046984 regulation of hemoglobin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046985 positive regulation of hemoglobin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0048250 iron import into the mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0048364 root development IEP Predict GO terms from Neighborhoods
BP GO:0048469 cell maturation IEP Predict GO terms from Neighborhoods
BP GO:0048515 spermatid differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048534 hematopoietic or lymphoid organ development IEP Predict GO terms from Neighborhoods
BP GO:0048568 embryonic organ development IEP Predict GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048609 multicellular organismal reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0048871 multicellular organismal homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0050727 regulation of inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0051047 positive regulation of secretion IEP Predict GO terms from Neighborhoods
BP GO:0051099 positive regulation of binding IEP Predict GO terms from Neighborhoods
BP GO:0051101 regulation of DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0051174 regulation of phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051247 positive regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051365 cellular response to potassium ion starvation IEP Predict GO terms from Neighborhoods
BP GO:0051503 adenine nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0051851 modulation by host of symbiont process IEP Predict GO terms from Neighborhoods
BP GO:0055072 iron ion homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0060205 cytoplasmic vesicle lumen IEP Predict GO terms from Neighborhoods
BP GO:0060586 multicellular organismal iron ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060606 tube closure IEP Predict GO terms from Neighborhoods
BP GO:0061462 protein localization to lysosome IEP Predict GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
MF GO:0070063 RNA polymerase binding IEP Predict GO terms from Neighborhoods
MF GO:0070577 lysine-acetylated histone binding IEP Predict GO terms from Neighborhoods
CC GO:0071682 endocytic vesicle lumen IEP Predict GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Predict GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Predict GO terms from Neighborhoods
BP GO:0071985 multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
BP GO:0072348 sulfur compound transport IEP Predict GO terms from Neighborhoods
BP GO:0072666 establishment of protein localization to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0080001 mucilage extrusion from seed coat IEP Predict GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080140 regulation of jasmonic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080141 regulation of jasmonic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080142 regulation of salicylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0090287 regulation of cellular response to growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0090288 negative regulation of cellular response to growth factor stimulus IEP Predict GO terms from Neighborhoods
CC GO:0097013 phagocytic vesicle lumen IEP Predict GO terms from Neighborhoods
CC GO:0097708 intracellular vesicle IEP Predict GO terms from Neighborhoods
MF GO:0099122 RNA polymerase II C-terminal domain binding IEP Predict GO terms from Neighborhoods
MF GO:0106140 P-TEFb complex binding IEP Predict GO terms from Neighborhoods
MF GO:0140030 modification-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140033 acetylation-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140035 ubiquitination-like modification-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140036 ubiquitin-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:1900424 regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1901342 regulation of vasculature development IEP Predict GO terms from Neighborhoods
BP GO:1901343 negative regulation of vasculature development IEP Predict GO terms from Neighborhoods
BP GO:1901407 regulation of phosphorylation of RNA polymerase II C-terminal domain IEP Predict GO terms from Neighborhoods
BP GO:1901976 regulation of cell cycle checkpoint IEP Predict GO terms from Neighborhoods
BP GO:1901977 negative regulation of cell cycle checkpoint IEP Predict GO terms from Neighborhoods
BP GO:1901989 positive regulation of cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901992 positive regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902456 regulation of stomatal opening IEP Predict GO terms from Neighborhoods
BP GO:1902458 positive regulation of stomatal opening IEP Predict GO terms from Neighborhoods
CC GO:1902554 serine/threonine protein kinase complex IEP Predict GO terms from Neighborhoods
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902751 positive regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Predict GO terms from Neighborhoods
BP GO:1903335 regulation of vacuolar transport IEP Predict GO terms from Neighborhoods
BP GO:1903532 positive regulation of secretion by cell IEP Predict GO terms from Neighborhoods
BP GO:1903541 regulation of exosomal secretion IEP Predict GO terms from Neighborhoods
BP GO:1903543 positive regulation of exosomal secretion IEP Predict GO terms from Neighborhoods
CC GO:1904813 ficolin-1-rich granule lumen IEP Predict GO terms from Neighborhoods
BP GO:1904892 regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1904893 negative regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1990542 mitochondrial transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:2000001 regulation of DNA damage checkpoint IEP Predict GO terms from Neighborhoods
BP GO:2000002 negative regulation of DNA damage checkpoint IEP Predict GO terms from Neighborhoods
BP GO:2000181 negative regulation of blood vessel morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2001021 negative regulation of response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
BP GO:2001253 regulation of histone H3-K36 trimethylation IEP Predict GO terms from Neighborhoods
BP GO:2001255 positive regulation of histone H3-K36 trimethylation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008889 VQ 44 69
No external refs found!