Description : tRNA-dihydrouridine(16/17) synthase [NAD (P)(+)]-like protein
Gene families : OG_02_0016201 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028865 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_254 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000171 | ribonuclease MRP activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000172 | ribonuclease MRP complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000447 | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000463 | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000470 | maturation of LSU-rRNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000478 | endonucleolytic cleavage involved in rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000479 | endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000974 | Prp19 complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001889 | liver development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002757 | immune response-activating signal transduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002758 | innate immune response-activating signal transduction | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003729 | mRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004519 | endonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004521 | endoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004540 | ribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005730 | nucleolus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006351 | DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008097 | 5S rRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009299 | mRNA transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009911 | positive regulation of flower development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010090 | trichome morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010091 | trichome branching | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010228 | vegetative to reproductive phase transition of meristem | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0015934 | large ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019843 | rRNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0022625 | cytosolic large ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031099 | regeneration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031100 | animal organ regeneration | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031672 | A band | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032502 | developmental process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042788 | polysomal ribosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048438 | floral whorl development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048467 | gynoecium development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048577 | negative regulation of short-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048579 | negative regulation of long-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048586 | regulation of long-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048587 | regulation of short-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048732 | gland development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071013 | catalytic step 2 spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097421 | liver regeneration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902555 | endoribonuclease complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1905348 | endonuclease complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |