SOLTUB.AGRIA.G00000028876


Description : Beta-amylase


Gene families : OG_02_0002661 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028876
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_264


Type GO Term Name Evidence Source
BP GO:0000024 maltose biosynthetic process IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0005983 starch catabolic process IEA AHRD
BP GO:0009409 response to cold IEA AHRD
BP GO:0009414 response to water deprivation IEA AHRD
CC GO:0009570 chloroplast stroma IEA AHRD
MF GO:0016161 beta-amylase activity IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
BP GO:0048831 regulation of shoot system development IEA AHRD
BP GO:0080027 response to herbivore IEA AHRD
MF GO:0102229 amylopectin maltohydrolase activity IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000153 cytoplasmic ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0000323 lytic vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000324 fungal-type vacuole IEP Predict GO terms from Neighborhoods
BP GO:0000373 Group II intron splicing IEP Predict GO terms from Neighborhoods
BP GO:0000460 maturation of 5.8S rRNA IEP Predict GO terms from Neighborhoods
CC GO:0000803 sex chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000806 Y chromosome IEP Predict GO terms from Neighborhoods
CC GO:0001520 outer dense fiber IEP Predict GO terms from Neighborhoods
BP GO:0001656 metanephros development IEP Predict GO terms from Neighborhoods
CC GO:0001669 acrosomal vesicle IEP Predict GO terms from Neighborhoods
BP GO:0001678 cellular glucose homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0001906 cell killing IEP Predict GO terms from Neighborhoods
BP GO:0001909 leukocyte mediated cytotoxicity IEP Predict GO terms from Neighborhoods
BP GO:0001913 T cell mediated cytotoxicity IEP Predict GO terms from Neighborhoods
BP GO:0002250 adaptive immune response IEP Predict GO terms from Neighborhoods
BP GO:0002443 leukocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002449 lymphocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002456 T cell mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002460 adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains IEP Predict GO terms from Neighborhoods
MF GO:0003844 1,4-alpha-glucan branching enzyme activity IEP Predict GO terms from Neighborhoods
MF GO:0004097 catechol oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004177 aminopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004180 carboxypeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004185 serine-type carboxypeptidase activity IEP Predict GO terms from Neighborhoods
CC GO:0005767 secondary lysosome IEP Predict GO terms from Neighborhoods
CC GO:0005930 axoneme IEP Predict GO terms from Neighborhoods
BP GO:0005977 glycogen metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005978 glycogen biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006112 energy reserve metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Predict GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008656 cysteine-type endopeptidase activator activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
CC GO:0009501 amyloplast IEP Predict GO terms from Neighborhoods
CC GO:0009536 plastid IEP Predict GO terms from Neighborhoods
BP GO:0009744 response to sucrose IEP Predict GO terms from Neighborhoods
BP GO:0009746 response to hexose IEP Predict GO terms from Neighborhoods
BP GO:0009749 response to glucose IEP Predict GO terms from Neighborhoods
BP GO:0009806 lignan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009807 lignan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009953 dorsal/ventral pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010021 amylopectin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predict GO terms from Neighborhoods
BP GO:0010634 positive regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010813 neuropeptide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010815 bradykinin catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010952 positive regulation of peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0015020 glucuronosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016073 snRNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016165 linoleate 13S-lipoxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0016180 snRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0016504 peptidase activator activity IEP Predict GO terms from Neighborhoods
MF GO:0016505 peptidase activator activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0019252 starch biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019882 antigen processing and presentation IEP Predict GO terms from Neighborhoods
MF GO:0030108 HLA-A specific activating MHC class I receptor activity IEP Predict GO terms from Neighborhoods
CC GO:0030891 VCB complex IEP Predict GO terms from Neighborhoods
MF GO:0030984 kininogen binding IEP Predict GO terms from Neighborhoods
BP GO:0031125 rRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031638 zymogen activation IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
CC GO:0031983 vesicle lumen IEP Predict GO terms from Neighborhoods
CC GO:0032010 phagolysosome IEP Predict GO terms from Neighborhoods
MF GO:0032393 MHC class I receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0032397 activating MHC class I receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0032526 response to retinoic acid IEP Predict GO terms from Neighborhoods
BP GO:0033619 membrane protein proteolysis IEP Predict GO terms from Neighborhoods
MF GO:0033793 aureusidin synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0034284 response to monosaccharide IEP Predict GO terms from Neighborhoods
BP GO:0034285 response to disaccharide IEP Predict GO terms from Neighborhoods
BP GO:0034389 lipid droplet organization IEP Predict GO terms from Neighborhoods
BP GO:0034472 snRNA 3'-end processing IEP Predict GO terms from Neighborhoods
CC GO:0034774 secretory granule lumen IEP Predict GO terms from Neighborhoods
CC GO:0035770 ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
CC GO:0036019 endolysosome IEP Predict GO terms from Neighborhoods
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
CC GO:0042599 lamellar body IEP Predict GO terms from Neighborhoods
CC GO:0042718 yolk granule IEP Predict GO terms from Neighborhoods
MF GO:0043028 cysteine-type endopeptidase regulator activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043129 surfactant homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0043171 peptide catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0043277 apoptotic cell clearance IEP Predict GO terms from Neighborhoods
BP GO:0043628 small regulatory ncRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0043633 polyadenylation-dependent RNA catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0045169 fusome IEP Predict GO terms from Neighborhoods
BP GO:0045765 regulation of angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045766 positive regulation of angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:0046184 aldehyde biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0046992 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond IEP Predict GO terms from Neighborhoods
MF GO:0046993 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0048875 chemical homeostasis within a tissue IEP Predict GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Predict GO terms from Neighborhoods
CC GO:0060205 cytoplasmic vesicle lumen IEP Predict GO terms from Neighborhoods
BP GO:0060448 dichotomous subdivision of terminal units involved in lung branching IEP Predict GO terms from Neighborhoods
BP GO:0060600 dichotomous subdivision of an epithelial terminal unit IEP Predict GO terms from Neighborhoods
BP GO:0060785 regulation of apoptosis involved in tissue homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060968 obsolete regulation of gene silencing IEP Predict GO terms from Neighborhoods
MF GO:0062131 3-butenylglucosinolate 2-hydroxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0070008 serine-type exopeptidase activity IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
MF GO:0070324 thyroid hormone binding IEP Predict GO terms from Neighborhoods
BP GO:0070371 ERK1 and ERK2 cascade IEP Predict GO terms from Neighborhoods
BP GO:0070613 regulation of protein processing IEP Predict GO terms from Neighborhoods
BP GO:0071071 regulation of phospholipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0071324 cellular response to disaccharide stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071326 cellular response to monosaccharide stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071329 cellular response to sucrose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071331 cellular response to hexose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071332 cellular response to fructose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071333 cellular response to glucose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071368 cellular response to cytokinin stimulus IEP Predict GO terms from Neighborhoods
BP GO:0090351 seedling development IEP Predict GO terms from Neighborhoods
BP GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0097066 response to thyroid hormone IEP Predict GO terms from Neighborhoods
BP GO:0097067 cellular response to thyroid hormone stimulus IEP Predict GO terms from Neighborhoods
CC GO:0097208 alveolar lamellar body IEP Predict GO terms from Neighborhoods
CC GO:0099080 supramolecular complex IEP Predict GO terms from Neighborhoods
MF GO:0102752 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) IEP Predict GO terms from Neighborhoods
MF GO:0140375 immune receptor activity IEP Predict GO terms from Neighborhoods
BP GO:1900366 negative regulation of defense response to insect IEP Predict GO terms from Neighborhoods
BP GO:1900992 (-)-secologanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900994 (-)-secologanin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901259 chloroplast rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:1901342 regulation of vasculature development IEP Predict GO terms from Neighborhoods
BP GO:1901708 (+)-3'-hydroxylarreatricin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901709 (+)-larreatricin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901804 beta-glucoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901806 beta-glucoside biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902395 regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predict GO terms from Neighborhoods
BP GO:1903186 regulation of vitellogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903188 positive regulation of vitellogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903317 regulation of protein maturation IEP Predict GO terms from Neighborhoods
BP GO:1903725 regulation of phospholipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1904018 positive regulation of vasculature development IEP Predict GO terms from Neighborhoods
CC GO:1904813 ficolin-1-rich granule lumen IEP Predict GO terms from Neighborhoods
BP GO:1905582 response to mannose IEP Predict GO terms from Neighborhoods
BP GO:1905691 lipid droplet disassembly IEP Predict GO terms from Neighborhoods
MF GO:1990136 linoleate 9S-lipoxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:1990834 response to odorant IEP Predict GO terms from Neighborhoods
BP GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:2000896 amylopectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2001235 positive regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR017853 Glycoside_hydrolase_SF 81 510
IPR001554 Glyco_hydro_14 86 503
No external refs found!