SOLTUB.AGRIA.G00000029446

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_02_0016325 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029446
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_68

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005874	microtubule	None	Extended
CC	GO:0005881	cytoplasmic microtubule	None	Extended
CC	GO:0005886	plasma membrane	IEA	AHRD
CC	GO:0005929	cilium	IEA	AHRD
BP	GO:0006810	transport	IEA	AHRD
BP	GO:0006996	organelle organization	IEA	AHRD
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007018	microtubule-based movement	IEA	AHRD
BP	GO:0007368	determination of left/right symmetry	IEA	AHRD
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009855	determination of bilateral symmetry	None	Extended
BP	GO:0009860	pollen tube growth	IEA	AHRD
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031347	regulation of defense response	IEA	AHRD
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0035295	tube development	IEA	AHRD
BP	GO:0040007	growth	None	Extended
CC	GO:0042995	cell projection	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	IEA	AHRD
BP	GO:0048513	animal organ development	IEA	AHRD
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	IEA	AHRD
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051640	organelle localization	IEA	AHRD
BP	GO:0051649	establishment of localization in cell	IEA	AHRD
CC	GO:0055028	cortical microtubule	IEA	AHRD
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0099081	supramolecular polymer	None	Extended
CC	GO:0099512	supramolecular fiber	None	Extended
CC	GO:0099513	polymeric cytoskeletal fiber	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000741	karyogamy	IEP	Predict GO terms from Neighborhoods
MF	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IEP	Predict GO terms from Neighborhoods
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001216	DNA-binding transcription activator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IEP	Predict GO terms from Neighborhoods
BP	GO:0001742	oenocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001763	morphogenesis of a branching structure	IEP	Predict GO terms from Neighborhoods
MF	GO:0003779	actin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003785	actin monomer binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005667	transcription regulator complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006997	nucleus organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007379	segment specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0007380	specification of segmental identity, head	IEP	Predict GO terms from Neighborhoods
BP	GO:0007422	peripheral nervous system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007476	imaginal disc-derived wing morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007480	imaginal disc-derived leg morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0008134	transcription factor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008284	positive regulation of cell population proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009608	response to symbiont	IEP	Predict GO terms from Neighborhoods
BP	GO:0009610	response to symbiotic fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009952	anterior/posterior pattern specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0009954	proximal/distal pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009965	leaf morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010051	xylem and phloem pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010074	maintenance of meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010076	maintenance of floral meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010077	maintenance of inflorescence meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010089	xylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010154	fruit development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010197	polar nucleus fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010201	response to continuous far red light stimulus by the high-irradiance response system	IEP	Predict GO terms from Neighborhoods
BP	GO:0010218	response to far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0010223	secondary shoot formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	Predict GO terms from Neighborhoods
BP	GO:0010229	inflorescence development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010346	shoot axis formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010393	galacturonan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010453	regulation of cell fate commitment	IEP	Predict GO terms from Neighborhoods
CC	GO:0015629	actin cytoskeleton	IEP	Predict GO terms from Neighborhoods
CC	GO:0015630	microtubule cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0030902	hindbrain development	IEP	Predict GO terms from Neighborhoods
BP	GO:0034504	protein localization to nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0035107	appendage morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035114	imaginal disc-derived appendage morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035120	post-embryonic appendage morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0040034	regulation of development, heterochronic	IEP	Predict GO terms from Neighborhoods
BP	GO:0042659	regulation of cell fate specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0043408	regulation of MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0043410	positive regulation of MAPK cascade	IEP	Predict GO terms from Neighborhoods
CC	GO:0045171	intercellular bridge	IEP	Predict GO terms from Neighborhoods
BP	GO:0045488	pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045664	regulation of neuron differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0046982	protein heterodimerization activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048284	organelle fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0048363	mucilage pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048457	floral whorl morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048506	regulation of timing of meristematic phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:0048509	regulation of meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEP	Predict GO terms from Neighborhoods
BP	GO:0048735	haltere morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0051015	actin filament binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0060323	head morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060429	epithelium development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061326	renal tubule development	IEP	Predict GO terms from Neighborhoods
BP	GO:0072002	Malpighian tubule development	IEP	Predict GO terms from Neighborhoods
BP	GO:0080006	internode patterning	IEP	Predict GO terms from Neighborhoods
BP	GO:0090567	reproductive shoot system development	IEP	Predict GO terms from Neighborhoods
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1902533	positive regulation of intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:1905393	plant organ formation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000495	regulation of cell proliferation involved in compound eye morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2000497	positive regulation of cell proliferation involved in compound eye morphogenesis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR041617	TPR_MalT	139	285
IPR011990	TPR-like_helical_dom_sf	135	546

External Links

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SOLTUB.AGRIA.G00000029446

Expression Profile

Co-expression Networks

Functional Annotation