SOLTUB.AGRIA.G00000030455


Description : Importin subunit beta-1


Gene families : OG_02_0004077 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000030455
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_248


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEA AHRD
CC GO:0005643 nuclear pore IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006607 NLS-bearing protein import into nucleus IEA AHRD
BP GO:0006610 ribosomal protein import into nucleus IEA AHRD
BP GO:0007079 mitotic chromosome movement towards spindle pole IEA AHRD
BP GO:0007080 mitotic metaphase plate congression IEA AHRD
MF GO:0008139 nuclear localization sequence binding IEA AHRD
CC GO:0010494 cytoplasmic stress granule IEA AHRD
MF GO:0019894 kinesin binding IEA AHRD
MF GO:0019899 enzyme binding IEA AHRD
MF GO:0019904 protein domain specific binding IEA AHRD
CC GO:0030141 secretory granule IEA AHRD
BP GO:0030953 astral microtubule organization IEA AHRD
BP GO:0031291 Ran protein signal transduction IEA AHRD
CC GO:0031965 nuclear membrane IEA AHRD
CC GO:0034399 nuclear periphery IEA AHRD
BP GO:0040001 establishment of mitotic spindle localization IEA AHRD
MF GO:0043167 ion binding IEA AHRD
CC GO:0043186 P granule IEA AHRD
MF GO:0044877 protein-containing complex binding IEA AHRD
MF GO:0051879 Hsp90 protein binding IEA AHRD
BP GO:0060255 regulation of macromolecule metabolic process IEA AHRD
MF GO:0061608 nuclear import signal receptor activity IEA AHRD
MF GO:0061676 importin-alpha family protein binding IEA AHRD
CC GO:0071782 endoplasmic reticulum tubular network IEA AHRD
BP GO:0090307 mitotic spindle assembly IEA AHRD
CC GO:1990023 mitotic spindle midzone IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0000154 rRNA modification IEP Predict GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0000281 mitotic cytokinesis IEP Predict GO terms from Neighborhoods
MF GO:0000287 magnesium ion binding IEP Predict GO terms from Neighborhoods
BP GO:0000460 maturation of 5.8S rRNA IEP Predict GO terms from Neighborhoods
BP GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000470 maturation of LSU-rRNA IEP Predict GO terms from Neighborhoods
CC GO:0000792 heterochromatin IEP Predict GO terms from Neighborhoods
BP GO:0000972 transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery IEP Predict GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Predict GO terms from Neighborhoods
MF GO:0002153 steroid receptor RNA activator RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Predict GO terms from Neighborhoods
MF GO:0003872 6-phosphofructokinase activity IEP Predict GO terms from Neighborhoods
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004839 ubiquitin activating enzyme activity IEP Predict GO terms from Neighborhoods
MF GO:0005049 nuclear export signal receptor activity IEP Predict GO terms from Neighborhoods
CC GO:0005657 replication fork IEP Predict GO terms from Neighborhoods
CC GO:0005721 pericentric heterochromatin IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Predict GO terms from Neighborhoods
CC GO:0005765 lysosomal membrane IEP Predict GO terms from Neighborhoods
BP GO:0006002 fructose 6-phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006090 pyruvate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006304 DNA modification IEP Predict GO terms from Neighborhoods
BP GO:0006305 DNA alkylation IEP Predict GO terms from Neighborhoods
BP GO:0006306 DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0006349 regulation of gene expression by genomic imprinting IEP Predict GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006405 RNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006406 mRNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Predict GO terms from Neighborhoods
BP GO:0006525 arginine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006526 arginine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006591 ornithine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006611 protein export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006757 ATP generation from ADP IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007399 nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0007589 body fluid secretion IEP Predict GO terms from Neighborhoods
BP GO:0007611 learning or memory IEP Predict GO terms from Neighborhoods
BP GO:0007612 learning IEP Predict GO terms from Neighborhoods
BP GO:0007626 locomotory behavior IEP Predict GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008171 O-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008327 methyl-CpG binding IEP Predict GO terms from Neighborhoods
BP GO:0008356 asymmetric cell division IEP Predict GO terms from Neighborhoods
MF GO:0008443 phosphofructokinase activity IEP Predict GO terms from Neighborhoods
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predict GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008650 rRNA (uridine-2'-O-)-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0009008 DNA-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009292 horizontal gene transfer IEP Predict GO terms from Neighborhoods
BP GO:0009294 DNA-mediated transformation IEP Predict GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Predict GO terms from Neighborhoods
BP GO:0009750 response to fructose IEP Predict GO terms from Neighborhoods
BP GO:0009910 negative regulation of flower development IEP Predict GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0010069 zygote asymmetric cytokinesis in embryo sac IEP Predict GO terms from Neighborhoods
BP GO:0010070 zygote asymmetric cell division IEP Predict GO terms from Neighborhoods
BP GO:0010216 maintenance of DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0010288 response to lead ion IEP Predict GO terms from Neighborhoods
BP GO:0010424 DNA methylation on cytosine within a CG sequence IEP Predict GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Predict GO terms from Neighborhoods
BP GO:0015979 photosynthesis IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016073 snRNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016458 obsolete gene silencing IEP Predict GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predict GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predict GO terms from Neighborhoods
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predict GO terms from Neighborhoods
MF GO:0017056 structural constituent of nuclear pore IEP Predict GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0019200 carbohydrate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0019780 FAT10 activating enzyme activity IEP Predict GO terms from Neighborhoods
BP GO:0021764 amygdala development IEP Predict GO terms from Neighborhoods
BP GO:0021766 hippocampus development IEP Predict GO terms from Neighborhoods
MF GO:0030374 nuclear receptor coactivator activity IEP Predict GO terms from Neighborhoods
CC GO:0030684 preribosome IEP Predict GO terms from Neighborhoods
CC GO:0030687 preribosome, large subunit precursor IEP Predict GO terms from Neighborhoods
CC GO:0030867 rough endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0031057 negative regulation of histone modification IEP Predict GO terms from Neighborhoods
BP GO:0031061 negative regulation of histone methylation IEP Predict GO terms from Neighborhoods
BP GO:0031062 positive regulation of histone methylation IEP Predict GO terms from Neighborhoods
CC GO:0031080 nuclear pore outer ring IEP Predict GO terms from Neighborhoods
BP GO:0031119 tRNA pseudouridine synthesis IEP Predict GO terms from Neighborhoods
BP GO:0031120 snRNA pseudouridine synthesis IEP Predict GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Predict GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0031445 regulation of heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0031453 positive regulation of heterochromatin formation IEP Predict GO terms from Neighborhoods
CC GO:0032040 small-subunit processome IEP Predict GO terms from Neighborhoods
BP GO:0032259 methylation IEP Predict GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032776 DNA methylation on cytosine IEP Predict GO terms from Neighborhoods
CC GO:0034388 Pwp2p-containing subcomplex of 90S preribosome IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predict GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Predict GO terms from Neighborhoods
BP GO:0040031 snRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0042450 arginine biosynthetic process via ornithine IEP Predict GO terms from Neighborhoods
BP GO:0043045 DNA methylation involved in embryo development IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043200 response to amino acid IEP Predict GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Predict GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Predict GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044728 DNA methylation or demethylation IEP Predict GO terms from Neighborhoods
BP GO:0046031 ADP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046034 ATP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046835 carbohydrate phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0046939 nucleotide phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0048660 regulation of smooth muscle cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0048661 positive regulation of smooth muscle cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0050657 nucleic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0050658 RNA transport IEP Predict GO terms from Neighborhoods
BP GO:0050878 regulation of body fluid levels IEP Predict GO terms from Neighborhoods
BP GO:0050890 cognition IEP Predict GO terms from Neighborhoods
BP GO:0051028 mRNA transport IEP Predict GO terms from Neighborhoods
BP GO:0051147 regulation of muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0051148 negative regulation of muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0051150 regulation of smooth muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0051151 negative regulation of smooth muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0051168 nuclear export IEP Predict GO terms from Neighborhoods
BP GO:0051236 establishment of RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0051569 regulation of histone H3-K4 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051570 regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051571 positive regulation of histone H3-K4 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051573 negative regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0060996 dendritic spine development IEP Predict GO terms from Neighborhoods
BP GO:0061615 glycolytic process through fructose-6-phosphate IEP Predict GO terms from Neighborhoods
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP Predict GO terms from Neighborhoods
MF GO:0062105 RNA 2'-O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0070848 response to growth factor IEP Predict GO terms from Neighborhoods
BP GO:0071230 cellular response to amino acid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071363 cellular response to growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090308 regulation of DNA methylation-dependent heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0090309 positive regulation of DNA methylation-dependent heterochromatin formation IEP Predict GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Predict GO terms from Neighborhoods
MF GO:0106029 tRNA pseudouridine synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0106032 snRNA pseudouridine synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0120261 regulation of heterochromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0120263 positive regulation of heterochromatin organization IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
BP GO:1900239 regulation of phenotypic switching IEP Predict GO terms from Neighborhoods
BP GO:1900240 negative regulation of phenotypic switching IEP Predict GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901538 changes to DNA methylation involved in embryo development IEP Predict GO terms from Neighborhoods
BP GO:1902275 regulation of chromatin organization IEP Predict GO terms from Neighborhoods
BP GO:1904705 regulation of vascular associated smooth muscle cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:1904707 positive regulation of vascular associated smooth muscle cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:1905063 regulation of vascular associated smooth muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1905064 negative regulation of vascular associated smooth muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1905269 positive regulation of chromatin organization IEP Predict GO terms from Neighborhoods
BP GO:1905915 regulation of cell differentiation involved in phenotypic switching IEP Predict GO terms from Neighborhoods
BP GO:1905916 negative regulation of cell differentiation involved in phenotypic switching IEP Predict GO terms from Neighborhoods
BP GO:1905930 regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching IEP Predict GO terms from Neighborhoods
BP GO:1905931 negative regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching IEP Predict GO terms from Neighborhoods
BP GO:1990481 mRNA pseudouridine synthesis IEP Predict GO terms from Neighborhoods
MF GO:1990841 promoter-specific chromatin binding IEP Predict GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:2001252 positive regulation of chromosome organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 23 103
IPR016024 ARM-type_fold 4 852
No external refs found!